Literature DB >> 14612560

Modulation of RNA editing by functional nucleolar sequestration of ADAR2.

Christopher L Sansam1, K Sam Wells, Ronald B Emeson.   

Abstract

The adenosine deaminases that act on RNA (ADARs) catalyze the site-specific conversion of adenosine to inosine (A to I) in primary mRNA transcripts, thereby affecting the splicing pattern or coding potential of mature mRNAs. Although the subnuclear localization of A-to-I editing has not been precisely defined, ADARs have been shown to act before splicing, suggesting that they function near nucleoplasmic sites of transcription. Here we demonstrate that ADAR2, a member of the vertebrate ADAR family, is concentrated in the nucleolus, a subnuclear domain disparate from the sites of mRNA transcription. Selective inhibition of ribosomal RNA synthesis or the introduction of mutations in the double-stranded RNA-binding domains within ADAR2 results in translocation of the protein to the nucleoplasm, suggesting that nucleolar association of ADAR2 depends on its ability to bind to ribosomal RNA. Fluorescence recovery after photobleaching reveals that ADAR2 can shuttle rapidly between subnuclear compartments. Enhanced translocation of endogenous ADAR2 from the nucleolus to the nucleoplasm results in increased editing of endogenous ADAR2 substrates. These observations indicate that the nucleolar localization of ADAR2 represents an important mechanism by which RNA editing can be modulated by the sequestration of enzymatic activity from potential RNA substrates in the nucleoplasm.

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Year:  2003        PMID: 14612560      PMCID: PMC283538          DOI: 10.1073/pnas.2336131100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

Review 1.  To be or not to be in the nucleolus.

Authors:  M Carmo-Fonseca; L Mendes-Soares; I Campos
Journal:  Nat Cell Biol       Date:  2000-06       Impact factor: 28.824

Review 2.  Protein dynamics: implications for nuclear architecture and gene expression.

Authors:  T Misteli
Journal:  Science       Date:  2001-02-02       Impact factor: 47.728

3.  Dynamics and three-dimensional localization of ribosomal RNA within the nucleolus.

Authors:  M Thiry; T Cheutin; M F O'Donohue; H Kaplan; D Ploton
Journal:  RNA       Date:  2000-12       Impact factor: 4.942

4.  Dynamic association of RNA-editing enzymes with the nucleolus.

Authors:  Joana M P Desterro; Liam P Keegan; Miguel Lafarga; Maria Teresa Berciano; Mary O'Connell; Maria Carmo-Fonseca
Journal:  J Cell Sci       Date:  2003-05-01       Impact factor: 5.285

Review 5.  A-to-I RNA editing: recent news and residual mysteries.

Authors:  Stefan Maas; Alexander Rich; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2002-11-20       Impact factor: 5.157

Review 6.  On the importance of being co-transcriptional.

Authors:  Karla M Neugebauer
Journal:  J Cell Sci       Date:  2002-10-15       Impact factor: 5.285

7.  Nucleolar Arf sequesters Mdm2 and activates p53.

Authors:  J D Weber; L J Taylor; M F Roussel; C J Sherr; D Bar-Sagi
Journal:  Nat Cell Biol       Date:  1999-05       Impact factor: 28.824

Review 8.  RNA editing by adenosine deaminases generates RNA and protein diversity.

Authors:  Myriam Schaub; Walter Keller
Journal:  Biochimie       Date:  2002-08       Impact factor: 4.079

9.  A nucleolar targeting sequence in the Werner syndrome protein resides within residues 949-1092.

Authors:  Cayetano von Kobbe; Vilhelm A Bohr
Journal:  J Cell Sci       Date:  2002-10-15       Impact factor: 5.285

10.  Biochemical analysis and scanning force microscopy reveal productive and nonproductive ADAR2 binding to RNA substrates.

Authors:  Yvonne Klaue; Annika M Källman; Michael Bonin; Wolfgang Nellen; Marie Ohman
Journal:  RNA       Date:  2003-07       Impact factor: 4.942

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  87 in total

Review 1.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

Review 2.  Substitutional A-to-I RNA editing.

Authors:  Bjorn-Erik Wulff; Kazuko Nishikura
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Jul-Aug       Impact factor: 9.957

Review 3.  Adenosine deaminases acting on RNA, RNA editing, and interferon action.

Authors:  Cyril X George; Zhenji Gan; Yong Liu; Charles E Samuel
Journal:  J Interferon Cytokine Res       Date:  2010-12-23       Impact factor: 2.607

4.  Insights into nuclear organization in plants as revealed by the dynamic distribution of Arabidopsis SR splicing factors.

Authors:  Vinciane Tillemans; Isabelle Leponce; Glwadys Rausin; Laurence Dispa; Patrick Motte
Journal:  Plant Cell       Date:  2006-11-17       Impact factor: 11.277

Review 5.  A-to-I RNA editing and human disease.

Authors:  Stefan Maas; Yukio Kawahara; Kristen M Tamburro; Kazuko Nishikura
Journal:  RNA Biol       Date:  2006-01-12       Impact factor: 4.652

6.  ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells.

Authors:  Weidong Yang; Qingde Wang; Kelly L Howell; Joshua T Lee; Dan-Sung C Cho; John M Murray; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2004-11-19       Impact factor: 5.157

7.  Chromosomal storage of the RNA-editing enzyme ADAR1 in Xenopus oocytes.

Authors:  Nina B Sallacz; Michael F Jantsch
Journal:  Mol Biol Cell       Date:  2005-04-20       Impact factor: 4.138

8.  NC-mediated nucleolar localization of retroviral gag proteins.

Authors:  Timothy L Lochmann; Darrin V Bann; Eileen P Ryan; Andrea R Beyer; Annie Mao; Alan Cochrane; Leslie J Parent
Journal:  Virus Res       Date:  2012-10-02       Impact factor: 3.303

9.  Evolving insights into RNA modifications and their functional diversity in the brain.

Authors:  Sarah Nainar; Paul R Marshall; Christina R Tyler; Robert C Spitale; Timothy W Bredy
Journal:  Nat Neurosci       Date:  2016-09-27       Impact factor: 24.884

Review 10.  A role for A-to-I RNA editing in temperature adaptation.

Authors:  Sandra C Garrett; Joshua J C Rosenthal
Journal:  Physiology (Bethesda)       Date:  2012-12
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