Literature DB >> 9707437

Tad1p, a yeast tRNA-specific adenosine deaminase, is related to the mammalian pre-mRNA editing enzymes ADAR1 and ADAR2.

A Gerber1, H Grosjean, T Melcher, W Keller.   

Abstract

We have identified an RNA-specific adenosine deaminase (termed Tad1p/scADAT1) from Saccharomyces cerevisiae that selectively converts adenosine at position 37 of eukaryotic tRNAAla to inosine. The activity of purified recombinant Tad1p depends on the conformation of its tRNA substrate and the enzyme was found to be inactive on all other types of RNA tested. Mutant strains in which the TAD1 gene is disrupted are viable but lack Tad1p enzyme activity and their tRNAAla is not modified at position A37. Transformation of the mutant cells with the TAD1 gene restored enzyme activity. Tad1p has significant sequence similarity with the mammalian editing enzymes which act on specific precursor-mRNAs and on long double-stranded RNA. These findings suggest an evolutionary link between pre-mRNA editing and tRNA modification.

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Year:  1998        PMID: 9707437      PMCID: PMC1170807          DOI: 10.1093/emboj/17.16.4780

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  57 in total

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Authors:  M Vandenbol; P Durand; D Portetelle; F Hilger
Journal:  Yeast       Date:  1995-12       Impact factor: 3.239

2.  Sequence similarity between the 73-kilodalton protein of mammalian CPSF and a subunit of yeast polyadenylation factor I.

Authors:  A Jenny; L Minvielle-Sebastia; P J Preker; W Keller
Journal:  Science       Date:  1996-11-29       Impact factor: 47.728

3.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

4.  Functionally distinct double-stranded RNA-binding domains associated with alternative splice site variants of the interferon-inducible double-stranded RNA-specific adenosine deaminase.

Authors:  Y Liu; C X George; J B Patterson; C E Samuel
Journal:  J Biol Chem       Date:  1997-02-14       Impact factor: 5.157

5.  Mechanism, specificity and general properties of the yeast enzyme catalysing the formation of inosine 34 in the anticodon of transfer RNA.

Authors:  S Auxilien; P F Crain; R W Trewyn; H Grosjean
Journal:  J Mol Biol       Date:  1996-10-04       Impact factor: 5.469

6.  Purification of human double-stranded RNA-specific editase 1 (hRED1) involved in editing of brain glutamate receptor B pre-mRNA.

Authors:  M A O'Connell; A Gerber; W Keller
Journal:  J Biol Chem       Date:  1997-01-03       Impact factor: 5.157

7.  Mutations in STS1 suppress the defect in 3' mRNA processing caused by the rna15-2 mutation in Saccharomyces cerevisiae.

Authors:  N Amrani; M E Dufour; N Bonneaud; F Lacroute
Journal:  Mol Gen Genet       Date:  1996-10-16

Review 8.  Enzymatic conversion of adenosine to inosine and to N1-methylinosine in transfer RNAs: a review.

Authors:  H Grosjean; S Auxilien; F Constantinesco; C Simon; Y Corda; H F Becker; D Foiret; A Morin; Y X Jin; M Fournier; J L Fourrey
Journal:  Biochimie       Date:  1996       Impact factor: 4.079

9.  RED2, a brain-specific member of the RNA-specific adenosine deaminase family.

Authors:  T Melcher; S Maas; A Herb; R Sprengel; M Higuchi; P H Seeburg
Journal:  J Biol Chem       Date:  1996-12-13       Impact factor: 5.157

10.  RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase.

Authors:  A G Polson; B L Bass; J L Casey
Journal:  Nature       Date:  1996-04-04       Impact factor: 49.962

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  56 in total

1.  A primordial tRNA modification required for the evolution of life?

Authors:  G R Björk; K Jacobsson; K Nilsson; M J Johansson; A S Byström; O P Persson
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

2.  Comparative genomics and evolution of proteins involved in RNA metabolism.

Authors:  Vivek Anantharaman; Eugene V Koonin; L Aravind
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

Review 3.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

4.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

5.  A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop.

Authors:  Sonia D'Silva; Steffen J Haider; Eric M Phizicky
Journal:  RNA       Date:  2011-04-25       Impact factor: 4.942

6.  Modulation of RNA editing by functional nucleolar sequestration of ADAR2.

Authors:  Christopher L Sansam; K Sam Wells; Ronald B Emeson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-11       Impact factor: 11.205

Review 7.  tRNA biology charges to the front.

Authors:  Eric M Phizicky; Anita K Hopper
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

8.  Crystallization and preliminary X-ray crystallographic analysis of the tRNA-specific adenosine deaminase from Streptococcus pyogenes.

Authors:  Min-Je Ku; Won-Ho Lee; Ki-hyun Nam; Kyeong-hee Rhee; Ki-Seog Lee; Eunice EunKyung Kim; Myung-Hee Yu; Kwang Yeon Hwang
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-03-12

Review 9.  Parallel Evolution and Lineage-Specific Expansion of RNA Editing in Ctenophores.

Authors:  Andrea B Kohn; Rachel S Sanford; Masa-aki Yoshida; Leonid L Moroz
Journal:  Integr Comp Biol       Date:  2015-06-18       Impact factor: 3.326

10.  Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNAArg(ACG) and is essential for efficient chloroplast translation.

Authors:  Etienne Delannoy; Monique Le Ret; Emmanuelle Faivre-Nitschke; Gonzalo M Estavillo; Marc Bergdoll; Nicolas L Taylor; Barry J Pogson; Ian Small; Patrice Imbault; José M Gualberto
Journal:  Plant Cell       Date:  2009-07-14       Impact factor: 11.277

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