Literature DB >> 10639355

Substitutions in the eyelet region disrupt cefepime diffusion through the Escherichia coli OmpF channel.

V Simonet1, M Malléa, J M Pagès.   

Abstract

The Escherichia coli OmpF porin is a nonspecific channel involved in the membrane translocation of small hydrophilic molecules and especially in the passage of beta-lactam antibiotics. In order to understand the dynamic of charged-compound uptake through bacterial porins, specific charges located in the E. coli OmpF channel were mutated. Substitutions G119D and G119E, inserting a protruding acidic side chain into the pore, decreased cephalosporin and colicin susceptibilities. Cefepime diffusion was drastically altered by these mutations. Conversely, substitutions R132A and R132D, changing a residue located in the positively charged cluster, increased the rate of cephalosporin uptake without modifying colicin sensitivity. Modelling approaches suggest that G119E generates a transverse hydrogen bond dividing the pore, while the two R132 substitutions stretch the channel size. These charge alterations located in the constriction area have differential effects on cephalosporin diffusion and substantially modify the profile of antibiotic susceptibility.

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Year:  2000        PMID: 10639355      PMCID: PMC89676          DOI: 10.1128/AAC.44.2.311-315.2000

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  34 in total

1.  Computational observation of an ion permeation through a channel protein.

Authors:  A Suenaga; Y Komeiji; M Uebayasi; T Meguro; M Saito; I Yamato
Journal:  Biosci Rep       Date:  1998-02       Impact factor: 3.840

2.  Coupling site-directed mutagenesis with high-level expression: large scale production of mutant porins from E. coli.

Authors:  A Prilipov; P S Phale; P Van Gelder; J P Rosenbusch; R Koebnik
Journal:  FEMS Microbiol Lett       Date:  1998-06-01       Impact factor: 2.742

3.  A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer.

Authors:  D P Tieleman; H J Berendsen
Journal:  Biophys J       Date:  1998-06       Impact factor: 4.033

4.  Distinct regions of the colicin A translocation domain are involved in the interaction with TolA and TolB proteins upon import into Escherichia coli.

Authors:  E Bouveret; A Rigal; C Lazdunski; H Bénédetti
Journal:  Mol Microbiol       Date:  1998-01       Impact factor: 3.501

5.  Structural and functional characterization of OmpF porin mutants selected for larger pore size. II. Functional characterization.

Authors:  N Saint; K L Lou; C Widmer; M Luckey; T Schirmer; J P Rosenbusch
Journal:  J Biol Chem       Date:  1996-08-23       Impact factor: 5.157

6.  Voltage sensing in the PhoE and OmpF outer membrane porins of Escherichia coli: role of charged residues.

Authors:  P Van Gelder; N Saint; P Phale; E F Eppens; A Prilipov; R van Boxtel; J P Rosenbusch; J Tommassen
Journal:  J Mol Biol       Date:  1997-06-20       Impact factor: 5.469

7.  Voltage gating of Escherichia coli porin channels: role of the constriction loop.

Authors:  P S Phale; T Schirmer; A Prilipov; K L Lou; A Hardmeyer; J P Rosenbusch
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

Review 8.  The bacterial outer membrane as a drug barrier.

Authors:  R E Hancock
Journal:  Trends Microbiol       Date:  1997-01       Impact factor: 17.079

9.  Computer simulations of the OmpF porin from the outer membrane of Escherichia coli.

Authors:  M Watanabe; J Rosenbusch; T Schirmer; M Karplus
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

10.  Mutations that alter the pore function of the OmpF porin of Escherichia coli K12.

Authors:  S A Benson; J L Occi; B A Sampson
Journal:  J Mol Biol       Date:  1988-10-20       Impact factor: 5.469

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  26 in total

1.  Alteration of pore properties of Escherichia coli OmpF induced by mutation of key residues in anti-loop 3 region.

Authors:  Jérôme Bredin; Nathalie Saint; Monique Malléa; Emmanuelle Dé; Gérard Molle; Jean-Marie Pagès; Valérie Simonet
Journal:  Biochem J       Date:  2002-05-01       Impact factor: 3.857

2.  Oxacillinase-mediated resistance to cefepime and susceptibility to ceftazidime in Pseudomonas aeruginosa.

Authors:  D Aubert; L Poirel; J Chevalier; S Leotard; J M Pages; P Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2001-06       Impact factor: 5.191

3.  Residue ionization and ion transport through OmpF channels.

Authors:  Ekaterina M Nestorovich; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

4.  Designed to penetrate: time-resolved interaction of single antibiotic molecules with bacterial pores.

Authors:  Ekaterina M Nestorovich; Christophe Danelon; Mathias Winterhalter; Sergey M Bezrukov
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-15       Impact factor: 11.205

5.  Permeation rates of penicillins indicate that Escherichia coli porins function principally as nonspecific channels.

Authors:  Seiji Kojima; Hiroshi Nikaido
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-24       Impact factor: 11.205

6.  Bridging timescales and length scales: from macroscopic flux to the molecular mechanism of antibiotic diffusion through porins.

Authors:  Eric Hajjar; Kozhinjampara R Mahendran; Amit Kumar; Andrey Bessonov; Mircea Petrescu; Helge Weingart; Paolo Ruggerone; Mathias Winterhalter; Matteo Ceccarelli
Journal:  Biophys J       Date:  2010-02-17       Impact factor: 4.033

7.  The fitness costs and trade-off shapes associated with the exclusion of nine antibiotics by OmpF porin channels.

Authors:  Katherine Phan; Thomas Ferenci
Journal:  ISME J       Date:  2017-01-10       Impact factor: 10.302

8.  Microscopic Mechanism of Antibiotics Translocation through a Porin.

Authors:  Matteo Ceccarelli; Christophe Danelon; Alessandro Laio; Michele Parrinello
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

9.  Functional reconstitution, gene isolation and topology modelling of porins from Burkholderia pseudomallei and Burkholderia thailandensis.

Authors:  Jaruwan Siritapetawee; Heino Prinz; Worada Samosornsuk; Richard H Ashley; Wipa Suginta
Journal:  Biochem J       Date:  2004-02-01       Impact factor: 3.857

10.  Factors associated with antimicrobial resistance among clinical isolates of Klebsiella pneumoniae: 1-year survey in a French university hospital.

Authors:  C De Champs; C Rich; P Chandezon; C Chanal; D Sirot; C Forestier
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2004-05-18       Impact factor: 3.267

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