Literature DB >> 8702816

Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.

K L Lou1, N Saint, A Prilipov, G Rummel, S A Benson, J P Rosenbusch, T Schirmer.   

Abstract

OmpF porin is a nonspecific pore protein from the outer membrane of Escherichia coli. Previously, a set of mutants was selected that allow the passage of long maltodextrins that do not translocate through the wild-type pore. Here, we describe the crystal structures of four point mutants and one deletion mutant from this set; their functional characterization is reported in the accompanying paper (Saint, N., Lou, K.-L., Widmer, C., Luckey, M., Schirmer, T., Rosenbusch, J. P. (1996) J. Biol. Chem. 271, 20676-20680). All mutations have a local effect on the structure of the pore constriction and result in a larger pore cross-section. Substitution of each of the three closely packed arginine residues at the pore constriction (Arg-42, Arg-82, and Arg-132) by shorter uncharged residues causes rearrangement of the adjacent basic residues. This demonstrates mutual stabilization of these residues in the wild-type porin. Deletion of six residues from the internal loop (Delta109-114) results in disorder of seven adjacent residues but does not alter the structure of the beta-barrel framework. Thus, the large hollow beta-barrel motif can be regarded as an autonomous structure.

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Year:  1996        PMID: 8702816

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  28 in total

1.  Imaging the electrostatic potential of transmembrane channels: atomic probe microscopy of OmpF porin.

Authors:  Ansgar Philippsen; Wonpil Im; Andreas Engel; Tilman Schirmer; Benoit Roux; Daniel J Müller
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

2.  Alteration of pore properties of Escherichia coli OmpF induced by mutation of key residues in anti-loop 3 region.

Authors:  Jérôme Bredin; Nathalie Saint; Monique Malléa; Emmanuelle Dé; Gérard Molle; Jean-Marie Pagès; Valérie Simonet
Journal:  Biochem J       Date:  2002-05-01       Impact factor: 3.857

3.  Residue ionization and ion transport through OmpF channels.

Authors:  Ekaterina M Nestorovich; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

Review 4.  Molecular basis of bacterial outer membrane permeability revisited.

Authors:  Hiroshi Nikaido
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

5.  Substitutions in the eyelet region disrupt cefepime diffusion through the Escherichia coli OmpF channel.

Authors:  V Simonet; M Malléa; J M Pagès
Journal:  Antimicrob Agents Chemother       Date:  2000-02       Impact factor: 5.191

6.  Chemical modification of the bacterial porin OmpF: gain of selectivity by volume reduction.

Authors:  Maarten Vrouenraets; Jenny Wierenga; Wim Meijberg; Henk Miedema
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

7.  Partitioning of differently sized poly(ethylene glycol)s into OmpF porin.

Authors:  Tatiana K Rostovtseva; Ekaterina M Nestorovich; Sergey M Bezrukov
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

8.  Porin mutants with new channel properties.

Authors:  B Schmid; L Maveyraud; M Krömer; G E Schulz
Journal:  Protein Sci       Date:  1998-07       Impact factor: 6.725

9.  Voltage gating of Escherichia coli porin channels: role of the constriction loop.

Authors:  P S Phale; T Schirmer; A Prilipov; K L Lou; A Hardmeyer; J P Rosenbusch
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

10.  The ionization state of D37 in E. coli porin OmpF and the nature of conductance fluctuations in D37 mutants.

Authors:  Maarten Vrouenraets; Henk Miedema
Journal:  Eur Biophys J       Date:  2010-06-04       Impact factor: 1.733

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