Literature DB >> 3612808

Recombination of carbon monoxide to ferrous horseradish peroxidase types A and C.

W Doster, S F Bowne, H Frauenfelder, L Reinisch, E Shyamsunder.   

Abstract

The recombination of carbon monoxide to isoenzymes A2 and C of horseradish peroxidase (HRP) was studied as a function of temperature (2 to 320 K) and pH (5 to 8.3) with flash photolysis and infrared difference absorption. At low temperatures three geminate recombination processes are observed. One of these internal processes, denoted by I*, is exponential in time with a rate coefficient that deviates strongly from an Arrhenius behavior below 100 K, implying phonon-assisted tunneling. The two other processes, denoted by I, are non-exponential in time and related to different carbonyl isomers, as shown by the infrared difference spectra. The existence of three internal processes indicates that HRP differs considerably from myoglobin where only one internal process, I, is seen. Moreover, the internal processes in HRP are faster than process I in myoglobin. At 300 K, only one recombination process from the solvent is observed and it is very slow (lambda s approximately 1 s-1 at 1 atm CO (1 atm = 101,325 Pa)), much slower than the corresponding association process in myoglobin. Since process I is fast, but binding from the solvent is slow, the barrier at the heme cannot be responsible for the small association rate. The infrared absorption difference spectra of the amide I/II bands indicate that photolysis and recombination trigger a two-step structural change. The slow recombination rate at 300 K can thus be explained by the large Gibbs energy of the conformational transition that is necessary to let CO move into the heme pocket. The partition coefficient for the CO in the heme pocket and the solvent is extremely small, while bond formation with the heme iron occurs in less than 100 nanoseconds.

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Year:  1987        PMID: 3612808     DOI: 10.1016/0022-2836(87)90377-9

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  13 in total

1.  Influence of static and dynamic disorder on the visible and infrared absorption spectra of carbonmonoxy horseradish peroxidase.

Authors:  A D Kaposi; J M Vanderkooi; W W Wright; J Fidy; S S Stavrov
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Temperature-derivative spectroscopy: a tool for protein dynamics.

Authors:  J Berendzen; D Braunstein
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

3.  Redox- and anion-linked protonation sites in horseradish peroxidase: analysis of distal haem pocket mutants.

Authors:  B Meunier; J N Rodriguez-Lopez; A T Smith; R N Thorneley; P R Rich
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

4.  Dynamic properties of monomeric insect erythrocruorin III from Chironomus thummi-thummi: relationships between structural flexibility and functional complexity.

Authors:  E E Di Iorio; I Tavernelli; W Yu
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

5.  Ligand binding to heme proteins. VI. Interconversion of taxonomic substates in carbonmonoxymyoglobin.

Authors:  J B Johnson; D C Lamb; H Frauenfelder; J D Müller; B McMahon; G U Nienhaus; R D Young
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

6.  Spectral diffusion and the energy landscape of a protein.

Authors:  K Fritsch; J Friedrich; F Parak; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-24       Impact factor: 11.205

7.  Structural relaxation and nonexponential kinetics of CO-binding to horse myoglobin. Multiple flash photolysis experiments.

Authors:  F Post; W Doster; G Karvounis; M Settles
Journal:  Biophys J       Date:  1993-06       Impact factor: 4.033

8.  Heme-protein fission under nondenaturing conditions.

Authors:  M L Smith; J Paul; P I Ohlsson; K Hjortsberg; K G Paul
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

9.  Investigations of vibrational coherence in the low-frequency region of ferric heme proteins.

Authors:  Flaviu Gruia; Minoru Kubo; Xiong Ye; Paul M Champion
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

10.  Structure-dynamics-function relationships in Asian elephant (Elephas maximus) myoglobin. An optical spectroscopy and flash photolysis study on functionally important motions.

Authors:  A Cupane; M Leone; E Vitrano; L Cordone; U R Hiltpold; K H Winterhalter; W Yu; E E Di Iorio
Journal:  Biophys J       Date:  1993-12       Impact factor: 4.033

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