Literature DB >> 8744324

Measurement of intercolumnar forces between parallel guanosine four-stranded helices.

P Mariani1, L Saturni.   

Abstract

The deoxyguanosine-5'-monophosphate in aqueous solution self-associates into stable structures, which include hexagonal and cholesteric columnar phases. The structural unit is a four-stranded helix, composed of a stacked array of Hoogsteen-bonded guanosine quartets. We have measured by osmotic stress method the force per unit length versus interaxial distance between helices in the hexagonal phase under various ionic conditions. Two contributions have been recognized: the first one is purely electrostatic, is effective at large distances, and shows a strong dependence on the salt concentration of the solution. The second contribution is short range, dominates at interaxial separations smaller than about 30-32 A, and rises steeply as the columns approach each other, preventing the coalescence of the helices. This repulsion has an exponential nature and shows a magnitude and a decay length insensitive to the ionic strength of the medium. Because these features are distinctive of the hydration force detected between phospholipid bilayers or between several linear macromolecules (DNA, polysaccharides, collagen), we conclude that the dominant force experienced by deoxyguanosine helices approaching contact is hydration repulsion. The observed decay length of about 0.7 A has been rationalized to emerge from the coupling between the 3-A decay length of water solvent and the helically ordered structure of the hydrophilic groups on the opposing surfaces. The present results agree with recent measurements, also showing the dependence of the hydration force decay on the structure of interacting surfaces and confirm the correlations between force and structure.

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Year:  1996        PMID: 8744324      PMCID: PMC1225266          DOI: 10.1016/S0006-3495(96)79856-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  16 in total

1.  Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces.

Authors:  D C Rau; V A Parsegian
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

2.  Unusual lyotropic polymorphism of deoxyguanosine-5'-monophosphate: X-ray diffraction analysis of the correlation between self-assembling and phase behavior.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1994-07

3.  Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops.

Authors:  W I Sundquist; A Klug
Journal:  Nature       Date:  1989-12-14       Impact factor: 49.962

4.  Osmotic stress for the direct measurement of intermolecular forces.

Authors:  V A Parsegian; R P Rand; N L Fuller; D C Rau
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

Review 5.  Long-range physical forces in the biological milieu.

Authors:  V A Parsegian
Journal:  Annu Rev Biophys Bioeng       Date:  1973

6.  Direct measurement of forces between self-assembled proteins: temperature-dependent exponential forces between collagen triple helices.

Authors:  S Leikin; D C Rau; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-04       Impact factor: 11.205

7.  Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

Authors:  D C Rau; B Lee; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

8.  Direct measurement of forces between linear polysaccharides xanthan and schizophyllan.

Authors:  D C Rau; V A Parsegian
Journal:  Science       Date:  1990-09-14       Impact factor: 47.728

9.  Novel DNA superstructures formed by telomere-like oligomers.

Authors:  D Sen; W Gilbert
Journal:  Biochemistry       Date:  1992-01-14       Impact factor: 3.162

10.  Variation in hydration forces between neutral phospholipid bilayers: evidence for hydration attraction.

Authors:  R P Rand; N Fuller; V A Parsegian; D C Rau
Journal:  Biochemistry       Date:  1988-10-04       Impact factor: 3.162

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  11 in total

1.  Dynamic light scattering and 31P NMR study of the self-assembly of deoxyguanosine 5'-monophosphate: the effect of added salt.

Authors:  L Spindler; I Drevensek-Olenik; M Copic; J Cerar; J Skerjanc; P Mariani
Journal:  Eur Phys J E Soft Matter       Date:  2004-01       Impact factor: 1.890

2.  Symmetry laws for interaction between helical macromolecules.

Authors:  A A Kornyshev; S Leikin
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

3.  Chiral symmetry breaking by spatial confinement in tactoidal droplets of lyotropic chromonic liquid crystals.

Authors:  Luana Tortora; Oleg D Lavrentovich
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-14       Impact factor: 11.205

4.  How soft are biological helices? A measure of axial and lateral force constants in folate quadruplexes by high-pressure X-ray diffraction.

Authors:  Francesco Federiconi; Michele Mattioni; Enrico J Baldassarri; Maria Grazia Ortore; Paolo Mariani
Journal:  Eur Biophys J       Date:  2011-06-29       Impact factor: 1.733

5.  Raman spectral evidence for hydration forces between collagen triple helices.

Authors:  S Leikin; V A Parsegian; W Yang; G E Walrafen
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-14       Impact factor: 11.205

6.  Helix-specific interactions induce condensation of guanosine four-stranded helices in concentrated salt solutions.

Authors:  P Mariani; F Ciuchi; L Saturni
Journal:  Biophys J       Date:  1998-01       Impact factor: 4.033

7.  Re-entrant cholesteric phase in DNA liquid-crystalline dispersion particles.

Authors:  Yuri M Yevdokimov; Sergey G Skuridin; Sergey V Semenov; Ljubov A Dadinova; Viktor I Salyanov; Efim I Kats
Journal:  J Biol Phys       Date:  2016-12-27       Impact factor: 1.365

8.  Chiral symmetry breaking and surface faceting in chromonic liquid crystal droplets with giant elastic anisotropy.

Authors:  Joonwoo Jeong; Zoey S Davidson; Peter J Collings; Tom C Lubensky; A G Yodh
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

9.  Solvent hydrogen-bond network in protein self-assembly: solvation of collagen triple helices in nonaqueous solvents.

Authors:  N Kuznetsova; D C Rau; V A Parsegian; S Leikin
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

10.  Guanosine quadruplexes in solution: a small-angle x-ray scattering analysis of temperature effects on self-assembling of deoxyguanosine monophosphate.

Authors:  P Mariani; F Spinozzi; F Federiconi; M G Ortore; H Amenitsch; L Spindler; I Drevensek-Olenik
Journal:  J Nucleic Acids       Date:  2010-06-21
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