Literature DB >> 7787014

Approximating the effects of diffusion on reversible reactions at the cell surface: ligand-receptor kinetics.

B Goldstein1, M Dembo.   

Abstract

We consider the problem of determining the time dependence of the bound ligand concentration for the reversible binding of a diffusing monovalent ligand to receptors uniformly distributed over the surface of a spherical cell. We start by formulating a boundary value problem that captures the essential physics of this situation. We then introduce a systematic approximation scheme based on the method of weighted residuals. By this means we convert the initial boundary value problem into a simpler problem that requires solving only a small number of ordinary differential equations. We show how, at the lowest order of approximation, the method can be used to obtain modified chemical rate equations where, in place of fundamental rate constants, effective rate coefficients appear. These rate coefficients are functions of the ligand diffusion coefficient, the cell radius, the receptor density and other variables. We compare exact and approximate solutions and discuss under what conditions the approximate equations can be used. We also apply the method of weighted residuals to obtain approximate descriptions of the binding kinetics when (1) there are two different cell surface receptor populations that bind the ligand and (2) the cell secretes a ligand that can bind back to receptors on the cell (autocrine binding).

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Year:  1995        PMID: 7787014      PMCID: PMC1282020          DOI: 10.1016/S0006-3495(95)80298-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  10 in total

1.  Autocrine ligand binding to cell receptors. Mathematical analysis of competition by solution "decoys".

Authors:  K E Forsten; D A Lauffenburger
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

2.  Time dependent rate of diffusion-influenced ligand binding to receptors on cell surfaces.

Authors:  R Zwanzig; A Szabo
Journal:  Biophys J       Date:  1991-09       Impact factor: 4.033

3.  The adsorption of coliphage lambda to its host: effect of variations in the surface density of receptor and in phage-receptor affinity.

Authors:  M Schwartz
Journal:  J Mol Biol       Date:  1976-05-25       Impact factor: 5.469

4.  Probability of autocrine ligand capture by cell-surface receptors: implications for ligand secretion measurements.

Authors:  K E Forsten; D A Lauffenburger
Journal:  J Comput Biol       Date:  1994       Impact factor: 1.479

5.  Physics of chemoreception.

Authors:  H C Berg; E M Purcell
Journal:  Biophys J       Date:  1977-11       Impact factor: 4.033

6.  Competition between solution and cell surface receptors for ligand. Dissociation of hapten bound to surface antibody in the presence of solution antibody.

Authors:  B Goldstein; R G Posner; D C Torney; J Erickson; D Holowka; B Baird
Journal:  Biophys J       Date:  1989-11       Impact factor: 4.033

7.  The effect of receptor density on the forward rate constant for binding of ligands to cell surface receptors.

Authors:  J Erickson; B Goldstein; D Holowka; B Baird
Journal:  Biophys J       Date:  1987-10       Impact factor: 4.033

8.  Role of diffusion regulation in receptor--ligand interactions.

Authors:  C DeLisi
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

9.  Role of diffusion in ligand binding to macromolecules and cell-bound receptors.

Authors:  D Shoup; A Szabo
Journal:  Biophys J       Date:  1982-10       Impact factor: 4.033

10.  The role of low-affinity interleukin-2 receptors in autocrine ligand binding: alternative mechanisms for enhanced binding effect.

Authors:  K E Forsten; D A Lauffenburger
Journal:  Mol Immunol       Date:  1994-07       Impact factor: 4.407

  10 in total
  27 in total

1.  Effective rate models for receptors distributed in a layer above a surface: application to cells and Biacore.

Authors:  Carla Wofsy; Byron Goldstein
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

2.  Spatial range of autocrine signaling: modeling and computational analysis.

Authors:  S Y Shvartsman; H S Wiley; W M Deen; D A Lauffenburger
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

3.  Refining the measurement of rate constants in the BIAcore.

Authors:  David A Edwards
Journal:  J Math Biol       Date:  2004-04-23       Impact factor: 2.259

Review 4.  Long-lasting target binding and rebinding as mechanisms to prolong in vivo drug action.

Authors:  Georges Vauquelin; Steven J Charlton
Journal:  Br J Pharmacol       Date:  2010-10       Impact factor: 8.739

5.  Ligand accumulation in autocrine cell cultures.

Authors:  Michael I Monine; Alexander M Berezhkovskii; Elizabeth J Joslin; H Steven Wiley; Douglas A Lauffenburger; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

6.  The kinetics of analyte capture on nanoscale sensors.

Authors:  J E Solomon; M R Paul
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

7.  Microelectrophoresis of a bilayer-coated silica bead in an optical trap: application to enzymology.

Authors:  R Galneder; V Kahl; A Arbuzova; M Rebecchi; J O Rädler; S McLaughlin
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

8.  Simplified models for heterobivalent ligand binding: when are they applicable and which are the factors that affect their target residence time.

Authors:  Georges Vauquelin
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2013-06-28       Impact factor: 3.000

9.  Effect of ligand diffusion on occupancy fluctuations of cell-surface receptors.

Authors:  Alexander M Berezhkovskii; Attila Szabo
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

10.  Theory for ligand rebinding at cell membrane surfaces.

Authors:  B C Lagerholm; N L Thompson
Journal:  Biophys J       Date:  1998-03       Impact factor: 4.033

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