| Literature DB >> 35337181 |
Silvana Alfei1, Guendalina Zuccari1.
Abstract
The increasing emergence of bacteria producing β-lactamases enzymes (BLEs), able to inactivate the available β-lactam antibiotics (BLAs), causing the hydrolytic opening of their β-lactam ring, is one of the global major warnings. According to Ambler classification, BLEs are grouped in serine-BLEs (SBLEs) of class A, C, and D, and metal-BLEs (MBLEs) of class B. A current strategy to restore no longer functioning BLAs consists of associating them to β-lactamase enzymes inhibitors (BLEsIs), which, interacting with BLEs, prevent them hydrolyzing to the associated antibiotic. Worryingly, the inhibitors that are clinically approved are very few and inhibit only most of class A and C SBLEs, leaving several class D and all MBLEs of class B untouched. Numerous non-clinically approved new molecules are in development, which have shown broad and ultra-broad spectrum of action, some of them also being active on the New Delhi metal-β-lactamase-1 (NDM-1), which can hydrolyze all available BLAs except for aztreonam. To not duplicate the existing review concerning this topic, we have herein examined BLEsIs by a chemistry approach. To this end, we have reviewed both the long-established synthesis adopted to prepare the old BLEsIs, those proposed to achieve the BLEsIs that are newly approved, and those recently reported to prepare the most relevant molecules yet in development, which have shown high potency, providing for each synthesis the related reaction scheme.Entities:
Keywords: metal-β-lactamases; multi-drug resistant (MDR) bacteria; optimized synthetic procedures; serine β-lactamases; β-lactam antibiotics; β-lactamase enzymes; β-lactamase enzymes inhibitors
Year: 2022 PMID: 35337181 PMCID: PMC8954882 DOI: 10.3390/ph15030384
Source DB: PubMed Journal: Pharmaceuticals (Basel) ISSN: 1424-8247
Figure 1The β-lactam core structures. Penams (1), carbapenams (2), oxapenams (3) (a); penems (4), carbapenems (5), oxapenems (6) (b); cephems (7), carbacephems (8), oxacephem (9) (c); cepham (10), carbacepham (11), oxacephem (12) (d); monobactam (13) (e).
Figure 2Chemical structure of carbapenems.
The most relevant BLAs developed until now.
| (BLAs) * | Penicillins | Narrow spectrum | β-lactamase sensitive (1st generation) | benzylpenicillin (G) # |
| β-lactamase resistant (2nd generation) | cloxacillin #, dicloxacillin flucloxacillin; oxacillin; nafcillin methicillin ‡ | |||
| Extended spectrum | aminopenicillins | amoxicillin # ampicillin #; pivampicillin | ||
| carboxypenicillins | ticarcillin carbenicillin ‡;carindacillin ‡ temocillin ‡ | |||
| ureidopenicillins | piperacillin; azlocillin ‡; mezlocillin ‡ | |||
| Others | mecillinam; pivmecillinam, sulbenicillin ‡ | |||
| carbapenems | ertapenem 1; doripenem 2; imipenem 2; meropenem 2; biapenem ‡; panipenem faropenem 3; ritipenem 3,§ | |||
| cephems | 1st generation | cefazolin #; cefalexin #; cefadroxil; cefapirin; cefazedone ‡ | ||
| 2nd generation | cefaclor, cefprozil, cefuroxime, cefuroxime axetil, cefamandole ‡, cefonicid ‡;, ceforanide ‡;, cefuzonam ‡;, cefoxitin, cefotetan cefminox ‡; cefbuperazone ‡; cefmetazole ‡; loracarbef ‡ | |||
| 3rd generation | cefixime #; ceftriaxone #; cefotaxime #; ceftazidime #,2; cefoperazone ‡,2 cefdinir; cefcapene; cefdaloxime; ceftizoxime; cefmenoxime cefpiramide; cefpodoxime; ceftibuten; cefditoren; cefotiam ‡ cefetamet ‡; cefodizime ‡; cefpimizole ‡; cefsulodin ‡; cefteram ‡ ceftiolene ‡; flomoxef ‡; latamoxef ‡ | |||
| 4th generation | cefepime; cefozopran ‡; cefpirome; cefquinome ‡ | |||
| 5th generation | ceftaroline fosamil; ceftolozane; ceftobiprole | |||
| siderophore | cefiderocol # | |||
| veterinary | ceftiofur; cefquinome; cefovecin | |||
| monobactams | aztreonam, tigemonam ‡; carumonam ‡; nocardicin A ‡ | |||
* β-lactam antibiotics; # WHO-EM = The World Health Organization model list of essential medicines, which is published by the WHO, and contains the medications considered to be most effective and safe to meet the most important needs in a health system; ‡ withdrawn from market; 1 carbapenems; 2 antipseudomonal; 3 penems; § never to phase III clinical trials.
Scheme 1Inactivation of BLAs through the hydrolytic action of SBLEs.
The most clinically relevant BLEs grouped according to Ambler classification, the producer bacteria, and the hydrolysed or resistant BLAs.
| BLEs | Ambler Class | Subclass | Producer Bacteria | Susceptible BLAs | Not Susceptible BLAs |
|---|---|---|---|---|---|
| SBLEs ESSBLEs | A | KPCs * | carbapenems | N.R. | |
| GESs |
| N.R | N.R. | ||
| CTX-Ms ** |
| cefotaxime | N.R | ||
| SHVs |
| aztreonam | cefozitin | ||
| TEMs |
| penicillin | 3rd cefotaxime | ||
| D | OXAs * | ampicillin | N.R. | ||
| C | ACTs a |
| cephalothin | N.R. | |
| DHAs a | |||||
| CMYs a | |||||
| ADCs a | |||||
| MBLEs 1 | B | B1 *,2 | penicillin | ||
| B2 *,3 | carbapenems | penicillin | |||
| B3 *,2 | penicillin |
ESSBLEs = extended spectrum serine β-lactamases enzymes confer to producing bacteria resistance to expanded-spectrum (extended-spectrum) cephalosporins; KPCs = K. pneumoniae carbapenemases; GESs = Guiana extended-spectrum β-lactamases; CTX-Ms = extended-spectrum β-lactamases active on cefotazime (cefotazimase-Munnich); SHVs = Sulfhydryl variable; TEM = from the Patient’s name: Temoneira; OXAs = oxacillinase group of β-lactamases able to hydrolyse oxacillin; a AmpC cephalosporinases that cannot be inhibited by clavulanate, some of which are capable to hydrolyse carbapenems; * carbapenemases; ** ESSBLs unable to hydrolyse carbapenems; § CHDLs = carbapenem-hydrolysing class D β-lactamases recently discovered which are capable of hydrolysing carbapenems; 1 inactivated by metal chelators such as EDTA; 2 inhibits penicillins, cephalosporins, and carbapenems; 3 inhibits only carbapenems.
Long-standing or recently approved BLEsIs, molecules still at preclinical and clinical trials, and molecules still at the early stages of experimentation.
| BLEsIs | Chemical Structure | Not Carbapanemases SBLEs | Carbapanemases SBLEs | MBLEs | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class A | Class C | Class D | Class A | Class D | Class C | Class B | ||||||
| GES | AmpC | N.R. | KPC | OXA23 | OXA | OXA-48 | N.R. | NDM | VIM | IMP | ||
| Clavulanic Acid (CA) *,1 |
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| Sulbactam *,1 |
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| Tazobactam *,1 |
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| Tebipenem pivoxil *,1,2 |
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| N.R. |
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| Enmetazobactam *,$ |
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| 6-methylidene |
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| LN-1-255 *,$ |
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| N.R. |
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| Avibactam §,** |
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| N.R. |
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| Relebactam §,** |
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| N.R. |
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| Zidebactam §,§§,3,$ |
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| N.R. |
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| Durlobactam §,3,4,$ |
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| N.R. |
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| Nacubactam §,3,$ |
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| N.R. | N.R. |
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| ETX-1317 §,3,$ |
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| N.R. | N.R. |
| N.R. |
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| WCK-5153 §,3,$ |
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| WCK-4234 §,3,$ |
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| N.R. |
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| ANT-3310 §,3,$ |
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| N.R. |
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| GT-055 §,3,$ |
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| N.R | N.R | N.R | N.R. |
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| Vaborbactam #,** |
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| N.R. |
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| Taniborbactam #,3,$,## |
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| N.R. | N.R. |
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| Ledaborbactam etzadroxil |
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| N.R. |
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| Xeruborbactam(QPX-7728) #,3,$,## |
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| N.R. |
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| ANT-2681 ***,3,$,## |
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* Long standing established β-lactam inhibitors; $ not yet marketed; ** recently developed; *** 3-(sulphonamide)thiazole-4-carboxylic acid non-β-lactam inhibitor; § di-azo-bicyclo-octane non-β-lactam inhibitors; # non-β-lactam inhibitors derived from boronic acid; §§ bicyclo-acyl hydrazide non-β-lactam inhibitor; ## NDM inhibitors; 1 no inhibition of carbapenemases; 2 already marketed only in Japan for paediatric patients (Orapenem®) inhibits class A blaC BLE produced by Mycobacterium tuberculosis; 3 under investigation in preclinical/clinical trials; 4 administered with sulbactam 1/1 in clinical trials; N.R. = not reported.
BLAs/BLEsIs combinations currently marketed in Europe and USA with the most common brand names, the available dosage forms, the suggested clinical uses, and posology.
| Brand Name | Composition § | Dosage Form | Type of Infection | Posology |
|---|---|---|---|---|
| Augmentin® | Amoxacillin/K clavulanate 7/1 | Film Coated Tablets | Diabetic foot | 1 tablet 2/3 a day |
| Amoxacillin/K clavulanate 7/1 | Powder for oral suspension in sachets | 1 sachet 2/3 times a day | ||
| Amoxacillin/K clavulanate 7/1 | Powder for oral suspension in sachets (children) | 25/3.6 mg to 45/6.4 mg/Kg day | ||
| Amoxacillin/K clavulanate 7/1 | Powder for oral suspension in sachets (children) | 25/3.6 mg to 45/6.4 mg/Kg day given in two doses with | ||
| Amoxacillin/K clavulanate 5/1 | Powder for solution for injection/infusion | 1000 mg/200 mg every 8 h | ||
| Powder for solution for injection/infusion | Children ≥ 3 months | |||
| Children < 3 months or < 4 kg 25 mg/5 mg/kg every 12 h | ||||
| Amoxacillin/K clavulanate 10/1 | Powder for solution for infusion | 1000 mg/100 mg every 8/12 h | ||
| Powder for solution for injection/infusion | Children ≥ 3 months50 mg/5 mg/kg every 8 h | |||
| Children < 3 months or < 4 kg 50 mg/5 mg/kg every 12 h | ||||
| Timentin® | (Na)2 Ticarcillin/K clavulanate 30/1 | Injection | Systemic infections, cUTIs | 3.1 g Timentin every 4/6 h |
| gynecologic infections * | Moderate infections | |||
| Severe infections 300 mg/kg/day in divided doses every 4 h. | ||||
| Injection | Aspiration Pneumonia | Mild/moderate infections | ||
| Severe infections | ||||
| Clavucar | (Na)2 Ticarcillin/K clavulanate 5/1 | Intramuscolar Injection (IMI) | Aspiration Pneumonia | 1 bottle (1.2 g) 2–3 times a day. |
| (Na)2 Ticarcillin/K clavulanate 15/1 | Intravenous Infusion (IVI) | 1 bottle (3.2 g) every 8 h | ||
| Zosyn® | Piperacillin/Na tazobactam 8/1 | Frozen iso-osmotic sterile non-pyrogenic premixed solution for IVI | Cellulitis | Adults |
| Piperacillin/Na tazobactam 8/1 | Powder/lyophilized for solution for IVI | Pediatric patients ≥ 9 months | ||
| Pediatric patients 2–9 months 90 mg/Kg Zosyn every 8 h | ||||
| Zerbaxa | Ceftalozane sulfate 1000 g | Powder for concentrate for solution for IVI | HAP, VAP, cIAIs | 1 bottle (1.5 g) every 8 h |
| Unasyn® | Na Ampicillin/Na Sulbactam (2/1)/1.6 mL | Powder and solvent for solution for injection | VAP, HAP, cUTIs, cIAIs | Adults |
| Na Ampicillin/Na Sulbactam (2/1)/3.2 mL | Powder and solvent for solution for IMI | |||
| Na Ampicillin/Na Sulbactam (2/1)/3.2 mL | Powder and solvent for solution for IVI | Children | ||
| Na Ampicillin/Na Sulbactam (2/1) | Powder for solution for IMI | Neonates | ||
| Sultamicillin®,1 | Bounded ampicillin and sulbactam | Tablets | Adults | |
| Children < 30 Kg | ||||
| Sulperazon® | Na cefoperazone/Na Sulbactam 1/1 | Injection | Upper/LRTIs | Adults |
| Children | ||||
| New-borns | ||||
| Recarbrio™ | Imipenem/Na cilastatin/relebactam 2/2/1 | Power for solution IVI | cUTIs, cIAIs, HAP, VAP | 1.25 g Recarbrio every 6 h |
| Avycaz® | Ceftazidime/avibactam 4/1 | Vials for IVI (2.5 g) | cIAIs, HAP, VAP | >18 years old |
| Zavicefta® | Power for solution for IVI (2.5 g) | 3–6 months | ||
| 3 months–2 years old | ||||
| 2–18 years old | ||||
| Vabomere® | Meropenem/vaborbactam 1/1 | Power for solution for IVI (2.0 g) | cUTIs, cIAIs, HAP, VAP | >18 years old |
§ The reported weights refer to the free form or to the anhydrous forms of drugs; LRTIs = lower respiratory tract infections; cUTIs = complicate urinary tract infections; cIAIs = complicated intraabdominal tract infections; VAP = ventilator acquired pneumonia; HAP = hospital acquired pneumonia; Na = sodium; * for patients weighing less than 60 kg, the recommended dosage is 200 to 300 mg/kg/day, based on ticarcillin content, given in divided doses every 4 to 6 h; 1 Chemical name: hydroxymethyl (2S,5R,6R)-6-[®-(2-amino-2-phenylacetamido)]-3,3-dimetyl-7-oxo-4-tia-1-azabicyclo [3.2.0] heptane-2-carboxylate, (2S,5R)-3,3-dimetyl-7-oxo-4-tia-1-azabicyclo [3.2.0] heptane-2-carboxylate (ester), S,S-dioxide (WHO) is a prodrug (ester) of sulbactam and ampicillin.
Scheme 2Biosynthesis of CA (C8H9NO5, MW: 199.16), IUPAC name: (2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo [3.2.0] heptane-2-carboxylic acid.
Scheme 3Synthesis of sulbactam from 6-APA (C8H11NO5S, MW = 233.2), IUPAC name: (2S,5R)-3,3-dimethyl-4,4,7-trioxo-4lambda6-thia-1-azabicyclo [3.2.0] heptane-2-carboxylic acid.
Scheme 4Synthesis of tazobactam from 6-APA (C10H12N4O5S, MW = 300.3), IUPAC name: 3S-methyl-7-oxo-3-(1H-1,2,3-triazol-1-ylmethyl)-4-thia-1-azabicyclo [3.2.0] heptan-2S-carboxylic acid 4,4-dioxide.
Scheme 5Synthesis of tazobactam according to the method proposed by Shuhao et al.
Scheme 6Synthesis of tebipenem pivoxil (C22H31N3O6S2, MW: 497.6), IUPAC name: 2,2-dimethylpropanoyloxymethyl (4R,5S,6S)-3-[1-(4,5-dihydro-1,3-thiazol-2-yl) azetidin-3-yl] sulfanyl-6-[(1R)-1-hydroxyethyl]-4-methyl-7-oxo-1-azabicyclo [3.2.0] hept-2-ene-2-carboxylate.
Scheme 7Synthesis of enmetazobactam, formerly AAI101 (C11H14N4O5S, MW = 314.3), IUPAC name: (2S,3S,5R)-3-methyl-3-[(3-methyltriazol-3-ium-1-yl)-methyl]-4,4,7-trioxo-4λ6-thia-1-azabicyclo [3.2.0] heptane-2-carboxylate.
Scheme 8Synthetic route to prepare 6-methylidene-penem carboxylic acid sodium salts starting from 6-APA.
Scheme 9Synthetic route to prepare LN-1-255 from 6-APA (C22H19N2NaO9S, MW = 510.4), IUPAC name: (2S,3R,5R,6Z)-4-thia-1-azabicyclo [3.2.0] heptane-2-carboxylic acid, 3-[[[(3,4-dihydroxyphenyl) acetyl] oxy] methyl]-3-methyl-7-oxo-6-(2-pyridinylmethylene)-4,4-dioxide, monosodium salt.
Scheme 10Synthesis of avibactam (MF: C7H11N3O6S, MW = 265.25), IUPAC name: [(2S,5R)-2-carbamoyl-7-oxo-1,6-diazabicyclo [3.2.1] octan-6-yl] hydrogen sulphate.
Scheme 11Synthesis of relebactam (C12H20N4O6S, MW = 348.4, IUPAC name: [(2S,5R)-7-oxo-2-(piperidin-4-ylcarbamoyl)-1,6-diazabicyclo [3.2.1] octan-6-yl] hydrogen sulphate.
Scheme 12Synthesis of zidebactam (C13H21N5O7S, MW = 391.4), IUPAC name: [(2S,5R)-7-oxo-2-[[[(3R)-piperidine-3-carbonyl] amino] carbamoyl]-1,6-diazabicyclo [3.2.1] octan-6-yl] hydrogen sulphate.
Scheme 13Synthesis of WCK-4234 (C7H8N3NaO5S, MW = 269.3), IUPAC name: sodium (2S,5R)-2-cyano-7-oxo-1,6-diazabicyclo [3.2.1] octan-6-yl sulfate.
Scheme 14Part A: Synthesis of the ethyl bromo-fluoroacetates I and II used to prepare compounds 10 and ETX-0282 of Part B. Part B: Synthesis of ETX-1317 and of its orally administrable prodrug ETX-0282. ETX-1317 (C10H12FN3O5, MW = 295.2), IUPAC name: (2R)-2-(((2S,5R)-2-carbamoyl-3-methyl-7-oxo-1,6-diazabicyclo [3.2.1] oct-3-en-6-yl)-oxy)-2-fluoroacetic acid. ETX-0282 (C13H18FN3O5, MW = 315.3), IUPAC name: isopropyl (R)-2-(((1R,2R,5R)-2-carbamoyl-4-methyl-7-oxo-1,6-diazabicyclo [3.2.1] oct-3-en-6-yl)-oxy)-2-fluoroacetate.
Scheme 15Synthesis of durlobactam (C8H11N3O6S, MW = 277.36, IUPAC name, [(2S,5R)-2-carbamoyl-3-methyl-7-oxo-1,6-diazabicyclo [3.2.1] oct-3-en-6-yl] hydrogen sulphate.
Scheme 16Synthesis of ANT-3310 (C6H9 FN2O5S, MW = 240.2), IUPAC name, (2R,5R)-2-fluoro-7-oxo-1,6-diazabicyclo [3.2.1] octan-6-yl hydrogen sulphate.
Scheme 17Synthesis of nacubactam (C8H16N4O7S, MW = 324.3), IUPAC name, [(2S,5R)-2-(2-aminoethoxycarbamoyl)-7-oxo-1,6-diazabicyclo [3.2.1] octan-6-yl] hydrogen sulphate.
Scheme 18Synthesis of vaborbactam (formerly RPX-7009) (C12H16BNO5S, MW = 297), IUPAC name, 2-[(3R,6S)-2-hydroxy-3-[(2-thiophen-2-ylacetyl)-amino]-oxaborinan-6-yl]-acetic acid.
Scheme 19Synthesis of taniborbactam (formerly VNRX-5133), (C19H28BN3O5, MW = 389.3), IUPAC name: (3R)-3-[[2-[4-(2-aminoethylamino)-cyclohexyl]-acetyl]-amino]-2-hydroxy-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid.
Scheme 20Synthesis of ({4-[tert-Butoxycarbonyl-(2-tert-butoxycarbonylamino-ethyl)-amino]-cyclohexyl}-acetic acid (I).
Scheme 21Synthesis of VNRX-7145, also known as ledaborbactam etzadroxil, which is the orally bioavailable prodrug of ledarbobactam (VNRX-5236). VNRX-7145 (C19 H26 B N O7, MW 391.2), IUPAC name: 2-hydroxy-3-propionylamino-3,4-dihydro-2H-1-oxa-2-bora-naphthalene-8-carboxylic acid 2-ethyl-butyryloxymethyl ester. VNRX-5236 (C12 H14 B N O5, MW 263.1), IUPAC name: 2-hydroxy-3-propionylamino-3,4-dihydro-2H-1-oxa-2-bora-naphthalene-8-carboxylic acid.
Scheme 22Synthesis of xeruborbactam (formerly QPX7728), (C10H8BFO4, MW = 221.98), IUPAC name: 5-fluoro-2-hydroxy-1,1a,2,7b-tetrahydro-3-oxa-2-bora-cyclopropa[a]naphthalene-4-carboxylic acid.
Scheme 23Synthesis of ANT-2681 ANT-2681 (C12H12F2N8O4S2, MW = 434.4), IUPAC name: 5-((4-(2-Carbamimidoylhydrazine-1-carboxamido)-3,5-difluorophenyl) sulphonamide) thiazole-4-carboxamide.