Literature DB >> 21713534

How soft are biological helices? A measure of axial and lateral force constants in folate quadruplexes by high-pressure X-ray diffraction.

Francesco Federiconi1, Michele Mattioni, Enrico J Baldassarri, Maria Grazia Ortore, Paolo Mariani.   

Abstract

Alkaline folates self-associate in aqueous solutions to form columnar lyotropic phases. Such phases are made by quadruplexes, which are supramolecular helicoidal structures formed by a stacked array of folate tetramers. High-pressure synchrotron X-ray diffraction is used to analyze alkaline folate quadruplex stability and energetics. Diffraction data show that both inter-helical lateral and tetramer stacking distances decrease as a function of pressure. Lateral and axial quadruplex compressibilities and force constants have been derived and strong correlation between the strength of tetramer stacking and pressure effects demonstrated. In particular, quadruplex rigidity increases by changing Na+ to K+ and by adding excess KCl, as a consequence of increased stacking interactions and quadruplex elongation.

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Year:  2011        PMID: 21713534     DOI: 10.1007/s00249-011-0717-0

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  18 in total

1.  G-Quadruplex stabilization by telomestatin induces TRF2 protein dissociation from telomeres and anaphase bridge formation accompanied by loss of the 3' telomeric overhang in cancer cells.

Authors:  H Tahara; K Shin-Ya; H Seimiya; H Yamada; T Tsuruo; T Ide
Journal:  Oncogene       Date:  2006-03-23       Impact factor: 9.867

2.  Met-myoglobin association in dilute solution during pressure-induced denaturation: an analysis at pH 4.5 by high-pressure small-angle X-ray scattering.

Authors:  F Spinozzi; P Mariani; L Saturni; F Carsughi; S Bernstorff; S Cinelli; G Onori
Journal:  J Phys Chem B       Date:  2007-03-21       Impact factor: 2.991

3.  Small angle X-ray scattering analysis of deoxyguanosine 5'-monophosphate self-assembing in solution: nucleation and growth of G-quadruplexes.

Authors:  Paolo Mariani; Francesco Spinozzi; Francesco Federiconi; Heinz Amenitsch; Lea Spindler; Irena Drevensek-Olenik
Journal:  J Phys Chem B       Date:  2009-06-04       Impact factor: 2.991

4.  Combining structure and dynamics: non-denaturing high-pressure effect on lysozyme in solution.

Authors:  Maria Grazia Ortore; Francesco Spinozzi; Paolo Mariani; Alessandro Paciaroni; Leandro R S Barbosa; Heinz Amenitsch; Milos Steinhart; Jacques Ollivier; Daniela Russo
Journal:  J R Soc Interface       Date:  2009-07-01       Impact factor: 4.118

Review 5.  The use of hydrostatic pressure as a tool to study viruses and other macromolecular assemblages.

Authors:  J L Silva; D Foguel; A T Da Poian; P E Prevelige
Journal:  Curr Opin Struct Biol       Date:  1996-04       Impact factor: 6.809

6.  Pressure effects on lipidic direct phases: the dodecyl trimethyl ammonium chloride-water system.

Authors:  Lydia Paccamiccio; Michela Pisani; Francesco Spinozzi; Claudio Ferrero; Stephanie Finet; Paolo Mariani
Journal:  J Phys Chem B       Date:  2006-06-29       Impact factor: 2.991

7.  Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

Authors:  D C Rau; B Lee; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

8.  The chirality of the cholesteric phases of DNA and G-wires: its connection to their molecular structures.

Authors:  G Proni; G Gottarelli; P Mariani; G P Spada
Journal:  Chemistry       Date:  2000-09-01       Impact factor: 5.236

Review 9.  Stability and kinetics of G-quadruplex structures.

Authors:  Andrew N Lane; J Brad Chaires; Robert D Gray; John O Trent
Journal:  Nucleic Acids Res       Date:  2008-08-21       Impact factor: 16.971

10.  Compressing inverse lyotropic systems: Structural behavior and energetics of dioleoyl phosphatidyl ethanolamine.

Authors:  Michela Pisani; Theyencheri Narayanan; Giordano M Di Gregorio; Claudio Ferrero; Stephanie Finet; Paolo Mariani
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-08-29
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  1 in total

1.  Decreased activity of folate transporters in lipid rafts resulted in reduced hepatic folate uptake in chronic alcoholism in rats.

Authors:  Nissar Ahmad Wani; Ritambhara Nada; Krishan Lal Khanduja; Jyotdeep Kaur
Journal:  Genes Nutr       Date:  2012-09-07       Impact factor: 5.523

  1 in total

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