Literature DB >> 9826605

Noncontact dipole effects on channel permeation. I. Experiments with (5F-indole)Trp13 gramicidin A channels.

D D Busath1, C D Thulin, R W Hendershot, L R Phillips, P Maughan, C D Cole, N C Bingham, S Morrison, L C Baird, R J Hendershot, M Cotten, T A Cross.   

Abstract

Gramicidin A (gA), with four Trp residues per monomer, has an increased conductance compared to its Phe replacement analogs. When the dipole moment of the Trp13 side chain is increased by fluorination at indole position 5 (FgA), the conductance is expected to increase further. gA and FgA conductances to Na+, K+, and H+ were measured in planar diphytanoylphosphatidylcholine (DPhPC) or glycerylmonoolein (GMO) bilayers. In DPhPC bilayers, Na+ and K+ conductances increased upon fluorination, whereas in GMO they decreased. The low ratio in the monoglyceride bilayer was not reversed in GMO-ether bilayers, solvent-inflated or -deflated bilayers, or variable fatty acid chain monoglyceride bilayers. In both GMO and DPhPC bilayers, fluorination decreased conductance to H+ but increased conductance in the mixed solution, 1 M KCl at pH 2.0, where K+ dominates conduction. Eadie-Hofstee plot slopes suggest similar destabilization of K+ binding in both lipids. Channel lifetimes were not affected by fluorination in either lipid. These observations indicate that fluorination does not change the rotameric conformation of the side chain. The expected difference in the rate-limiting step for transport through channels in the two bilayers qualitatively explains all of the above trends.

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Year:  1998        PMID: 9826605      PMCID: PMC1299956          DOI: 10.1016/S0006-3495(98)77726-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

1.  High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints.

Authors:  R Ketchem; B Roux; T Cross
Journal:  Structure       Date:  1997-12-15       Impact factor: 5.006

2.  Solid-phase peptide synthesis and solid-state NMR spectroscopy of [Ala3-15N][Val1]gramicidin A.

Authors:  G B Fields; C G Fields; J Petefish; H E Van Wart; T A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  1988-03       Impact factor: 11.205

3.  Synthesis and channel properties of [Tau 16]gramicidin A.

Authors:  R W Roeske; T P Hrinyo-Pavlina; R S Pottorf; T Bridal; X Z Jin; D Busath
Journal:  Biochim Biophys Acta       Date:  1989-07-10

4.  Distinction between dipolar and inductive effects in modulating the conductance of gramicidin channels.

Authors:  R E Koeppe; J L Mazet; O S Andersen
Journal:  Biochemistry       Date:  1990-01-16       Impact factor: 3.162

5.  Unusual structural features in the parallel beta-helix in pectate lyases.

Authors:  M D Yoder; S E Lietzke; F Jurnak
Journal:  Structure       Date:  1993-12-15       Impact factor: 5.006

6.  Single channels of 9, 11, 13, 15-destryptophyl-phenylalanyl-gramicidin A.

Authors:  F Heitz; G Spach; Y Trudelle
Journal:  Biophys J       Date:  1982-10       Impact factor: 4.033

7.  Planar bilayer membranes from pure lipids.

Authors:  R C Waldbillig; G Szabo
Journal:  Biochim Biophys Acta       Date:  1979-11-02

8.  The thickness of monoolein lipid bilayers as determined from reflectance measurements.

Authors:  J P Dilger
Journal:  Biochim Biophys Acta       Date:  1981-07-20

Review 9.  Molecular determinants of channel function.

Authors:  O S Andersen; R E Koeppe
Journal:  Physiol Rev       Date:  1992-10       Impact factor: 37.312

Review 10.  Dipole potential of lipid membranes.

Authors:  H BROCKMAN
Journal:  Chem Phys Lipids       Date:  1994-09-06       Impact factor: 3.329

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  38 in total

1.  Three-dimensional Poisson-Nernst-Planck theory studies: influence of membrane electrostatics on gramicidin A channel conductance.

Authors:  A E Cárdenas; R D Coalson; M G Kurnikova
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  Solvent drag across gramicidin channels demonstrated by microelectrodes.

Authors:  P Pohl; S M Saparov
Journal:  Biophys J       Date:  2000-05       Impact factor: 4.033

3.  The conduction of protons in different stereoisomers of dioxolane-linked gramicidin A channels.

Authors:  E P Quigley; P Quigley; D S Crumrine; S Cukierman
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

4.  Noncontact dipole effects on channel permeation. II. Trp conformations and dipole potentials in gramicidin A.

Authors:  A E Dorigo; D G Anderson; D D Busath
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

5.  Desformylgramicidin: a model channel with an extremely high water permeability.

Authors:  S M Saparov; Y N Antonenko; R E Koeppe; P Pohl
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

6.  A combined molecular dynamics and diffusion model of single proton conduction through gramicidin.

Authors:  M F Schumaker; R Pomès; B Roux
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

7.  Membrane dipole potential modulates proton conductance through gramicidin channel: movement of negative ionic defects inside the channel.

Authors:  Tatyana I Rokitskaya; Elena A Kotova; Yuri N Antonenko
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

8.  Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics.

Authors:  P S Crozier; D Henderson; R L Rowley; D D Busath
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

9.  The role of the dielectric barrier in narrow biological channels: a novel composite approach to modeling single-channel currents.

Authors:  Artem B Mamonov; Rob D Coalson; Abraham Nitzan; Maria G Kurnikova
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

10.  Continuum electrostatics fails to describe ion permeation in the gramicidin channel.

Authors:  Scott Edwards; Ben Corry; Serdar Kuyucak; Shin-Ho Chung
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

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