Literature DB >> 35994100

Wide mutational analysis to ascertain the functional roles of eL33 in ribosome biogenesis and translation initiation.

Pilar Martín-Marcos1, Álvaro Gil-Hernández2, Mercedes Tamame3.   

Abstract

An extensive mutational analysis of RPL33A, encoding the yeast ribosomal protein L33A (eL33) allowed us to identify several novel rpl33a mutants with different translational phenotypes. Most of the rpl33a mutants are defective in the processing of 35S and 27S pre-rRNA precursors and the production of mature rRNAs, exhibiting reductions in the amounts of ribosomal subunits and altered polysome profiles. Some of the rpl33a mutants exhibit a Gcd- phenotype of constitutive derepression of GCN4 translation and strong slow growth phenotypes at several temperatures. Interestingly, some of the later mutants also show a detectable increase in the UUG/AUG translation initiation ratio that can be suppressed by eIF1 overexpression, suggesting a requirement for eL33 and a correct 60S/40S subunit ratio for the proper recognition of the AUG start codon. In addition to producing differential reductions in the rates of pre-rRNA maturation and perhaps in r-protein assembly, most of the point rpl33a mutations alter specific molecular interactions of eL33 with the rRNAs and other r-proteins in the 60S structure. Thus, rpl33a mutations cause distinctive effects on the abundance and/or functionality of 60S subunits, leading to more or less pronounced defects in the rates and fidelity of mRNA translation.
© 2022. The Author(s).

Entities:  

Keywords:  GCN4; Ribosome; Translation; Yeast; eL33; rRNA processing

Year:  2022        PMID: 35994100     DOI: 10.1007/s00294-022-01251-1

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   2.695


  69 in total

1.  Role of the yeast ribosomal protein L16 in ribosome biogenesis.

Authors:  Francisco J Espinar-Marchena; José Fernández-Fernández; Olga Rodríguez-Galán; Antonio Fernández-Pevida; Reyes Babiano; Jesús de la Cruz
Journal:  FEBS J       Date:  2016-07-15       Impact factor: 5.542

2.  5-Fluoroorotic acid as a selective agent in yeast molecular genetics.

Authors:  J D Boeke; J Trueheart; G Natsoulis; G R Fink
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

3.  Genetic selection for mutations that reduce or abolish ribosomal recognition of the HIS4 translational initiator region.

Authors:  T F Donahue; A M Cigan
Journal:  Mol Cell Biol       Date:  1988-07       Impact factor: 4.272

Review 4.  Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.

Authors:  Jesus de la Cruz; Katrin Karbstein; John L Woolford
Journal:  Annu Rev Biochem       Date:  2015-02-20       Impact factor: 23.643

5.  Rps3/uS3 promotes mRNA binding at the 40S ribosome entry channel and stabilizes preinitiation complexes at start codons.

Authors:  Jinsheng Dong; Colin Echeverría Aitken; Anil Thakur; Byung-Sik Shin; Jon R Lorsch; Alan G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

6.  Ribosomal protein L35 is required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.

Authors:  Reyes Babiano; Jesús de la Cruz
Journal:  Nucleic Acids Res       Date:  2010-04-14       Impact factor: 16.971

7.  Translation initiation factor 2gamma mutant alters start codon selection independent of Met-tRNA binding.

Authors:  Pankaj V Alone; Chune Cao; Thomas E Dever
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

8.  The structure of the eukaryotic ribosome at 3.0 Å resolution.

Authors:  Adam Ben-Shem; Nicolas Garreau de Loubresse; Sergey Melnikov; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Science       Date:  2011-11-17       Impact factor: 47.728

9.  Ribosomal protein L14 contributes to the early assembly of 60S ribosomal subunits in Saccharomyces cerevisiae.

Authors:  Francisco Espinar-Marchena; Olga Rodríguez-Galán; José Fernández-Fernández; Jan Linnemann; Jesús de la Cruz
Journal:  Nucleic Acids Res       Date:  2018-05-18       Impact factor: 16.971

Review 10.  A new system for naming ribosomal proteins.

Authors:  Nenad Ban; Roland Beckmann; Jamie H D Cate; Jonathan D Dinman; François Dragon; Steven R Ellis; Denis L J Lafontaine; Lasse Lindahl; Anders Liljas; Jeffrey M Lipton; Michael A McAlear; Peter B Moore; Harry F Noller; Joaquin Ortega; Vikram Govind Panse; V Ramakrishnan; Christian M T Spahn; Thomas A Steitz; Marek Tchorzewski; David Tollervey; Alan J Warren; James R Williamson; Daniel Wilson; Ada Yonath; Marat Yusupov
Journal:  Curr Opin Struct Biol       Date:  2014-02-10       Impact factor: 6.809

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