Literature DB >> 1689177

Distinction between dipolar and inductive effects in modulating the conductance of gramicidin channels.

R E Koeppe1, J L Mazet, O S Andersen.   

Abstract

The ion permeability of transmembrane channels formed by the linear gramicidins is altered by amino acid sequence substitutions. We have previously shown that the polarity of the side chain at position one is important in modulating a channel's conductance and ion selectivity [Russel et al. (1986) Biophys. J. 49, 673-686]. Changes in polarity could alter ion permeability by (through-space) ion-dipole interactions or by (through-bond) inductive electron shifts. We have addressed this question by investigating the permeability characteristics of channels formed by gramicidins where the NH2-terminal amino acid is either phenylalanine or one of a series of substituted phenylalanines: p-hydroxy-, p-methoxy-, o-fluoro-, m-fluoro-, or p-fluorophenylalanine. The electron-donating or -withdrawing nature, as quantified by the Hammett constant, ranges from -0.37 to +0.34 for these side chains. Channels formed by these gramicidins show a more than 2.5-fold variation in their Na+ conductance, but the conductance variations do not rank in the order of the Hammett constants of the side chains. Inductive effects cannot therefore be of primary importance in the modulation of the gramicidin single-channel conductance by these side chains. The results support previous suggestions that electrostatic interactions between side chain dipoles and permeating ions can modify the energy profile for ion movement through the gramicidin channel and thus alter the conductance.

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Year:  1990        PMID: 1689177     DOI: 10.1021/bi00454a027

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

1.  Electrostatic influence on ion transport through the alphaHL channel.

Authors:  M Misakian; J J Kasianowicz
Journal:  J Membr Biol       Date:  2003-10-01       Impact factor: 1.843

2.  Simultaneous optical and electrical recording of single gramicidin channels.

Authors:  V Borisenko; T Lougheed; J Hesse; E Füreder-Kitzmüller; N Fertig; J C Behrends; G A Woolley; G J Schütz
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

3.  On the supramolecular organization of gramicidin channels. The elementary conducting unit is a dimer.

Authors:  A S Cifu; R E Koeppe; O S Andersen
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

4.  Noncontact dipole effects on channel permeation. VI. 5F- and 6F-Trp gramicidin channel currents.

Authors:  Chad D Cole; Adam S Frost; Nephi Thompson; Myriam Cotten; Timothy A Cross; David D Busath
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

5.  Voltage-dependent gating of an asymmetric gramicidin channel.

Authors:  S Oiki; R E Koeppe; O S Andersen
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

6.  Conversion of a porin-like peptide channel into a gramicidin-like channel by glycine to D-alanine substitutions.

Authors:  Jyothi Thundimadathil; Roger W Roeske; Lili Guo
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

7.  On the importance of atomic fluctuations, protein flexibility, and solvent in ion permeation.

Authors:  Toby W Allen; O S Andersen; Benoit Roux
Journal:  J Gen Physiol       Date:  2004-12       Impact factor: 4.086

8.  Noncontact dipole effects on channel permeation. I. Experiments with (5F-indole)Trp13 gramicidin A channels.

Authors:  D D Busath; C D Thulin; R W Hendershot; L R Phillips; P Maughan; C D Cole; N C Bingham; S Morrison; L C Baird; R J Hendershot; M Cotten; T A Cross
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

9.  Electrostatic interactions in gramicidin channels. Three-dielectric model.

Authors:  G Martínez; M Sancho
Journal:  Eur Biophys J       Date:  1993       Impact factor: 1.733

10.  Species heterogeneity of Gly-11 gramicidin A incorporated into sodium dodecyl sulfate micelles.

Authors:  J F Hinton; A M Washburn
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

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