Literature DB >> 8635469

Reading two bases twice: mammalian antizyme frameshifting in yeast.

S Matsufuji1, T Matsufuji, N M Wills, R F Gesteland, J F Atkins.   

Abstract

Programmed translational frameshifting is essential for the expression of mammalian ornithine decarboxylase antizyme, a protein involved in the regulation of intracellular polyamines. A cassette containing antizyme frameshift signals is found to direct high-level (16%) frameshifting in yeast, Saccharomyces cerevisiae. In contrast to +1 frameshifting in the mammalian system, in yeast the same frame is reached by -2 frameshifting. Two bases are read twice. The -2 frameshifting is likely to be mediated by slippage of mRNA and re-pairing with the tRNA in the P-site. The downstream pseudoknot stimulates frameshifting by 30-fold compared with 2.5-fold in reticulocyte lysates. When the length of the spacer between the shift site and the pseudoknot is extended by three nucleotides, +1 and -2 frameshifting become equal.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8635469      PMCID: PMC450040     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  65 in total

1.  The appearance of an ornithine decarboxylase inhibitory protein upon the addition of putrescine to cell cultures.

Authors:  W F Fong; J S Heller; E S Canellakis
Journal:  Biochim Biophys Acta       Date:  1976-04-23

2.  Prokaryotic ribosomes recode the HIV-1 gag-pol-1 frameshift sequence by an E/P site post-translocation simultaneous slippage mechanism.

Authors:  J A Horsfield; D N Wilson; S A Mannering; F M Adamski; W P Tate
Journal:  Nucleic Acids Res       Date:  1995-05-11       Impact factor: 16.971

3.  Molecular cloning and sequencing of a human cDNA encoding ornithine decarboxylase antizyme.

Authors:  D S Tewari; Y Qian; R D Thornton; J Pieringer; R Taub; E Mochan; M Tewari
Journal:  Biochim Biophys Acta       Date:  1994-12-14

Review 4.  Rapid and regulated degradation of ornithine decarboxylase.

Authors:  S Hayashi; Y Murakami
Journal:  Biochem J       Date:  1995-02-15       Impact factor: 3.857

5.  rRNA-mRNA base pairing stimulates a programmed -1 ribosomal frameshift.

Authors:  B Larsen; N M Wills; R F Gesteland; J F Atkins
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

6.  SPE1 and SPE2: two essential genes in the biosynthesis of polyamines that modulate +1 ribosomal frameshifting in Saccharomyces cerevisiae.

Authors:  D Balasundaram; J D Dinman; C W Tabor; H Tabor
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

7.  The cDNA sequence of Trichomonas vaginalis virus-T1 double-stranded RNA.

Authors:  J H Tai; C F Ip
Journal:  Virology       Date:  1995-01-10       Impact factor: 3.616

8.  Versatile vectors to study recoding: conservation of rules between yeast and mammalian cells.

Authors:  G Stahl; L Bidou; J P Rousset; M Cassan
Journal:  Nucleic Acids Res       Date:  1995-05-11       Impact factor: 16.971

9.  Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.

Authors:  X Chen; M Chamorro; S I Lee; L X Shen; J V Hines; I Tinoco; H E Varmus
Journal:  EMBO J       Date:  1995-02-15       Impact factor: 11.598

10.  Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme.

Authors:  S Matsufuji; T Matsufuji; Y Miyazaki; Y Murakami; J F Atkins; R F Gesteland; S Hayashi
Journal:  Cell       Date:  1995-01-13       Impact factor: 41.582

View more
  34 in total

1.  Maintenance of the correct open reading frame by the ribosome.

Authors:  Thomas M Hansen; Pavel V Baranov; Ivaylo P Ivanov; Raymond F Gesteland; John F Atkins
Journal:  EMBO Rep       Date:  2003-05       Impact factor: 8.807

2.  Antizyme frameshifting as a functional probe of eukaryotic translational termination.

Authors:  Zemfira N Karamysheva; Andrey L Karamyshev; Koichi Ito; Takashi Yokogawa; Kazuya Nishikawa; Yoshikazu Nakamura; Senya Matsufuji
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

3.  Evolutionary specialization of recoding: frameshifting in the expression of S. cerevisiae antizyme mRNA is via an atypical antizyme shift site but is still +1.

Authors:  Ivaylo P Ivanov; Raymond F Gesteland; John F Atkins
Journal:  RNA       Date:  2006-01-23       Impact factor: 4.942

4.  Comparative study of the effects of heptameric slippery site composition on -1 frameshifting among different eukaryotic systems.

Authors:  Ewan P Plant; Jonathan D Dinman
Journal:  RNA       Date:  2006-02-22       Impact factor: 4.942

5.  The bifunctional DCOH protein binds to HNF1 independently of its 4-alpha-carbinolamine dehydratase activity.

Authors:  D J Sourdive; C Transy; S Garbay; M Yaniv
Journal:  Nucleic Acids Res       Date:  1997-04-15       Impact factor: 16.971

6.  A dual-luciferase reporter system for studying recoding signals.

Authors:  G Grentzmann; J A Ingram; P J Kelly; R F Gesteland; J F Atkins
Journal:  RNA       Date:  1998-04       Impact factor: 4.942

7.  The interplay of mRNA stimulatory signals required for AUU-mediated initiation and programmed -1 ribosomal frameshifting in decoding of transposable element IS911.

Authors:  Marie-Françoise Prère; Isabelle Canal; Norma M Wills; John F Atkins; Olivier Fayet
Journal:  J Bacteriol       Date:  2011-04-08       Impact factor: 3.490

Review 8.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

Review 9.  Structure and functions of hepatitis C virus proteins: 15 years after.

Authors:  L Krekulová; V Rehák; L W Riley
Journal:  Folia Microbiol (Praha)       Date:  2006       Impact factor: 2.099

10.  Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein.

Authors:  Ying Fang; Emmely E Treffers; Yanhua Li; Ali Tas; Zhi Sun; Yvonne van der Meer; Arnoud H de Ru; Peter A van Veelen; John F Atkins; Eric J Snijder; Andrew E Firth
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-04       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.