Literature DB >> 11721008

Influence of static and dynamic disorder on the visible and infrared absorption spectra of carbonmonoxy horseradish peroxidase.

A D Kaposi1, J M Vanderkooi, W W Wright, J Fidy, S S Stavrov.   

Abstract

Spectroscopy of horseradish peroxidase with and without the substrate analog, benzohydroxamic acid, was monitored in a glycerol/water solvent as a function of temperature. It was determined from the water infrared (IR) absorption that the solvent has a glass transition at 170-180 K. In the absence of substrate, both the heme optical Q(0,0) absorption band and the IR absorption band of CO bound to heme broaden markedly upon heating from 10-300 K. The Q(0,0) band broadens smoothly in the whole temperature interval, whereas the IR bandwidth is constant in the glassy matrix and increases from 7 to 16 cm(-1) upon heating above the glass transition. Binding of substrate strongly diminishes temperature broadening of both the bands. The results are consistent with the view that the substrate strongly reduces the amplitude of motions of amino acids forming the heme pocket. The main contribution to the Q(0,0) bandwidth arises from the heme vibrations that are not affected by the phase transition. The CO band thermal broadening stems from the anharmonic coupling with motions of the heme environment, which, in the glassy state, are frozen in. Unusually strong temperature broadening of the CO band is interpreted to be caused by thermal population of a very flexible excited conformational substrate. Analysis of literature data on the thermal broadening of the A(0) band of Mb(CO) (Ansari et al., 1987. Biophys. Chem. 26:337-355) shows that such a state presents itself also in myoglobin.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11721008      PMCID: PMC1301802          DOI: 10.1016/S0006-3495(01)75978-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  48 in total

Review 1.  Oxygen sensing heme proteins: monoxygenases, myoglobin and hemoglobin.

Authors:  I C Gunsalus; S G Sligar; T Nordlund; H Frauenfelder
Journal:  Adv Exp Med Biol       Date:  1977       Impact factor: 2.622

2.  Temperature-dependent X-ray diffraction as a probe of protein structural dynamics.

Authors:  H Frauenfelder; G A Petsko; D Tsernoglou
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

3.  Heme-modification studies on horseradish peroxidase.

Authors:  M Tamura; T Asakura; T Yonetani
Journal:  Biochim Biophys Acta       Date:  1972-05-12

4.  Conformational substates in a protein: structure and dynamics of metmyoglobin at 80 K.

Authors:  H Hartmann; F Parak; W Steigemann; G A Petsko; D R Ponzi; H Frauenfelder
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

5.  Protein dynamics. Mössbauer spectroscopy on deoxymyoglobin crystals.

Authors:  F Parak; E W Knapp; D Kucheida
Journal:  J Mol Biol       Date:  1982-10-15       Impact factor: 5.469

6.  Structural dynamics of human deoxyhemoglobin and hemochrome investigated by nuclear gamma resonance absorption (Mössbauer) spectroscopy.

Authors:  K H Mayo; D Kucheida; F Parak; J C Chien
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

7.  A consistent picture of protein dynamics.

Authors:  F Parak; E W Knapp
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

8.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

9.  Raman and infrared spectra of cytochrome c peroxidase-carbon monoxide adducts in alternative conformational states.

Authors:  G Smulevich; R Evangelista-Kirkup; A English; T G Spiro
Journal:  Biochemistry       Date:  1986-07-29       Impact factor: 3.162

10.  Alternative carbon monoxide binding modes for horseradish peroxidase studied by resonance Raman spectroscopy.

Authors:  R Evangelista-Kirkup; G Smulevich; T G Spiro
Journal:  Biochemistry       Date:  1986-07-29       Impact factor: 3.162

View more
  7 in total

1.  Temperature dependence of the iron-histidine resonance Raman band of deoxyheme proteins: anharmonic coupling versus distribution over taxonomic conformational substates.

Authors:  Michael Korostishevsky; Zeev Zaslavsky; Solomon S Stavrov
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

2.  Low-temperature glass transitions of quenched and annealed bovine serum albumin aqueous solutions.

Authors:  Kiyoshi Kawai; Toru Suzuki; Masaharu Oguni
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

3.  Infrared absorption study of the heme pocket dynamics of carbonmonoxyheme proteins.

Authors:  Andras D Kaposi; Jane M Vanderkooi; Solomon S Stavrov
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

4.  Biophysical and kinetic characterization of HemAT, an aerotaxis receptor from Bacillus subtilis.

Authors:  Wei Zhang; John S Olson; George N Phillips
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

5.  Role of solvent on protein-matrix coupling in MbCO embedded in water-saccharide systems: a Fourier transform infrared spectroscopy study.

Authors:  Sergio Giuffrida; Grazia Cottone; Lorenzo Cordone
Journal:  Biophys J       Date:  2006-05-19       Impact factor: 4.033

6.  Heme structural perturbation of PEG-modified horseradish peroxidase C in aromatic organic solvents probed by optical absorption and resonance Raman dispersion spectroscopy.

Authors:  Qing Huang; Wasfi Al-Azzam; Kai Griebenow; Reinhard Schweitzer-Stenner
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

7.  Phosphate assisted proton transfer in water and sugar glasses: a study using fluorescence of pyrene-1-carboxylate and IR spectroscopy.

Authors:  Bogumil Zelent; Jane M Vanderkooi; Nathaniel V Nucci; Ignacy Gryczynski; Zygmunt Gryczynski
Journal:  J Fluoresc       Date:  2008-05-22       Impact factor: 2.217

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.