Literature DB >> 8986777

Spectral diffusion and the energy landscape of a protein.

K Fritsch1, J Friedrich, F Parak, J L Skinner.   

Abstract

We present a novel type of spectral diffusion experiment in the millikelvin range to characterize the energy landscape of a protein as compared with that of a glass. We measure the time evolution of spectral holes for more than 300 hr after well-defined initial nonequilibrium conditions. We show that the model of noninteracting two-level systems can describe spectral diffusion in the glass, but fails for the protein. Our results further demonstrate that randomness in the energy landscape of a protein shows features of organization. There are "deep minimum" states separated by barriers, the heights of which we are able to estimate. The energy landscape of a glass is featureless by comparison.

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Year:  1996        PMID: 8986777      PMCID: PMC26370          DOI: 10.1073/pnas.93.26.15141

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Microscopic theory for dilute quadrupole glasses.

Authors: 
Journal:  Phys Rev Lett       Date:  1990-12-10       Impact factor: 9.161

2.  Time scales and optical dephasing measurements: Investigation of dynamics in complex systems.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1989-05-15

3.  Inhomogeneous broadening in spectral bands of carbonmonoxymyoglobin. The connection between spectral and functional heterogeneity.

Authors:  P Ormos; A Ansari; D Braunstein; B R Cowen; H Frauenfelder; M K Hong; I E Iben; T B Sauke; P J Steinbach; R D Young
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

4.  Applications of spectral hole burning spectroscopies to antenna and reaction center complexes.

Authors:  N R Reddy; P A Lyle; G J Small
Journal:  Photosynth Res       Date:  1992-03       Impact factor: 3.573

5.  Low temperature X-ray investigation of structural distributions in myoglobin.

Authors:  F Parak; H Hartmann; K D Aumann; H Reuscher; G Rennekamp; H Bartunik; W Steigemann
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

6.  Temperature-dependent X-ray diffraction as a probe of protein structural dynamics.

Authors:  H Frauenfelder; G A Petsko; D Tsernoglou
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

7.  Protein states and proteinquakes.

Authors:  A Ansari; J Berendzen; S F Bowne; H Frauenfelder; I E Iben; T B Sauke; E Shyamsunder; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

8.  Complexity in proteins.

Authors:  H Frauenfelder
Journal:  Nat Struct Biol       Date:  1995-10

9.  Conformational relaxation of a low-temperature protein as probed by photochemical hole burning. Horseradish peroxidase.

Authors:  J Zollfrank; J Friedrich; J M Vanderkooi; J Fidy
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

10.  Rebinding and relaxation in the myoglobin pocket.

Authors:  A Ansari; J Berendzen; D Braunstein; B R Cowen; H Frauenfelder; M K Hong; I E Iben; J B Johnson; P Ormos; T B Sauke
Journal:  Biophys Chem       Date:  1987-05-09       Impact factor: 2.352

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  4 in total

1.  Direct observation of tiers in the energy landscape of a chromoprotein: a single-molecule study.

Authors:  Clemens Hofmann; Thijs J Aartsma; Hartmut Michel; Jürgen Köhler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-11       Impact factor: 11.205

2.  Aging dynamics in globular proteins: summary and analysis of experimental results and simulation by a modified trap model.

Authors:  Levente Herenyi; Krisztian Szigeti; Judit Fidy; Tamas Temesvari; Jorg Schlichter; Josef Friedrich
Journal:  Eur Biophys J       Date:  2003-09-03       Impact factor: 1.733

3.  Trehalose effect on low temperature protein dynamics: fluctuation and relaxation phenomena.

Authors:  J Schlichter; J Friedrich; L Herenyi; J Fidy
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

4.  Spectral diffusion and electron-phonon coupling of the B800 BChl a molecules in LH2 complexes from three different species of purple bacteria.

Authors:  J Baier; M Gabrielsen; S Oellerich; H Michel; M van Heel; R J Cogdell; J Köhler
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

  4 in total

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