| Literature DB >> 35883536 |
Li Yuan1, Chen Liangqi2, Tang Xiyu2, Li Jinyao1,2.
Abstract
Thrombosis has threatened human health in past decades. Bacillus nattokinase is a potential low-cost thrombolytic drug without side-effects and has been introduced into the consumer market as a functional food or dietary supplement. This review firstly summarizes the biodiversity of sources and the fermentation process of nattokinase, and systematically elucidates the structure, catalytic mechanism and enzymatic properties of nattokinase. In view of the problems of low fermentation yield, insufficient activity and stability of nattokinase, this review discusses the heterologous expression of nattokinase in different microbial hosts and summarizes the protein and genetic engineering progress of nattokinase-producing strains. Finally, this review summarizes the clinical applications of nattokinase.Entities:
Keywords: Bacillus nattokinase; functional food and clinical application; molecular modification; molecular structure; physiological and biochemical characteristics
Mesh:
Substances:
Year: 2022 PMID: 35883536 PMCID: PMC9312984 DOI: 10.3390/biom12070980
Source DB: PubMed Journal: Biomolecules ISSN: 2218-273X
Biodiverse sources of nattokinase.
| Strain | Source | References |
|---|---|---|
| Natto | [ | |
| Chungkook-Jang | [ | |
| Doen-Jang | [ | |
| Douchi | [ | |
| Douchi | [ | |
| Fermented soybeans | [ | |
| Douchi | [ | |
| Fermented soy products | [ | |
| Fermented soy products | [ | |
| Soil | [ | |
|
| Thailand | [ |
| Chinese soybean paste | [ | |
| Soil | [ | |
| Milk | [ | |
| Rust | [ | |
|
| Doen-jang | [ |
| Pickle | [ | |
| Fermented milk of | [ | |
| Natto | [ | |
| Moromi | [ | |
| Chinese soybean paste | [ | |
| Ocean | [ |
Figure 1Multiple sequence alignment of nattokinase (AprN) compared with other serine protease homologs. Red shading and red words represent identical and similar residues, respectively. AprE: Subtilisin E; AprJ: Subtilisin BPN′; Apr: Subtilisin Carlsberg.
Figure 2Three-dimensional structure of nattokinase. (A) Calcium binding site of nattokinase. (B) Three-dimensional structure of nattokinase. (C) Nattokinase triple catalyst. Nattokinase structure diagram taken from https://www.rcsb.org/structure/4DWW with modifications (accessed on 14 March 2012).
Liquid fermentation conditions for nattokinase.
| Strain | Carbon source | Nitrogen Source | Fermentation Time (h) | Fermentation pH | Mineral Salt | Fermentation Temperature (℃) | Enzyme Activity | References |
|---|---|---|---|---|---|---|---|---|
| 1% Shrimp shell waste | 1% Shrimp shell wastes | 48 | 7 | 0.1% K2HPO4 0.05% MgSO4·7H2O | 30 | 2.3 FU/mL (fibrin as a substrate) | [ | |
| 2% Maltose | 2% Wheat | 60 | 7 | 0.5% NaCl, 0.1% KH2PO4, 0.4% K2HPO4, 0.05% MgSO4·7H2O, | 30 | 903 IU/mL (fibrin as a substrate) | [ | |
| 5% Rice powder | 4% Soybean powder 0.5% NH4NO3 | 72 | 7 | 0.5% NH4NO3, 0.01% CaC12, 0.7% MgSO4, 0.4% K2HPO4, 0.2% KH2PO4 | 35 | 3980 U/mL (fibrin as a substrate) | [ | |
| 1.5% Shrimp shell powder | - | 48 | 7 | 0.1% K2HPO4, 0.05% MgSO4 | 30 | 0.35 U/mL (casein as a substrate) | [ | |
| 1% Lactose | 0.5% Peptone | 72 | 9 | - | 50 | - | [ | |
|
| 1% Peptone | 0.3% Beef extract | 72 | 7.2–7.4 | 0.04% CaCl2, 0.04% MgSO4, 0.5% NaCl | 37 | - | [ |
| 3% Maltose | 0.5% Soy peptone, 1.5% Yeast extract | 48 | - | 0.15% K2HPO4·3H2O, 0.125% MgSO4·7H2O, 0.025% CaCl2·2H2O, 1% NaCl | 37 | 8645 U/mg (fibrin as a substrate) | [ | |
| 2% Dextrin | 0.15% Yeast extract 2% fibrin, 0.5% Peptone | 72 | 7.2 | 0.4% K2HPO4, 0.04% NaH2PO4, 0.3% CaCO3 | 37 | 407 U/mg (fibrin as a substrate) | [ | |
| 0.2% Galactose | 1.4% Tryptone | 72 | 7.2 | 0.1% KH2PO4, 0.2% Na2HPO4, 0.02% MgSO4, 0.3% CaCO3, 0.001% FeCl3, 0.001% LiSO4 | 37 | 447.4 U/mg (fibrin as a substrate) | [ |
Methods of nattokinase activity determination.
| Method | Principle | Feature | Reference |
|---|---|---|---|
| Fibrin plate method | Nattokinase hydrolyzes fibrin on the plate to form a hydrolysis circle | The accuracy is not high, only used for preliminary characterization of enzyme activity | [ |
| Fibrinolysis method | A standard curve was established using the time taken for urokinase to dissolve a certain amount of fibrin with different activity units. | Simple with limited precision | [ |
| Tetrapeptide substrate method | Hydrolysis of Suc-Ala-Ala-Pro-Phe-pNA by nattokinase to produce chromogenic nitroaniline | Simple and fast, high sensitivity; only suitable for pure enzymes | [ |
| HPLC method | The product of nattokinase hydrolysis of peptide A (LKRLKRFLKRLK) was detected by a diode array detector and an Eclipse XDB-C18 column. | The operation process is complicated | [ |
| Milk plate method | Nattokinase hydrolyzes casein on the plate to form a hydrolysis circle | Simple and fast, used for preliminary characterization of nattokinase activity | [ |
| Serum plate method | Nattokinase hydrolyzes fibrin in serum to form hydrolysis circle | Low cost, convenient and quick; easily affected by the quality of the prepared plate. | [ |
| Enzyme-linked immunosorbent method | Determination of nattokinase activity by specific enzyme-linked adsorption | High sensitivity and specificity; complicated operation and high cost | [ |
| UV spectrophotometer method | Determination of the fibrinolytic activity of nattokinase by measuring the change in absorbance of nattokinase fibrin hydrolysate at 275 nm | The operation process is complicated | [ |
Enzymatic properties of nattokinase from different microorganisms.
| Strain | MW | Optimum pH | Optimum Temperature | Substrate Specificity | Specific Inhibitor | Metal Agonist | Metal Inhibitor | References |
|---|---|---|---|---|---|---|---|---|
| 29 | 8 | 40 | - | - | Zn2+ | Al3+, Fe3+ | [ | |
| 31 | - | - | H-D-Val-Leu-Lys-pNA | Chymostatin | - | Zn2+ | [ | |
| 28.2 | 10.5 | 70 | H-D-Val-Leu-Lys-rNA | PMSF | - | - | [ | |
| 29 | 10 | 40 | - | PMSF | - | Cu2+, Zn2+ | [ | |
| 31.5 | 7.8 | 55 | N-succinyl-Ala-Ala-Pro-Phe-pNA | PMSF, NBS | - | - | [ | |
| 28 | 9 | 48 | N-succinyl-Ala-Ala-Pro-Phe-pNA | PMSF | - | - | [ | |
| 30 | 8 | 55 | N-Succinyl-Ala-Ala-Pro-Phe-pNA | PMSF, SBTI | - | Cu2+, Fe2+, Sn2+, Ag+, Ti2+ | [ | |
| 28 | 8.5 | 55 | - | PMSF | - | - | [ | |
| 30 | 8 | 50 | - | PMSF | Al3+, Zn2+ | Mn2+, Ba2+ | [ | |
| 28–30 | 7 | 50 | - | - | - | - | [ | |
| 35 | 9.5 | 65 | - | - | - | - | [ | |
| 27.5 | 8.5 | 50 | - | PMSF | Co2+, Ba2+ | Fe3+, Hg2+, Cu2+, Zn2+ | [ | |
| 28–30 | 8 | 50 | - | PMSF | - | Ca2+, Cu2+ | [ | |
| 21–24 | 7 | 50 | N-benzoyl-Val-Gly-Arg-pNA and D-Val-Leu-Lys-pNA | PMSF | Fe2+ | Fe2+ | [ | |
| 27 | 5 | 45 | - | PMSF | Mn2+ | Ba2+, Mg2+ | [ | |
| - | - | - | - | - | - | Cu2+, Ca2+ | [ | |
| 29 | 11 | 47 | Met-Suc-Arg-Pro-Tyr-pNA(S-2586) | PMSF | Mg2+ | Zn2+, Cu2+ | [ | |
| 27.7 | 9 | 65 | - | SDS | Mg2+ | - | [ | |
| - | 7 | 40 | - | - | - | - | [ | |
| 29 | 7 | 30 | N-Succinyl-Ala-Ala-Pro-Phe-pNA (S7338) | PMSF, EDTA | Ca2+, Zn2+, Co3+ | Hg2+, Cu2+ | [ | |
| 26 | - | - | - | - | - | - | [ | |
| 28 | 9 | 50 | - | PMSF | Zn2+, Fe2+, Hg2+ | - | [ |
PMSF, Phenylmethylsulfonyl fluoride; NBS, N-Bromosuccinimide; SBTI, Trypsin inhibitor; SDS, Sodium dodecyl sulfate; EDTA, Ethylene diamine tetraacetic acid.
Enzyme engineering to improve the enzymatic properties of nattokinase.
| Strains | Molecular Modification Strategy | Enzyme Activity Assay Method | Effect | References |
|---|---|---|---|---|
| Mutation based on the literature | Tetrapeptide substrate method | The I31L mutant increased catalytic efficiency | [ | |
| Mutation based on the literature | Tetrapeptide substrate method | The M222A/I31L mutant increased oxidative stability | [ | |
| Surface charge engineering, sequence alignment, and mutation based on the literature | Tetrapeptide substrate method | The Q59E mutant increased specific activity | [ | |
| Surface charge engineering, sequence alignment, and mutation based on the literature | Tetrapeptide substrate method | The S78T mutant improved acid stability | [ | |
| Surface charge engineering, sequence alignment, and mutation based on the literature | Tetrapeptide substrate method | The Y217K mutant enhanced acid and thermal stability | [ | |
| Surface charge engineering, sequence alignment, and mutation based on the literature | Tetrapeptide substrate method | The N218D mutant improved thermal stability | [ | |
| Surface charge engineering, sequence alignment, and mutation based on the literature | Tetrapeptide substrate method | The S78T/Y217K mutant improved acid stability | [ | |
| Non-oxidative mutation of amino acid residues surrounding the catalytic residue Ser221 | Fibrin plate method and tetrapeptide substrate method | The T220S mutant increased oxidative stability | [ | |
| Non-oxidative mutation of amino acid residues surrounding the catalytic residue Ser221 | Fibrin plate method and tetrapeptide substrate method | The M222A mutant increased oxidative stability | [ | |
| Deletion of protease genes and construction of high-efficiency expression system of nattokinase (PHY300PLK + P43 + SsacC + aprN + TamyL) | UV spectrophotometer method | Improved the synthesis efficiency of nattokinase in | [ | |
| Manipulation of signal peptides and signal peptidases (signal peptide of AprE and signal peptidase SipV) | UV spectrophotometer method | Enhanced secretion efficiency of nattokinase in | [ | |
| Tandem promoter (PHpaII-PHpaII-PP43) | Fibrin plate method and UV spectrophotometer method | Improved the synthesis efficiency of nattokinase in | [ | |
| Sequence trimming and nucleotide optimization of the conserved region of the promoter PsrfA | HPLC method | High-efficiency self-inducible expression of nattokinase in | [ | |
| An optimized single-stranded Shine–Dalgarno (SD) sequence was inserted into the hairpin loop for better ribosome recognition and recruitment. | Milk plate method | Increased the fermentation yield of nattokinase in | [ | |
| Deletion of protease genes | Tetrapeptide substrate method | Increased the fermentation yield of nattokinase in | [ |
Figure 3Thrombolytic mechanism of nattokinase.