Literature DB >> 11053127

Desformylgramicidin: a model channel with an extremely high water permeability.

S M Saparov1, Y N Antonenko, R E Koeppe, P Pohl.   

Abstract

The water conductivity of desformylgramicidin exceeds the permeability of gramicidin A by two orders of magnitude. With respect to its single channel hydraulic permeability coefficient of 1.1.10(-12) cm(3) s(-1), desformylgramicidin may serve as a model for extremely permeable aquaporin water channel proteins (AQP4 and AQPZ). This osmotic permeability exceeds the conductivity that is predicted by the theory of single-file transport. It was derived from the concentration distributions of both pore-impermeable and -permeable cations that were simultaneously measured by double barreled microelectrodes in the immediate vicinity of a planar bilayer. From solvent drag experiments, approximately five water molecules were found to be transported by a single-file process along with one ion through the channel. The single channel proton, potassium, and sodium conductivities were determined to be equal to 17 pS (pH 2.5), 7 and 3 pS, respectively. Under any conditions, the desformyl-channel remains at least 10 times longer in its open state than gramicidin A.

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Year:  2000        PMID: 11053127      PMCID: PMC1301135          DOI: 10.1016/S0006-3495(00)76493-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  Solvent drag across gramicidin channels demonstrated by microelectrodes.

Authors:  P Pohl; S M Saparov
Journal:  Biophys J       Date:  2000-05       Impact factor: 4.033

2.  Formation of non-beta 6.3-helical gramicidin channels between sequence-substituted gramicidin analogues.

Authors:  J T Durkin; L L Providence; R E Koeppe; O S Andersen
Journal:  Biophys J       Date:  1992-04       Impact factor: 4.033

3.  Measurements of local pH changes near bilayer lipid membrane by means of a pH microelectrode and a protonophore-dependent membrane potential. Comparison of the methods.

Authors:  Y N Antoneko; A A Bulychev
Journal:  Biochim Biophys Acta       Date:  1991-11-18

4.  Thickness dependence in the action of gramicidin A on lipid bilayers.

Authors:  M C Goodall
Journal:  Arch Biochem Biophys       Date:  1971-11       Impact factor: 4.013

5.  Effect of ultrasound on the pH profiles in the unstirred layers near planar bilayer lipid membranes measured by microelectrodes.

Authors:  P Pohl; Y N Antonenko; E Rosenfeld
Journal:  Biochim Biophys Acta       Date:  1993-10-10

6.  Weak acid transport across bilayer lipid membrane in the presence of buffers. Theoretical and experimental pH profiles in the unstirred layers.

Authors:  Y N Antonenko; G A Denisov; P Pohl
Journal:  Biophys J       Date:  1993-06       Impact factor: 4.033

7.  Ionic selectivity, saturation, and block in gramicidin A channels. II. Saturation behavior of single channel conductances and evidence for the existence of multiple binding sites in the channel.

Authors:  E Neher; J Sandblom; G Eisenman
Journal:  J Membr Biol       Date:  1978-04-26       Impact factor: 1.843

8.  Functional reconstitution and characterization of AqpZ, the E. coli water channel protein.

Authors:  M J Borgnia; D Kozono; G Calamita; P C Maloney; P Agre
Journal:  J Mol Biol       Date:  1999-09-03       Impact factor: 5.469

9.  Interaction of ions and water in gramicidin A channels: streaming potentials across lipid bilayer membranes.

Authors:  P A Rosenberg; A Finkelstein
Journal:  J Gen Physiol       Date:  1978-09       Impact factor: 4.086

10.  Water permeability of gramicidin A-treated lipid bilayer membranes.

Authors:  P A Rosenberg; A Finkelstein
Journal:  J Gen Physiol       Date:  1978-09       Impact factor: 4.086

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  20 in total

1.  Definitive assignment of proton selectivity and attoampere unitary current to the M2 ion channel protein of influenza A virus.

Authors:  T I Lin; C Schroeder
Journal:  J Virol       Date:  2001-04       Impact factor: 5.103

2.  The pH-dependent induction of lipid membrane ionic permeability by N-terminally lysine-substituted analogs of gramicidin A.

Authors:  Tatyana I Rokitskaya; Alexandra I Sorochkina; Sergey I Kovalchuk; Natalya S Egorova; Elena A Kotova; Sergey V Sychev; Yuri N Antonenko
Journal:  Eur Biophys J       Date:  2011-11-01       Impact factor: 1.733

3.  Molecular dynamics simulation of water permeation through the alpha-hemolysin channel.

Authors:  Jirasak Wong-Ekkabut; Mikko Karttunen
Journal:  J Biol Phys       Date:  2015-08-12       Impact factor: 1.365

4.  Invariance of single-file water mobility in gramicidin-like peptidic pores as function of pore length.

Authors:  Guillem Portella; Peter Pohl; Bert L de Groot
Journal:  Biophys J       Date:  2007-03-16       Impact factor: 4.033

5.  Highly selective water channel activity measured by voltage clamp: analysis of planar lipid bilayers reconstituted with purified AqpZ.

Authors:  P Pohl; S M Saparov; M J Borgnia; P Agre
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-07       Impact factor: 11.205

6.  Ion fluxes in giant excised cardiac membrane patches detected and quantified with ion-selective microelectrodes.

Authors:  Tong Mook Kang; Vladislav S Markin; Donald W Hilgemann
Journal:  J Gen Physiol       Date:  2003-04       Impact factor: 4.086

7.  Water permeation through gramicidin A: desformylation and the double helix: a molecular dynamics study.

Authors:  Bert L de Groot; D Peter Tieleman; Peter Pohl; Helmut Grubmüller
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

8.  Electroosmotic enhancement of the binding of a neutral molecule to a transmembrane pore.

Authors:  Li-Qun Gu; Stephen Cheley; Hagan Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-15       Impact factor: 11.205

9.  Liquid-vapor oscillations of water in hydrophobic nanopores.

Authors:  Oliver Beckstein; Mark S P Sansom
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-09       Impact factor: 11.205

10.  Design of peptide-membrane interactions to modulate single-file water transport through modified gramicidin channels.

Authors:  Guillem Portella; Tanja Polupanow; Florian Zocher; Danila A Boytsov; Peter Pohl; Ulf Diederichsen; Bert L de Groot
Journal:  Biophys J       Date:  2012-10-16       Impact factor: 4.033

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