Literature DB >> 4578762

The mechanism of action of beta-galactosidase. Effect of aglycone nature and -deuterium substitution on the hydrolysis of aryl galactosides.

M L Sinnott, I J Souchard.   

Abstract

1. Steady-state kinetic parameters for the beta-galactosidase-catalysed hydrolysis of 13 aryl beta-d-galactopyranosides show no simple dependence on aglycone acidity. 2. alpha-Deuterium kinetic isotope effects (k(H)/k(D)) for seven of these substrates, measured under steady-state conditions with [S]>>K(m), vary from 1.00 for poor substrates to 1.25 for hydrolysis of the galactosyl-enzyme. 3. Methanolysis of the galactosyl-enzyme in 1.5m-methanol increases K(H)/k(D) for degalactosylation, but leaves that for hydrolysis of ;slow' substrates unchanged. 4. These data are incompatible with a simple two-step mechanism. A scheme consisting of a conformation change, liberation of a galactopyranosyl cation in an intimate ion-pair, non-productive but preferential collapse of the ion-pair to a covalent species and reaction of the galactosyl enzyme through the ion-paired form is proposed. 5. This scheme is used to rationalize previously puzzling data about the enzyme mechanism.

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Year:  1973        PMID: 4578762      PMCID: PMC1177673          DOI: 10.1042/bj1330089

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  8 in total

1.  Inhibition of glycosidases by aldonolactones of corresponding configuration. 3. Inhibitors of beta-D-galactosidase.

Authors:  G A LEVVY; A McALLAN; A J HAY
Journal:  Biochem J       Date:  1962-02       Impact factor: 3.857

2.  Reversible alkylation of a methionyl residue near the active site of -galactosidase.

Authors:  F Naider; Z Bohak; J Yariv
Journal:  Biochemistry       Date:  1972-08-15       Impact factor: 3.162

Review 3.  Mechanism of lysozyme action.

Authors:  D M Chipman; N Sharon
Journal:  Science       Date:  1969-08-01       Impact factor: 47.728

4.  Application of secondary alpha-deuterium kinetic isotope effects to studies of enzyme catalysis. Glycoside hydrolysis by lysozyme and beta-glucosidase.

Authors:  F W Dahlquist; T Rand-Meir; M A Raftery
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

5.  Demonstration of carbonium ion intermediate during lysozyme catalysis.

Authors:  F W Dahlquist; T Rand-Meir; M A Raftery
Journal:  Proc Natl Acad Sci U S A       Date:  1968-12       Impact factor: 11.205

6.  Lac repressor.

Authors:  B Müller-Hill
Journal:  Angew Chem Int Ed Engl       Date:  1971-03       Impact factor: 15.336

7.  The effect of methanol and dioxan on the rates of the beta-galactosidase-catalysed hydrolyses of some beta-D-galactrophyranosides: rate-limiting degalactosylation. The ph-dependence of galactosylation and degalactosylation.

Authors:  M L Sinnott; O M Viratelle
Journal:  Biochem J       Date:  1973-05       Impact factor: 3.857

8.  Inhibition of glycosidases by aldonolactones of corresponding configuration. The specificity of alpha-L-arabinosidase.

Authors:  J Conchie; A L Gelman; G A Levvy
Journal:  Biochem J       Date:  1968-01       Impact factor: 3.857

  8 in total
  25 in total

1.  Long-lived glycosyl-enzyme intermediate mimic produced by formate re-activation of a mutant endoglucanase lacking its catalytic nucleophile.

Authors:  J L Viladot; F Canals; X Batllori; A Planas
Journal:  Biochem J       Date:  2001-04-01       Impact factor: 3.857

2.  β-Galactosidase-instructed formation of molecular nanofibers and a hydrogel.

Authors:  Fan Zhao; Christopher S Weitzel; Yuan Gao; Hayley M Browdy; Junfeng Shi; Hsin-Chieh Lin; Susan T Lovett; Bing Xu
Journal:  Nanoscale       Date:  2011-06-02       Impact factor: 7.790

3.  Single molecule assays of beta-galactosidase from two wild-type strains of E. coli: effects of protease inhibitors on microheterogeneity and different relative activities with differing substrates.

Authors:  Ellert R Nichols; Jennilee M A Gavina; Robert G McLeod; Douglas B Craig
Journal:  Protein J       Date:  2007-02       Impact factor: 2.371

4.  Functional properties of beta-galactosidase from mutant strain 13 PO of Escherichia coli.

Authors:  P J Deschavanne; O M Viratelle; J M Yon
Journal:  Proc Natl Acad Sci U S A       Date:  1978-04       Impact factor: 11.205

5.  A solvent-isotope-effect study of proton transfer during catalysis by Escherichia coli (lacZ) beta-galactosidase.

Authors:  T Selwood; M L Sinnott
Journal:  Biochem J       Date:  1990-06-01       Impact factor: 3.857

6.  Catalytic mechanism of a family 3 beta-glucosidase and mutagenesis study on residue Asp-247.

Authors:  Y K Li; J Chir; F Y Chen
Journal:  Biochem J       Date:  2001-05-01       Impact factor: 3.857

7.  On the antiperiplanar lone pair hypothesis and its application to catalysis by glycosidases.

Authors:  M L Sinnott
Journal:  Biochem J       Date:  1984-12-15       Impact factor: 3.857

8.  The beta-galactosidase-catalysed hydrolyses of beta-d-galactopyranosyl pyridium salts. Rate-limiting generation of an enzyme-bound galactopyranosyl cation in a process dependent only on aglycone acidity.

Authors:  M L Sinnott; S G Withers
Journal:  Biochem J       Date:  1974-12       Impact factor: 3.857

9.  The role of magnesium ions in beta-galactosidase hydrolyses. Studies on charge and shape of the beta-galactopyranosyl binding site.

Authors:  G S Case; M L Sinnott; J P Tenu
Journal:  Biochem J       Date:  1973-05       Impact factor: 3.857

10.  The effect of methanol and dioxan on the rates of the beta-galactosidase-catalysed hydrolyses of some beta-D-galactrophyranosides: rate-limiting degalactosylation. The ph-dependence of galactosylation and degalactosylation.

Authors:  M L Sinnott; O M Viratelle
Journal:  Biochem J       Date:  1973-05       Impact factor: 3.857

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