Literature DB >> 34108660

Generic nature of the condensed states of proteins.

Monika Fuxreiter1,2, Michele Vendruscolo3.   

Abstract

Proteins undergoing liquid-liquid phase separation are being discovered at an increasing rate. Since at the high concentrations present in the cell most proteins would be expected to form a liquid condensed state, this state should be considered to be a fundamental state of proteins along with the native state and the amyloid state. Here we discuss the generic nature of the liquid-like and solid-like condensed states, and describe a wide variety of biological functions conferred by these condensed states.

Year:  2021        PMID: 34108660     DOI: 10.1038/s41556-021-00697-8

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  110 in total

1.  Atomic structures of amyloid cross-beta spines reveal varied steric zippers.

Authors:  Michael R Sawaya; Shilpa Sambashivan; Rebecca Nelson; Magdalena I Ivanova; Stuart A Sievers; Marcin I Apostol; Michael J Thompson; Melinda Balbirnie; Jed J W Wiltzius; Heather T McFarlane; Anders Ø Madsen; Christian Riekel; David Eisenberg
Journal:  Nature       Date:  2007-04-29       Impact factor: 49.962

2.  Life on the edge: a link between gene expression levels and aggregation rates of human proteins.

Authors:  Gian Gaetano Tartaglia; Sebastian Pechmann; Christopher M Dobson; Michele Vendruscolo
Journal:  Trends Biochem Sci       Date:  2007-04-06       Impact factor: 13.807

Review 3.  The wisdom of crowds: regulating cell function through condensed states of living matter.

Authors:  Simon Alberti
Journal:  J Cell Sci       Date:  2017-08-14       Impact factor: 5.285

4.  Simultaneous quantification of protein order and disorder.

Authors:  Pietro Sormanni; Damiano Piovesan; Gabriella T Heller; Massimiliano Bonomi; Predrag Kukic; Carlo Camilloni; Monika Fuxreiter; Zsuzsanna Dosztanyi; Rohit V Pappu; M Madan Babu; Sonia Longhi; Peter Tompa; A Keith Dunker; Vladimir N Uversky; Silvio C E Tosatto; Michele Vendruscolo
Journal:  Nat Chem Biol       Date:  2017-03-22       Impact factor: 15.040

Review 5.  The amyloid state and its association with protein misfolding diseases.

Authors:  Tuomas P J Knowles; Michele Vendruscolo; Christopher M Dobson
Journal:  Nat Rev Mol Cell Biol       Date:  2014-06       Impact factor: 94.444

6.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

7.  Widespread occurrence of the droplet state of proteins in the human proteome.

Authors:  Maarten Hardenberg; Attila Horvath; Viktor Ambrus; Monika Fuxreiter; Michele Vendruscolo
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-14       Impact factor: 11.205

Review 8.  Biomolecular condensates: organizers of cellular biochemistry.

Authors:  Salman F Banani; Hyun O Lee; Anthony A Hyman; Michael K Rosen
Journal:  Nat Rev Mol Cell Biol       Date:  2017-02-22       Impact factor: 94.444

9.  Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins.

Authors:  Yuan Lin; David S W Protter; Michael K Rosen; Roy Parker
Journal:  Mol Cell       Date:  2015-09-24       Impact factor: 17.970

10.  Proteome-wide observation of the phenomenon of life on the edge of solubility.

Authors:  Giulia Vecchi; Pietro Sormanni; Benedetta Mannini; Andrea Vandelli; Gian Gaetano Tartaglia; Christopher M Dobson; F Ulrich Hartl; Michele Vendruscolo
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-31       Impact factor: 11.205

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  20 in total

1.  An intrinsically disordered pathological prion variant Y145Stop converts into self-seeding amyloids via liquid-liquid phase separation.

Authors:  Aishwarya Agarwal; Sandeep K Rai; Anamika Avni; Samrat Mukhopadhyay
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-09       Impact factor: 11.205

Review 2.  Conformational Freedom and Topological Confinement of Proteins in Biomolecular Condensates.

Authors:  Daniel Scholl; Ashok A Deniz
Journal:  J Mol Biol       Date:  2021-11-09       Impact factor: 5.469

3.  The relative binding position of Nck and Grb2 adaptors impacts actin-based motility of Vaccinia virus.

Authors:  Angika Basant; Michael Way
Journal:  Elife       Date:  2022-07-07       Impact factor: 8.713

Review 4.  Telomere Length Regulation.

Authors:  Peter Lansdorp
Journal:  Front Oncol       Date:  2022-07-04       Impact factor: 5.738

Review 5.  Dynamic protein structures in normal function and pathologic misfolding in systemic amyloidosis.

Authors:  Emily Lewkowicz; Olga Gursky
Journal:  Biophys Chem       Date:  2021-10-14       Impact factor: 3.628

Review 6.  Merging Established Mechanisms with New Insights: Condensates, Hubs, and the Regulation of RNA Polymerase II Transcription.

Authors:  Megan Palacio; Dylan J Taatjes
Journal:  J Mol Biol       Date:  2021-08-30       Impact factor: 5.469

7.  FuzDB: a new phase in understanding fuzzy interactions.

Authors:  Andras Hatos; Alexander Miguel Monzon; Silvio C E Tosatto; Damiano Piovesan; Monika Fuxreiter
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

Review 8.  Nuclear Protein Condensates and Their Properties in Regulation of Gene Expression.

Authors:  Wei Li; Hao Jiang
Journal:  J Mol Biol       Date:  2021-07-14       Impact factor: 6.151

9.  Molecular Determinants of Selectivity in Disordered Complexes May Shed Light on Specificity in Protein Condensates.

Authors:  Alexander Miguel Monzon; Damiano Piovesan; Monika Fuxreiter
Journal:  Biomolecules       Date:  2022-01-06

10.  Experimental Evidence of Intrinsic Disorder and Amyloid Formation by the Henipavirus W Proteins.

Authors:  Giulia Pesce; Frank Gondelaud; Denis Ptchelkine; Juliet F Nilsson; Christophe Bignon; Jérémy Cartalas; Patrick Fourquet; Sonia Longhi
Journal:  Int J Mol Sci       Date:  2022-01-15       Impact factor: 5.923

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