Literature DB >> 9512020

Theory for ligand rebinding at cell membrane surfaces.

B C Lagerholm1, N L Thompson.   

Abstract

Conditions for which a ligand reversibly bound to a cell surface dissociates and then rebinds to the surface have been theoretically examined. The coupled differential equations that describe reaction at the interface between sites on a plane and three-dimensional solution have been described previously (Thompson, N. L., T. P. Burghardt, and D. Axelrod. 1981. Biophys. J. 33:435-454). Here, we use this theoretical formalism to provide an analytical solution for the spatial and temporal dependence of the probabilities of finding a molecule on the surface or in the solution, given initial placement on the surface at the origin. This general analytical solution is used to derive a simple expression for the probability that a molecule rebinds to the surface at a given position and time after release at the origin and time zero. The probability expressions provide fundamental equations that form a basis for subsequent modeling of ligand-receptor interactions in specific geometries.

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Year:  1998        PMID: 9512020      PMCID: PMC1299470          DOI: 10.1016/S0006-3495(98)77836-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

1.  Binding kinetics of an anti-dinitrophenyl monoclonal Fab on supported phospholipid monolayers measured by total internal reflection with fluorescence photobleaching recovery.

Authors:  M L Pisarchick; D Gesty; N L Thompson
Journal:  Biophys J       Date:  1992-07       Impact factor: 4.033

2.  Reaction rate enhancement by surface diffusion of adsorbates.

Authors:  D Wang; S Y Gou; D Axelrod
Journal:  Biophys Chem       Date:  1992-06       Impact factor: 2.352

3.  Surface binding kinetics of prothrombin fragment 1 on planar membranes measured by total internal reflection fluorescence microscopy.

Authors:  K H Pearce; R G Hiskey; N L Thompson
Journal:  Biochemistry       Date:  1992-07-07       Impact factor: 3.162

4.  Direct measurement of single-molecule diffusion and photodecomposition in free solution.

Authors:  X H Xu; E S Yeung
Journal:  Science       Date:  1997-02-21       Impact factor: 47.728

5.  Physics of chemoreception.

Authors:  H C Berg; E M Purcell
Journal:  Biophys J       Date:  1977-11       Impact factor: 4.033

6.  A fractal analysis of external diffusion limited first-order kinetics for the binding of antigen by immobilized antibody.

Authors:  A Sadana; A Madagula
Journal:  Biosens Bioelectron       Date:  1994       Impact factor: 10.618

7.  Synaptic transmission in a diffusion model for neural activity.

Authors:  V Lánská; P Lánský; C E Smith
Journal:  J Theor Biol       Date:  1994-02-21       Impact factor: 2.691

8.  Reduction-of-dimensionality kinetics at reaction-limited cell surface receptors.

Authors:  D Axelrod; M D Wang
Journal:  Biophys J       Date:  1994-03       Impact factor: 4.033

9.  Theory for measuring bivalent surface binding kinetics using total internal reflection with fluorescence photobleaching recovery.

Authors:  H V Hsieh; N L Thompson
Journal:  Biophys J       Date:  1994-03       Impact factor: 4.033

10.  Measuring surface dynamics of biomolecules by total internal reflection fluorescence with photobleaching recovery or correlation spectroscopy.

Authors:  N L Thompson; T P Burghardt; D Axelrod
Journal:  Biophys J       Date:  1981-03       Impact factor: 4.033

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  31 in total

1.  Total internal reflection with fluorescence correlation spectroscopy: combined surface reaction and solution diffusion.

Authors:  T E Starr; N L Thompson
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Binding and diffusion of CheR molecules within a cluster of membrane receptors.

Authors:  Matthew D Levin; Thomas S Shimizu; Dennis Bray
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

3.  Spatial range of autocrine signaling: modeling and computational analysis.

Authors:  S Y Shvartsman; H S Wiley; W M Deen; D A Lauffenburger
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

4.  Mobility of taxol in microtubule bundles.

Authors:  Jennifer L Ross; D Kuchnir Fygenson
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

5.  Ligand-receptor kinetics measured by total internal reflection with fluorescence correlation spectroscopy.

Authors:  Alena M Lieto; Randall C Cush; Nancy L Thompson
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

6.  Total internal reflection with fluorescence correlation spectroscopy: nonfluorescent competitors.

Authors:  Alena M Lieto; Nancy L Thompson
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

7.  Effects of receptor clustering on ligand dissociation kinetics: theory and simulations.

Authors:  Manoj Gopalakrishnan; Kimberly Forsten-Williams; Matthew A Nugent; Uwe C Täuber
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

8.  Lateral ligand-receptor interactions on membranes probed by simultaneous fluorescence-interference detection.

Authors:  Martynas Gavutis; Suman Lata; Peter Lamken; Pia Müller; Jacob Piehler
Journal:  Biophys J       Date:  2005-03-18       Impact factor: 4.033

9.  The kinetics of analyte capture on nanoscale sensors.

Authors:  J E Solomon; M R Paul
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

10.  Self-assembled combinatorial encoding nanoarrays for multiplexed biosensing.

Authors:  Chenxiang Lin; Yan Liu; Hao Yan
Journal:  Nano Lett       Date:  2007-02       Impact factor: 11.189

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