Literature DB >> 6278410

Apple II software for M13 shotgun DNA sequencing.

R Larson, J Messing.   

Abstract

A set of programs is presented for the reconstruction of a DNA sequence from data generated by the M13 shotgun sequencing technique. Once the sequence has been established and stored other programs are used for its analysis. The programs have been written for the Apple II microcomputer. A minimum investment is required for the hardware and the software is easily interchangeable between the growing number of interested researchers. Copies are available in ready to use form.

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Year:  1982        PMID： 6278410      PMCID： PMC326112          DOI： 10.1093/nar/10.1.39

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  3 in total

1.  A new computer method for the storage and manipulation of DNA gel reading data.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1980-08-25       Impact factor: 16.971

2.  Sequence data handling by computer.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1977-11       Impact factor: 16.971

3.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971
  3 in total
  49 in total

1.  Nucleotide sequence of bean golden mosaic virus and a model for gene regulation in geminiviruses.

Authors:  A J Howarth; J Caton; M Bossert; R M Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

2.  Highly structured sequence homology between an insertion element and the gene in which it resides.

Authors:  P R Rhodes; L O Vodkin
Journal:  Proc Natl Acad Sci U S A       Date:  1985-01       Impact factor: 11.205

3.  Synergy of two reference genomes for the grass family.

Authors:  Joachim Messing
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

4.  Localization and nucleotide sequence of the gene for the membrane polypeptide D2 from pea chloroplast DNA.

Authors:  O F Rasmussen; G Bookjans; B M Stummann; K W Henningsen
Journal:  Plant Mol Biol       Date:  1984-07       Impact factor: 4.076

Review 5.  Cloning single-stranded DNA.

Authors:  J Messing
Journal:  Mol Biotechnol       Date:  1996-02       Impact factor: 2.695

6.  GC balance in the internal transcribed spacers ITS 1 and ITS 2 of nuclear ribosomal RNA genes.

Authors:  R A Torres; M Ganal; V Hemleben
Journal:  J Mol Evol       Date:  1990-02       Impact factor: 2.395

7.  Nucleotide sequences of three tRNA genes encoded in Tetrahymena mitochondrial DNA.

Authors:  Y Suyama
Journal:  Nucleic Acids Res       Date:  1985-05-10       Impact factor: 16.971

8.  Unique sequences are interspersed among tandemly repeated elements in the murine gamma 1 switch segment.

Authors:  M Mowatt; C Dery; W Dunnick
Journal:  Nucleic Acids Res       Date:  1985-01-11       Impact factor: 16.971

9.  'Solo' large terminal repeats (LTR) of an endogenous retrovirus-like gene family (VL30) in the mouse genome.

Authors:  G Rotman; A Itin; E Keshet
Journal:  Nucleic Acids Res       Date:  1984-03-12       Impact factor: 16.971

10.  Molecular cloning of biologically active Rauscher spleen focus-forming virus and the sequences of its env gene and long terminal repeat.

Authors:  R K Bestwick; B A Boswell; D Kabat
Journal:  J Virol       Date:  1984-09       Impact factor: 5.103
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