Literature DB >> 8918472

RNA editing changes the identity of a mitochondrial tRNA in marsupials.

G V Börner1, M Mörl, A Janke, S Pääbo.   

Abstract

In the mitochondrial genome of marsupials, the tRNA gene located at the position where in other mammals an aspartyl-tRNA is encoded carries the glycine anticodon GCC. Post-transcriptionally, an RNA editing mechanism affects the second position of the anticodon such that the aspartate anticodon GUC is created in approximately 50% of the mature tRNA pool. We show that the unedited version of this tRNA'Asp' (GCC) can be specifically aminoacylated with glycine in vitro, while the edited version becomes aminoacylated with aspartic acid. Furthermore, we show that both forms are aminoacylated to a substantial extent in vivo. By replacing an amino group with a keto group, RNA editing thus changes the identity of this tRNA allowing a single gene to encode two tRNAs.

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Year:  1996        PMID: 8918472      PMCID: PMC452375     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  44 in total

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Authors:  I L Andrulis; S M Arfin
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  Evolutionary fixation of RNA editing.

Authors:  G V Börner; S Pääbo
Journal:  Nature       Date:  1996-09-19       Impact factor: 49.962

3.  Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA.

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Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

4.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

5.  The pIC plasmid and phage vectors with versatile cloning sites for recombinant selection by insertional inactivation.

Authors:  J L Marsh; M Erfle; E J Wykes
Journal:  Gene       Date:  1984-12       Impact factor: 3.688

6.  The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations. III. Techniques and potential applications.

Authors:  R A Lansman; R O Shade; J F Shapira; J C Avise
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

7.  Different pattern of codon recognition by mammalian mitochondrial tRNAs.

Authors:  B G Barrell; S Anderson; A T Bankier; M H de Bruijn; E Chen; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

8.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

9.  Apolipoprotein B-48 is the product of a messenger RNA with an organ-specific in-frame stop codon.

Authors:  S H Chen; G Habib; C Y Yang; Z W Gu; B R Lee; S A Weng; S R Silberman; S J Cai; J P Deslypere; M Rosseneu
Journal:  Science       Date:  1987-10-16       Impact factor: 47.728

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  32 in total

1.  Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata).

Authors:  S i Yokobori; T Ueda; G Feldmaier-Fuchs; S Pääbo; R Ueshima; A Kondow; K Nishikawa; K Watanabe
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

2.  Evidence for import of a lysyl-tRNA into marsupial mitochondria.

Authors:  M Dörner; M Altmann; S Pääbo; M Mörl
Journal:  Mol Biol Cell       Date:  2001-09       Impact factor: 4.138

Review 3.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

4.  Antarctic fish mitochondrial genomes lack ND6 gene.

Authors:  Chiara Papetti; Pietro Liò; Lukas Rüber; Tomaso Patarnello; Rafael Zardoya
Journal:  J Mol Evol       Date:  2007-10-23       Impact factor: 2.395

5.  The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria.

Authors:  A Janke; X Xu; U Arnason
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

Review 6.  Genome structure and gene content in protist mitochondrial DNAs.

Authors:  M W Gray; B F Lang; R Cedergren; G B Golding; C Lemieux; D Sankoff; M Turmel; N Brossard; E Delage; T G Littlejohn; I Plante; P Rioux; D Saint-Louis; Y Zhu; G Burger
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

7.  Identification of enzymes for adenosine-to-inosine editing and discovery of cytidine-to-uridine editing in nucleus-encoded transfer RNAs of Arabidopsis.

Authors:  Wenbin Zhou; Daniel Karcher; Ralph Bock
Journal:  Plant Physiol       Date:  2014-10-14       Impact factor: 8.340

8.  From canonical to modified nucleotides: balancing translation and metabolism.

Authors:  Federica Accornero; Robert L Ross; Juan D Alfonzo
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-09-16       Impact factor: 8.250

9.  Origin, evolution, and mechanism of 5' tRNA editing in chytridiomycete fungi.

Authors:  Marie-Josée Laforest; Charles E Bullerwell; Lise Forget; B Franz Lang
Journal:  RNA       Date:  2004-07-09       Impact factor: 4.942

10.  Comparative mitogenomic analyses of three scallops (Bivalvia: Pectinidae) reveal high level variation of genomic organization and a diversity of transfer RNA gene sets.

Authors:  Xiangyun Wu; Xiaodong Xu; Ziniu Yu; Xiaoyu Kong
Journal:  BMC Res Notes       Date:  2009-05-05
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