| Literature DB >> 35455473 |
Silvana Alfei1, Anna Maria Schito2.
Abstract
β-lactam antibiotics (BLAs) are crucial molecules among antibacterial drugs, but the increasing emergence of resistance to them, developed by bacteria producing β-lactamase enzymes (BLEs), is becoming one of the major warnings to the global public health. Since only a small number of novel antibiotics are in development, a current clinical approach to limit this phenomenon consists of administering proper combinations of β-lactam antibiotics (BLAs) and β-lactamase inhibitors (BLEsIs). Unfortunately, while few clinically approved BLEsIs are capable of inhibiting most class-A and -C serine β-lactamases (SBLEs) and some carbapenemases of class D, they are unable to inhibit most part of the carbapenem hydrolyzing enzymes of class D and the worrying metallo-β-lactamases (MBLEs) of class B. Particularly, MBLEs are a set of enzymes that catalyzes the hydrolysis of a broad range of BLAs by a zinc-mediated mechanism, and currently no clinically available molecule capable of inhibiting MBLEs exists. Additionally, new types of alarming "superbugs", were found to produce the New Delhi metallo-β-lactamases (NDMs) encoded by increasing variants of a plasmid-mediated gene capable of rapidly spreading among bacteria of the same species and even among different species. Particularly, NDM-1 possesses a flexible hydrolysis mechanism that inactivates all BLAs, except for aztreonam. The present review provides first an overview of existing BLAs and the most clinically relevant BLEs detected so far. Then, the BLEsIs and their most common associations with BLAs already clinically applied and those still in development are reviewed.Entities:
Keywords: Ambler classification; carbapenemases; clinical and preclinical trials; clinically approved BLEsIs; metallo β-lactamase enzymes (MBLEs); serine β-lactamase enzymes (SBLEs); β-lactam antibiotics (BLAs); β-lactamase enzymes (BLEs); β-lactamase enzymes inhibitors (BLEsIs)
Year: 2022 PMID: 35455473 PMCID: PMC9031764 DOI: 10.3390/ph15040476
Source DB: PubMed Journal: Pharmaceuticals (Basel) ISSN: 1424-8247
Figure 1Structures drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002), of representative β-lactams with the correct numbering indicated on the basic ring systems. Penicillin scaffold (a); cephalosporin scaffold (b); carbapenem scaffold (c); monobactam scaffold (d).
Figure 2β-lactam core structures, drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002), with the correct numbering indicate the basic ring systems. Penams (a), penems (b), cepham (c) and cephem (d), including penams (1), carbapenams (2) oxapenams (3), penems (4), carbapenem (5), oxapenem (6), cephams (7), carbacepham (8), oxacepham (9), cephems (10), carbacephem (11), and oxacephem (12).
Main BLAs classified for type of β-lactam ring, generation, and spectrum of action. Main BLEsIs, and the most common associations BLAs/BLEsIs.
| BLAs | Penicillins (penams) | Narrow spectrum | β-lactamase sensitive | benzylpenicillin (G) # |
| β-lactamase resistant | cloxacillin #, dicloxacillin flucloxacillin; oxacillin; nafcillin methicillin ‡ | |||
| Extended spectrum | aminopenicillins | amoxicillin # ampicillin #; pivampicillin | ||
| carboxypenicillins | ticarcillin carbenicillin ‡;carindacillin ‡ temocillin ‡ | |||
| ureidopenicillins | piperacillin; azlocillin ‡; mezlocillin ‡ | |||
| Others | mecillinam; pivmecillinam, sulbenicillin ‡ | |||
| Carbapenems (penems) | ertapenem 1; doripenem 2; imipenem 2; meropenem 2; biapenem ‡; panipenem faropenem 3; ritipenem 3,§ | |||
| Cephems | 1st generation | cefazolin #; cefalexin #; cefadroxil; cefapirin; cefazedone ‡ | ||
| 2nd generation | cefaclor, cefprozil, cefuroxime, cefuroxime axetil, cefamandole ‡, cefonicid ‡; ceforanide ‡; cefuzonam ‡; cefoxitin, cefotetan cefminox ‡; cefbuperazone ‡; cefmetazole ‡; loracarbef ‡ | |||
| 3rd generation | cefixime #; ceftriaxone #; cefotaxime #; ceftazidime #,2; cefoperazone ‡,2 cefdinir; cefcapene; cefdaloxime; ceftizoxime; cefmenoxime cefpiramide; cefpodoxime; ceftibuten; cefditoren; cefotiam ‡ cefetamet ‡; cefodizime ‡; cefpimizole ‡; cefsulodin ‡; cefteram ‡ ceftiolene ‡; | |||
| 4th generation | cefepime; cefozopran ‡; cefpirome; cefquinome ‡ | |||
| 5th generation | ceftaroline fosamil; ceftolozane; ceftobiprole | |||
| siderophore | cefiderocol # | |||
| veterinary | ceftiofur; cefquinome; cefovecin | |||
| Monobactams | aztreonam, tigemonam ‡; carumonam ‡; nocardicin A ‡ | |||
| BLEsIs | sulbactam, tazobactam, clavulanic acid, non-β-lactams (relebactam, avibactam, vaborbactam) | |||
| Combinations | amoxicillin/clavulanic acid #, ampicillin/flucloxacillin, ampicillin/sulbactam (sultamicillin) | |||
# WHO-EM = The World Health Organization model list of essential medicines, which is published by the WHO and contains the medications considered to be most effective and safe to meet the most important needs in a health system; ‡ withdrawn from market, 1 carbapenems, 2 antipseudomonal, 3 penems, § never went to phase III clinical trials.
Scheme 1Inactivation of BLAs through the hydrolytic action of SBLEs. The Scheme was realized by us using the ChemDraw Ultra 7.0 software (Chem Office 2002).
Scheme 2Inactivation of carbapenems through the hydrolytic action of MBLEs. The Scheme has been realized by us using the ChemDraw Ultra 7.0 software (Chem Office 2002).
β-lactamase enzymes (BLEs) classification.
| Enzymes | Mechanism of Action | Ambler Class | Family | More Common Enzymes | Producers |
|---|---|---|---|---|---|
| BLEs | SBLEs | A | KPCs * | KPC-2 | |
| KPC-3 | |||||
| GESs | GES-1 ** |
| |||
| GES2 * | |||||
| GES-3 ** | |||||
| GES-4 ** | |||||
| GES-5 * | |||||
| GES-6 * | |||||
| GES-7 ** | |||||
| GES-8 ** | |||||
| GES-9 ** | |||||
| CTX-Ms ** | CTX-M-1 | ||||
| CTX-M-2 | |||||
| CTX-M3 | |||||
| CTX-M-8 | |||||
| CTX-M-9 | |||||
| CTX-M-25 | |||||
| CTX-M-14 | |||||
| SHVs | SHV-2b ** | ||||
| SHV-2br ** | |||||
| SHV-2be ** | |||||
| TEMs | TEM-2 ** |
| |||
| TEM-3 ** | |||||
| TEM-4 ** | |||||
| D (CHDLs §) | OXAs * | OXA-48 |
| ||
| OXA-17 |
| ||||
| OXA-23 | |||||
| OXA-24/40 | |||||
| OXA-51 | |||||
| OXA-58 | |||||
| OXA-143 | |||||
| OXA-235 | |||||
| C (also AmPC a) | ACTs | ACT-1 *** |
| ||
| DHAs | DHA-1 *** | ||||
| CMYs | CMY-2 *** | ||||
| CMY-10 *** | |||||
| ADCs | ADC-68 *** | ||||
| MBLEs 1 | B | B1 *,2 | BcII |
| |
| CcrA |
| ||||
| IMP-1 |
| ||||
| VIM-1 |
| ||||
| BlaB |
| ||||
| Bla2 |
| ||||
| SPM-1 |
| ||||
| NDM-1 |
| ||||
| GIM-1 |
| ||||
| SIM-1 |
| ||||
| DIM-1 |
| ||||
| TMB-1 |
| ||||
| KHM-1 |
| ||||
| B2 *,3 | CpHA |
| |||
| Shf-1 |
| ||||
| ImiS |
| ||||
| B3 *,2 | L-1 |
| |||
| FEZ-1 |
| ||||
| BJP-1 |
| ||||
| AIM-1 |
| ||||
| THIN-B |
| ||||
| GOB-1 |
| ||||
| CAU-1 |
| ||||
| CAR-1 |
| ||||
| SMB-1 |
| ||||
| POM-1 |
| ||||
| CRB11 |
|
ESSBLEs = extended spectrum serine β-lactamases enzymes (enzymes that confer bacteria resistance to extended-spectrum cephalosporins; KPCs = K. pneumoniae carbapenemases; GESs = Guiana extended-spectrum β-lactamases; CTX-Ms = extended-spectrum β-lactamases active on cefotazime (cefotazimase-Munnich); SHVs = sulfhydryl variable; TEM = from the Patient’s name: Temoneira; VIMs = Verona integron-encoded metallo-β-lactamases; NDMs = New Delhi metallo-β-lactamases; IMPs = imipenemases; OXAs = oxacillinase group of β-lactamases able to hydrolyze oxacillin; a AmpC = cephalosporinases that cannot be inhibited by clavulanate; ACTs, DHAs, CMYs, ADCs = AmpC cephalosporinases that hydrolyze carbapenems; * carbapenemases; ** ESSBLs unable to hydrolyze carbapenems; § CHDLs = carbapenem-hydrolyzing class D β-lactamases recently discovered that are capable of hydrolyzing carbapenems; *** specific BLEs of class C, which are capable of hydrolyzing carbapenems; 1 inactivated by metal chelators such as EDTA; 2 inhibits penicillins, cephalosporins, and carbapenems; 3 inhibits only carbapenems.
Long-standing, recently approved, and not yet approved BLEsIs. The chemical structures were drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002).
| BLEsIs | Chemical Structure | Mechanism of Action | Antibiotic Association | Target Infections | Adverse Effects | Target BLEs |
|---|---|---|---|---|---|---|
| Clavulanic Acid (CA) *,0 |
| Irreversible bond to | Amoxicillin | Diabetic foot | Vomiting | class A ** |
| Sulbactam *,0 |
| Ampicillin Cefoperazone | VAP | Nausea | ↓ class A | |
| Tazobactam *,0 |
| Piperacillin | Cellulitis | Diarrhea (7–11%) | ↑ CTX-M | |
| Ceftolozane | cIAI | Headache (5.8%) Constipation (3.9%) Hypertension (3%) Nausea (2.8%) Diarrhea (1.9%) | ||||
| Enmetazobactam *,2,$ |
| Irreversible bond to | Cefepime | cIAI | N.R. | KPCs |
| 6-methylidene |
| Acylation of serine-70 | Piperacillin | N.R. | TEM-1 | |
| LN-1-255 *,2,$ |
| Electrostatic/hydrogen-bonding interaction close to the serine | Imipenem | N.R. | OXA-23 | |
| Avibactam §,** |
| Reversible interaction with the serine in the | Ceftazidime | cUTI (pyelonephritis) | ↓Kidney function Gastrointestinal adverse effects | KPCs |
| Aztreonam $$ | ||||||
| Relebactam §,** |
| Imipenem | HAP | Nausea (6%) | KPCs | |
| Zidebactam §,§§,2,$ |
| Antibacterial activity binding to Gram-negative PBP2 and/or PBP3 3 | Cefepime | cUTI | Well-tolerated | K1 |
| Durlobactam §,2,4,$ |
| Imipenem | Headache | AmpCs | ||
| Nacubactam §,2,$ |
| Meropenem | Headache (27.3%) | KPCs | ||
| Aztreonam $$ | NDMs | |||||
| ETX-1317 §,2,$ |
| Cefpodoxime proxetil (CPDP) 5 | cUTI | N.R. | KPCs | |
| WCK5153 §,2,$ |
| Antibacterial activity binding to | N.R. | N.R. | N.R. | class A |
| WCK4234 §,2,$ |
| No antibacterial activity | Meropenem | cIAI | N.R. | KPCs |
| ANT3310 §,2,$ |
| cUTI | Well-tolerated | KPCs | ||
| GT-055 §,2,$ |
| Antibacterial activity binding to | GT-1 6 | ESSBLEs | ||
| Vaborbactam #,** |
| Stable covalent bond | Meropenem | cUTI | Headache (8.1%) Inflammation at the injection site (2.2%) | KPCs |
| Taniborbactam #,2,$ |
| Reversible covalent | Cefepime | Headache 7
| ESSBLEs | |
| Ledaborbactam etzadroxil |
| Reversible covalent | Ceftibuten | cUTI | Well-tolerated | ESSBLEs AmpCs |
| Xeruborbactam |
| Reversible covalent | Aztreonam | cUTI | N.R. | KPCs |
| ANT-2681 ***,2,$ |
| Acts as metal tripping agents or binding to the metal ion(s)while still bound to the enzyme creating a ternary complex | Meropenem | Infections by | N.R. | NDM-1 |
↑ = increased; ↓ = diminished; cIAI = complicated intraabdominal infections; cUTI = complicated urinary tract infections; VAP = ventilator-associated pneumonia; HAP = hospital-acquired pneumonia; * β-lactam inhibitors; $ not yet marketed; $$ aztreonam is the only approved and marketed monobactam not susceptible to MBLEs, whose combination with avibactam or nacubactam is not marketed; ** recently developed and approved; *** 3-(sulfonamido)thiazole-4-carboxylic acid non-β-lactam inhibitor; § di-azo-bicyclo-octane (DBO) non-β-lactam inhibitors; # non-β-lactam inhibitors derived from boronic acid; §§ bicyclo-acyl hydrazide non-β-lactam inhibitor; 0 no inhibition of carbapenemases; 1 in pediatric patients; 2 under investigation in preclinical/clinical trials; 3 penicillin-binding proteins (PBPs); 4 administered with sulbactam 1/1 in clinical trials; 5 a clinically approved antibiotic that is hydrolyzed in vivo to release cefpodoxime (CPD); 6 a new β-lactam antibiotic; 7 500 mg single dose; 8 500 mg multiple dose.
Main BLEIs/BLAs associations, target bacteria producing BLEs, and other clinical aspects (route of administration and pharmacokinetic data). Except for those with different specifications, all numeric data refer to the reported BLEsI. The references of works used as sources of the information reported in this Table have been included in the main text.
| BLAs/BLEsIs | Generic Susceptible Bacteria | Absorption | Plasma Protein Binding | Elimination Route | Half-Life | ||
|---|---|---|---|---|---|---|---|
| Amoxicillin/CA * | MPPC 1 | 25% | 40–65% urine | 45–90 min | |||
| Ticarcillin/CA * | MPPC 1 | MPPC 1 | 20–25% | 35–45% urine | 1 h 2 | ||
| Ampicillin/sulbactam * | MPPC 1 | MPPC 1 | 38% reversibly | 75–85% urine | ~1 h | ||
| Sultamicillin * | Hydrolytically cleaved to | 29% | 41–60% urine | 1.4 h (OT) | |||
| MPPC 1 | MPPC 1 | ||||||
| Cefoperazone/sulbactam * | MPPC 1 | 38% | 75–85% urine | ~1 h | |||
| Piperacillin/tazobactam * | MPPC 1 | 30% | 80% urine | 0.7–1.2 h | |||
| Ceftolozane/tazobactam * | MPPC 1 = 18–18.4 µg/mL | 0.9–1.0 h | |||||
| Enmetazobactam/cefepime | MPPC 1 | Insignificant | N.R. | N.R. | |||
| 6-methylidene penems/piperacillin | MPPC 1 | N.R. | N.R. | 0.1–0.5 h | |||
| LN-1-255/imipenem | MPPC 1 | N.R. | N.R. | 0.4 h | |||
| Ceftazidime/avibactam | MPPC 1 | 5.7–8.2% | 95% urine | 2.2–2.7 h | |||
| Aztreonam/avibactam/ceftazidime | MBLEs producing | N.R. | N.R. | N.R. | N.R. | ||
| Imipenem/cilastatin/relebactam | MPPC 1 | 22% | 90% urine | 1.7 h | |||
| Vaborbactam | MPPC 1 | N.R. | 96.6% urine (MD) | 1.7 h (MD) | |||
| Meropenem/vaborbactam | MPPC 1 | N.F. | 99% urine | 1.65 h | |||
| Meropenem/vaborbactam a | MPPC 1 | 33% | 75–95% urine | 2.25 h | |||
| Taniborbactam | CRE | MPPC 1 | N.R. | 64–67% urine 8 | 3.5–5.8 h 8 | ||
| Ceftibuten/VNRX-7145 | CRE | MPPC 1 | N.R. | N.R. | 4.6 min | ||
| 5 mg/Kg to rat VNRX-7145 | 1.6 min | ||||||
| Aztreonam/QPX-7728 | CRE | MPPC 1 | N.R. | N.R. | 1.6, 1.4, 1.3 h | ||
| Cefepime/zidebactam | MPPC 1 | N.F. | >95% urine | 2.5–2.7 h | |||
| Cefpodoxime proxetil /ETX1317 | MPPC 1 | MPPC 1 | N.R. | N.R. | 1.1 h | 0.4 h | |
| Meropenem/ANT3310 | MPPC 1 | <7% | N.F. | 0.64 h | |||
| Meropenem/cilastatin/WCK4234 |
| MPPC 1 | N.F. | N.F. | N.F. | ||
| GT-1/GT-055 | CR | N.F. | N.F. | N.F. | N.F. | ||
| GT-1/GT-055 |
| MPPC 1 | N.F. | N.F. | N.F. | ||
| GT-1/GT-055 |
| MPPC 1 | N.F. | N.F. | N.F. | ||
| Meropenem/nacubactam | MPPC 1 | N.F. | urine | 2.36 h 8 | |||
| Aztreonam/nacubactam | MBLEs producers | In-vitro studies | N.R. | N.R. | N.R. | ||
| Imipenem/cilastatin | CRAB | MPPC 1 | N.R. | 70%/65–98% urine | 1.8/2.3 h | ||
| ANT-2681/meropenem | MPPC 1 | 76% | 30% urine | 5.6 h | |||
| MPPC 1 | 4.2 h | ||||||
* Commercialized; 1 mean peak plasma concentrations; 2 intravenous formulations; 3 intramuscular formulations; 4 administered dosage BLEsIs/BLAs; 5 intravenous infusions of 30 min every 6 h; 6 referred to the vaborbactam association; 7 intravenous infusions of 3 h every 8 h; 8 single intravenous infusion; 9 multiple intravenous infusion; 10 single intravenous infusions of 60 min in healthy subjects; 11 dosage imipenem/cilastatin; 12 infused over 3 h every 6 h; 13 dosage durlobactam/sulbactam; 14 infused over 1 h every 6 h; a from drug label; MD = multiple dose; SD = single dose; IVI = intravenous infusion; IMI = intramuscular injection; N.A. = not available; MSSA = methicillin susceptible S. aureus; NRF = normal renal function; RI = renal impairments; MSSE = methicillin susceptible S. epidermidis; CR = carbapenem resistant; CRE = carbapenem resistant Enterobaceriaceae; CRPA = carbapenem resistant P. aeruginosa; CRAB = carbapenem resistant A. baumannii; AOB% = absolute oral bioavailability percentage. N.F. = not found.
Figure 3Chemical structure of tebipenem (a) and of the tebipenem prodrug tebipenem pivoxil (b). The chemical structures were drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002).
Figure 4Chemical structure of 6-(6,7-dihydro-5H-cyclopenta[d]imidazo[2,1-b]thiazol-3-ylmethylene)-7-oxo-4-thia-1-aza-bicyclo [3.2.0] hept-2-ene-carboxylate, sodium salt. The chemical structure was drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002).
Figure 5Chemical structure of 3-acetoxymethyl-7-(hydroxy-phenylacetyl-amino)-8-oxo-5-thia-1-aza-bicyclo [4.2.0] oct-2-ene-2-carboxylate, sodium salt. The chemical structure was drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002).
Figure 6Structure of ANT-431 (C9H7N3O4S2, MW = 285.3), IUPAC name 5-(pyridin-3-ylsulfonylamino)-1,3-thiazole-4-carboxylic acid. The chemical structure was drawn using the ChemDraw Ultra 7.0 software (Chem Office 2002).
Figure 7Percentages of BLEsIs developed so far at the various stage of progress. CTs = clinical trials.
Figure 8Percentages of approved BLEsIs active on the main classes of carbapenemases (class A KPCs, class D OXAs and class B, metallo carbapenemases).
Figure 9Percentages of all developed BLEsIs active on the different classes of BLEs.
Figure 10Percentages of recently developed BLEsIs active on the different classes of carbapenemases.
Figure 11Percentages of all combinations active on the different carbapenem-resistant bacterial species producing SBLEs (a), and those of combinations that were affective on the same species producing MBLEs (b).