Literature DB >> 1540693

Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces.

D C Rau1, V A Parsegian.   

Abstract

Rather than acting by modifying van der Waals or electrostatic double layer interactions or by directly bridging neighboring molecules, polyvalent ligands bound to DNA double helices appear to act by reconfiguring the water between macromolecular surfaces to create attractive long range hydration forces. We have reached this conclusion by directly measuring the repulsive forces between parallel B-form DNA double helices pushed together from the separations at which they have self organized into hexagonal arrays of parallel rods. For all of the wide variety of "condensing agents" from divalent Mn to polymeric protamines, the resulting intermolecular force varies exponentially with a decay rate of 1.4-1.5 A, exactly one-half that seen previously for hydration repulsion. Such behavior qualitatively contradicts the predictions of all electrostatic double layer and van der Waals force potentials previously suggested. It fits remarkably well with the idea, developed and tested here, that multivalent counterion adsorption reorganizes the water at discrete sites complementary to unadsorbed sites on the apposing surface. The measured strength and range of these attractive forces together with their apparent specificity suggest the presence of a previously unexpected force in molecular organization.

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Year:  1992        PMID: 1540693      PMCID: PMC1260238          DOI: 10.1016/S0006-3495(92)81831-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  29 in total

1.  Measured entropy and enthalpy of hydration as a function of distance between DNA double helices.

Authors: 
Journal:  Phys Rev A       Date:  1991-10-15       Impact factor: 3.140

Review 2.  Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity.

Authors:  M T Record; C F Anderson; T M Lohman
Journal:  Q Rev Biophys       Date:  1978-05       Impact factor: 5.318

3.  Counterion-induced condesation of deoxyribonucleic acid. a light-scattering study.

Authors:  R W Wilson; V A Bloomfield
Journal:  Biochemistry       Date:  1979-05-29       Impact factor: 3.162

4.  Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice.

Authors:  J D McGhee; P H von Hippel
Journal:  J Mol Biol       Date:  1974-06-25       Impact factor: 5.469

5.  Monomolecular condensation of lambda-DNA induced by cobalt hexamine.

Authors:  J Widom; R L Baldwin
Journal:  Biopolymers       Date:  1983-06       Impact factor: 2.505

6.  DNA condensation with polyamines. II. Electron microscopic studies.

Authors:  D K Chattoraj; L C Gosule; A Schellman
Journal:  J Mol Biol       Date:  1978-05-25       Impact factor: 5.469

7.  Cation-induced toroidal condensation of DNA studies with Co3+(NH3)6.

Authors:  J Widom; R L Baldwin
Journal:  J Mol Biol       Date:  1980-12-25       Impact factor: 5.469

8.  Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

Authors:  D C Rau; B Lee; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

9.  X-ray diffraction studies of nucleoprotamine structure.

Authors:  P Suau; J A Subirana
Journal:  J Mol Biol       Date:  1977-12-25       Impact factor: 5.469

10.  Variation in hydration forces between neutral phospholipid bilayers: evidence for hydration attraction.

Authors:  R P Rand; N Fuller; V A Parsegian; D C Rau
Journal:  Biochemistry       Date:  1988-10-04       Impact factor: 3.162

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  149 in total

1.  Brownian dynamics simulation of DNA condensation.

Authors:  P E Sottas; E Larquet; A Stasiak; J Dubochet
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  DNA condensation in two dimensions.

Authors:  I Koltover; K Wagner; C R Safinya
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

3.  Intermolecular interactions and water structure in a condensed phase B-DNA crystal.

Authors:  G R Clark; C J Squire; L J Baker; R F Martin; J White
Journal:  Nucleic Acids Res       Date:  2000-03-01       Impact factor: 16.971

4.  DNA packaging and ejection forces in bacteriophage.

Authors:  J Kindt; S Tzlil; A Ben-Shaul; W M Gelbart
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

5.  Cryoelectron microscopy of lambda phage DNA condensates in vitreous ice: the fine structure of DNA toroids.

Authors:  N V Hud; K H Downing
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-04       Impact factor: 11.205

6.  Mechanics of DNA packaging in viruses.

Authors:  Prashant K Purohit; Jané Kondev; Rob Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-10       Impact factor: 11.205

7.  Forces and pressures in DNA packaging and release from viral capsids.

Authors:  Shelly Tzlil; James T Kindt; William M Gelbart; Avinoam Ben-Shaul
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

8.  Stretching DNA with optical tweezers.

Authors:  M D Wang; H Yin; R Landick; J Gelles; S M Block
Journal:  Biophys J       Date:  1997-03       Impact factor: 4.033

9.  Sequence-dependent DNA condensation as a driving force of DNA phase separation.

Authors:  Hyunju Kang; Jejoong Yoo; Byeong-Kwon Sohn; Seung-Won Lee; Hong Soo Lee; Wenjie Ma; Jung-Min Kee; Aleksei Aksimentiev; Hajin Kim
Journal:  Nucleic Acids Res       Date:  2018-10-12       Impact factor: 16.971

10.  Interhelical spacing in liquid crystalline spermine and spermidine-DNA precipitates.

Authors:  E Raspaud; D Durand; F Livolant
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

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