Literature DB >> 18794367

Translation initiation factor 2gamma mutant alters start codon selection independent of Met-tRNA binding.

Pankaj V Alone1, Chune Cao, Thomas E Dever.   

Abstract

Selection of the AUG start codon for translation in eukaryotes is governed by codon-anticodon interactions between the initiator Met-tRNA(i)(Met) and the mRNA. Translation initiation factor 2 (eIF2) binds Met-tRNA(i)(Met) to the 40S ribosomal subunit, and previous studies identified Sui(-) mutations in eIF2 that enhanced initiation from a noncanonical UUG codon, presumably by impairing Met-tRNA(i)(Met) binding. Consistently, an eIF2gamma-N135D GTP-binding domain mutation impairs Met-tRNA(i)(Met) binding and causes a Sui(-) phenotype. Intragenic A208V and A382V suppressor mutations restore Met-tRNA(i)(Met) binding affinity and cell growth; however, only A208V suppresses the Sui(-) phenotype associated with the eIF2gamma-N135D mutation. An eIF2gamma-A219T mutation impairs Met-tRNA(i)(Met) binding but unexpectedly enhances the fidelity of initiation, suppressing the Sui(-) phenotype associated with the eIF2gamma-N135D,A382V mutant. Overexpression of eIF1, which is thought to monitor codon-anticodon interactions during translation initiation, likewise suppresses the Sui(-) phenotype of the eIF2gamma mutants. We propose that structural alterations in eIF2gamma subtly alter the conformation of Met-tRNA(i)(Met) on the 40S subunit and thereby affect the fidelity of start codon recognition independent of Met-tRNA(i)(Met) binding affinity.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18794367      PMCID: PMC2573310          DOI: 10.1128/MCB.01147-08

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  30 in total

1.  GTP-dependent recognition of the methionine moiety on initiator tRNA by translation factor eIF2.

Authors:  Lee D Kapp; Jon R Lorsch
Journal:  J Mol Biol       Date:  2004-01-23       Impact factor: 5.469

2.  Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.

Authors:  Laure Yatime; Yves Mechulam; Sylvain Blanquet; Emmanuelle Schmitt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-13       Impact factor: 11.205

3.  Mutations at a Zn(II) finger motif in the yeast eIF-2 beta gene alter ribosomal start-site selection during the scanning process.

Authors:  T F Donahue; A M Cigan; E K Pabich; B C Valavicius
Journal:  Cell       Date:  1988-08-26       Impact factor: 41.582

Review 4.  The guanine nucleotide-binding switch in three dimensions.

Authors:  I R Vetter; A Wittinghofer
Journal:  Science       Date:  2001-11-09       Impact factor: 47.728

5.  X-ray structure of translation initiation factor eIF2gamma: implications for tRNA and eIF2alpha binding.

Authors:  Antonina Roll-Mecak; Pankaj Alone; Chune Cao; Thomas E Dever; Stephen K Burley
Journal:  J Biol Chem       Date:  2003-12-19       Impact factor: 5.157

6.  Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection.

Authors:  Leos Valásek; Klaus H Nielsen; Fan Zhang; Christie A Fekete; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

7.  The yeast eukaryotic initiation factor 4G (eIF4G) HEAT domain interacts with eIF1 and eIF5 and is involved in stringent AUG selection.

Authors:  Hui He; Tobias von der Haar; C Ranjit Singh; Miki Ii; Bin Li; Alan G Hinnebusch; John E G McCarthy; Katsura Asano
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

8.  Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing.

Authors:  Ivan B Lomakin; Victoria G Kolupaeva; Assen Marintchev; Gerhard Wagner; Tatyana V Pestova
Journal:  Genes Dev       Date:  2003-11-04       Impact factor: 11.361

9.  Yeast translation initiation suppressor sui2 encodes the alpha subunit of eukaryotic initiation factor 2 and shares sequence identity with the human alpha subunit.

Authors:  A M Cigan; E K Pabich; L Feng; T F Donahue
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

10.  Nucleotide pools of growing, synchronized and stressed cultures of Saccharomyces cerevisiae.

Authors:  G Ditzelmüller; W Wöhrer; C P Kubicek; M Röhr
Journal:  Arch Microbiol       Date:  1983-08       Impact factor: 2.552

View more
  30 in total

Review 1.  Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Authors:  Jon R Lorsch; Thomas E Dever
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

2.  β-Hairpin loop of eukaryotic initiation factor 1 (eIF1) mediates 40 S ribosome binding to regulate initiator tRNA(Met) recruitment and accuracy of AUG selection in vivo.

Authors:  Pilar Martin-Marcos; Jagpreet Nanda; Rafael E Luna; Gerhard Wagner; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-07-26       Impact factor: 5.157

3.  Predicting gene phenotype by multi-label multi-class model based on essential functional features.

Authors:  Lei Chen; Zhandong Li; Tao Zeng; Yu-Hang Zhang; Hao Li; Tao Huang; Yu-Dong Cai
Journal:  Mol Genet Genomics       Date:  2021-04-29       Impact factor: 3.291

4.  Protein phosphatase PP1/GLC7 interaction domain in yeast eIF2γ bypasses targeting subunit requirement for eIF2α dephosphorylation.

Authors:  Margarito Rojas; Anne-Claude Gingras; Thomas E Dever
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

5.  Fidelity of HIS4 start codon selection influences 3-amino-1,2,4-triazole sensitivity in GTPase activating protein function defective eIF5.

Authors:  A Charles Antony; Pankaj V Alone
Journal:  J Genet       Date:  2018-09       Impact factor: 1.166

6.  An eIF2α-binding motif in protein phosphatase 1 subunit GADD34 and its viral orthologs is required to promote dephosphorylation of eIF2α.

Authors:  Margarito Rojas; Gabriel Vasconcelos; Thomas E Dever
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-22       Impact factor: 11.205

7.  Coordinated movements of eukaryotic translation initiation factors eIF1, eIF1A, and eIF5 trigger phosphate release from eIF2 in response to start codon recognition by the ribosomal preinitiation complex.

Authors:  Jagpreet S Nanda; Adesh K Saini; Antonio M Muñoz; Alan G Hinnebusch; Jon R Lorsch
Journal:  J Biol Chem       Date:  2013-01-04       Impact factor: 5.157

8.  Phosphorylation of human eukaryotic initiation factor 2γ: novel site identification and targeted PKC involvement.

Authors:  Armann Andaya; Weitao Jia; Masaaki Sokabe; Christopher S Fraser; John W B Hershey; Julie A Leary
Journal:  J Proteome Res       Date:  2011-09-12       Impact factor: 4.466

9.  eIF1 Loop 2 interactions with Met-tRNAi control the accuracy of start codon selection by the scanning preinitiation complex.

Authors:  Anil Thakur; Alan G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-16       Impact factor: 11.205

10.  eIF2γ mutation that disrupts eIF2 complex integrity links intellectual disability to impaired translation initiation.

Authors:  Guntram Borck; Byung-Sik Shin; Barbara Stiller; Aviva Mimouni-Bloch; Holger Thiele; Joo-Ran Kim; Meghna Thakur; Cindy Skinner; Lara Aschenbach; Pola Smirin-Yosef; Adi Har-Zahav; Gudrun Nürnberg; Janine Altmüller; Peter Frommolt; Kay Hofmann; Osnat Konen; Peter Nürnberg; Arnold Munnich; Charles E Schwartz; Doron Gothelf; Laurence Colleaux; Thomas E Dever; Christian Kubisch; Lina Basel-Vanagaite
Journal:  Mol Cell       Date:  2012-10-11       Impact factor: 17.970

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.