Literature DB >> 6011

Estimation of the dissociation constants of enzyme-substrate complexes from steady-state measurements. Interpretation of pH-independence of Km.

A Cornish-Bowden.   

Abstract

If the Michaelis constant of an enzyme-catalysed reaction is independent of pH under conditions where the catalytic constant varies with pH, it is equal to the thermodynamic dissociation constant of the enzyme-substrate complex. This is true for realistic mechanisms in which binding and catalytic steps, are clearly distinguished, as well as for the simpler mechanisms that have been considered previously. It is also true for a mechanism in which a bell-shaped pH profile for the catalytic constant results from a change of rate-limiting step with pH. The relaxation time for ionization of a typical group in unbuffered solutions at 25 degrees C is of the order of 0.1 ms at the longest, and is much shorter in buffered solutions. Thus ionizations in almost all enzyme mechanisms can properly be treated as equilibria, provided that ionization is not accompanied by a slow, compulsory change in conformation.

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Year:  1976        PMID: 6011      PMCID: PMC1172593          DOI: 10.1042/bj1530455

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  14 in total

Review 1.  ELEMENTARY STEPS IN ENZYME REACTIONS (AS STUDIED BY RELAXATION SPECTROMETRY).

Authors:  M EIGEN; G G HAMMES
Journal:  Adv Enzymol Relat Subj Biochem       Date:  1963

2.  ULTRASONIC ATTENUATION MEASUREMENTS IN POLY-L-GLUAMIC ACID SOLUTIONS.

Authors:  J J BURKE; G G HAMMES; T B LEWIS
Journal:  J Chem Phys       Date:  1965-05-15       Impact factor: 3.488

3.  A Note on the Kinetics of Enzyme Action.

Authors:  G E Briggs; J B Haldane
Journal:  Biochem J       Date:  1925       Impact factor: 3.857

4.  Curves of ligand binding. The use of hyperbolic functions for expressing titration curves.

Authors:  H B Dixon
Journal:  Biochem J       Date:  1974-03       Impact factor: 3.857

5.  Proton nuclear magnetic resonance studies of ribonuclease A in H 2 O.

Authors:  D J Patel; C K Woodward; F A Bovey
Journal:  Proc Natl Acad Sci U S A       Date:  1972-03       Impact factor: 11.205

6.  Shapes of curves of pH-dependence of reactions.

Authors:  H B Dixon
Journal:  Biochem J       Date:  1973-01       Impact factor: 3.857

7.  The effect of pH on the rates of hydrolysis of three acylated dipeptides by pepsin.

Authors:  J L Denburg; R Nelson; M S Silver
Journal:  J Am Chem Soc       Date:  1968-01-17       Impact factor: 15.419

8.  Equilibrium and rate constants for the interconversion of two conformations of -chymotrypsin. The existence of a catalytically inactive conformation at neutral p H.

Authors:  A R Fersht; Y Requena
Journal:  J Mol Biol       Date:  1971-09-14       Impact factor: 5.469

9.  The effects of hydrogen ion concentration on the simplest steady-state enzyme systems.

Authors:  P Ottolenghi
Journal:  Biochem J       Date:  1971-07       Impact factor: 3.857

10.  Effect of pH on the catalytic activity of Streptomyces griseus protease 3.

Authors:  C A Bauer; G Pettersson
Journal:  Eur J Biochem       Date:  1974-06-15
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  15 in total

1.  PH-dependence of the steady-state rate of a two-step enzymic reaction.

Authors:  K Brocklehurst; H B Dixon
Journal:  Biochem J       Date:  1976-04-01       Impact factor: 3.857

2.  Rapid determination of enzyme kinetics from fluorescence: overcoming the inner filter effect.

Authors:  Mark O Palmier; Steven R Van Doren
Journal:  Anal Biochem       Date:  2007-07-18       Impact factor: 3.365

3.  Algebraic methods for deriving steady-state rate equations. Practical difficulties with mechanisms that contain repeated rate constants.

Authors:  A Cornish-Bowden
Journal:  Biochem J       Date:  1976-10-01       Impact factor: 3.857

4.  Evolution of enzyme catalytic power. Characteristics of optimal catalysis evaluated for the simplest plausible kinetic model.

Authors:  K Brocklehurst
Journal:  Biochem J       Date:  1977-04-01       Impact factor: 3.857

5.  pH-activity curves for enzyme-catalysed reactions in which the hydron is a product or reactant.

Authors:  H B Dixon; K Brocklehurst; K F Tipton
Journal:  Biochem J       Date:  1987-12-01       Impact factor: 3.857

6.  The pH-dependence of second-order rate constants of enzyme modification may provide free-reactant pKa values.

Authors:  K Brocklehurst; H B Dixon
Journal:  Biochem J       Date:  1977-12-01       Impact factor: 3.857

7.  Structural and kinetic studies on beta-lactamase K1 from Klebsiella aerogenes.

Authors:  E L Emanuel; J Gagnon; S G Waley
Journal:  Biochem J       Date:  1986-03-01       Impact factor: 3.857

8.  The effect of pH on the exchangeability with deuterium of protons coupled to molybdenum(V) in the active and the desulpho forms of xanthine oxidase.

Authors:  J P Malthouse; R C Bray
Journal:  Biochem J       Date:  1983-10-01       Impact factor: 3.857

9.  The catalytic activity of pig pepsin C towards small synthetic substrates.

Authors:  C A Auffret; A P Ryle
Journal:  Biochem J       Date:  1979-04-01       Impact factor: 3.857

10.  Chemical structure and biodegradability of halogenated aromatic compounds. Substituent effects on 1,2-dioxygenation of catechol.

Authors:  E Dorn; H J Knackmuss
Journal:  Biochem J       Date:  1978-07-15       Impact factor: 3.857

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