Literature DB >> 28808090

The wisdom of crowds: regulating cell function through condensed states of living matter.

Simon Alberti1.   

Abstract

Our understanding of cells has progressed rapidly in recent years, mainly because of technological advances. Modern technology now allows us to observe molecular processes in living cells with high spatial and temporal resolution. At the same time, we are beginning to compile the molecular parts list of cells. However, how all these parts work together to yield complex cellular behavior is still unclear. In addition, the established paradigm of molecular biology, which sees proteins as well-folded enzymes that undergo specific lock-and-key type interactions, is increasingly being challenged. In fact, it is now becoming clear that many proteins do not fold into three-dimensional structures and additionally show highly promiscuous binding behavior. Furthermore, proteins function in collectives and form condensed phases with different material properties, such as liquids, gels, glasses or filaments. Here, I examine emerging evidence that the formation of macromolecular condensates is a fundamental principle in cell biology. I further discuss how different condensed states of living matter regulate cellular functions and decision-making and ensure adaptive behavior and survival in times of cellular crisis.
© 2017. Published by The Company of Biologists Ltd.

Keywords:  Intracellular organization; Membrane-less compartment; Phase separation

Mesh:

Substances:

Year:  2017        PMID: 28808090     DOI: 10.1242/jcs.200295

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  67 in total

1.  Determination of Aqueous Two-Phase System Binodals and Tie-Lines by Electrowetting-on-Dielectric Droplet Manipulation.

Authors:  Taisuke Kojima; Chu-Chi Lin; Shuichi Takayama; Shih-Kang Fan
Journal:  Chembiochem       Date:  2018-12-13       Impact factor: 3.164

2.  Role of G-proteins and phosphorylation in the distribution of AGS3 to cell puncta.

Authors:  Ali Vural; Ersin Fadillioglu; Fatih Kelesoglu; Dzwokai Ma; Stephen M Lanier
Journal:  J Cell Sci       Date:  2018-12-05       Impact factor: 5.285

3.  Bacterial FtsZ protein forms phase-separated condensates with its nucleoid-associated inhibitor SlmA.

Authors:  Begoña Monterroso; Silvia Zorrilla; Marta Sobrinos-Sanguino; Miguel A Robles-Ramos; Marina López-Álvarez; William Margolin; Christine D Keating; Germán Rivas
Journal:  EMBO Rep       Date:  2018-12-06       Impact factor: 8.807

Review 4.  Generic nature of the condensed states of proteins.

Authors:  Monika Fuxreiter; Michele Vendruscolo
Journal:  Nat Cell Biol       Date:  2021-06-09       Impact factor: 28.824

Review 5.  Phase Separation in Germ Cells and Development.

Authors:  Anne E Dodson; Scott Kennedy
Journal:  Dev Cell       Date:  2020-10-01       Impact factor: 12.270

6.  Human Antiviral Protein MxA Forms Novel Metastable Membraneless Cytoplasmic Condensates Exhibiting Rapid Reversible Tonicity-Driven Phase Transitions.

Authors:  Deodate Davis; Huijuan Yuan; Feng-Xia Liang; Yang-Ming Yang; Jenna Westley; Chris Petzold; Kristen Dancel-Manning; Yan Deng; Joseph Sall; Pravin B Sehgal
Journal:  J Virol       Date:  2019-10-29       Impact factor: 5.103

Review 7.  RNA phase separation-mediated direction of molecular trafficking under conditions of molecular crowding.

Authors:  Kazuki Kohata; Daisuke Miyoshi
Journal:  Biophys Rev       Date:  2020-05-16

8.  A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes.

Authors:  Yi-Hsuan Lin; Jacob P Brady; Hue Sun Chan; Kingshuk Ghosh
Journal:  J Chem Phys       Date:  2020-01-31       Impact factor: 3.488

9.  Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains.

Authors:  Ann Boija; Isaac A Klein; Benjamin R Sabari; Alessandra Dall'Agnese; Eliot L Coffey; Alicia V Zamudio; Charles H Li; Krishna Shrinivas; John C Manteiga; Nancy M Hannett; Brian J Abraham; Lena K Afeyan; Yang E Guo; Jenna K Rimel; Charli B Fant; Jurian Schuijers; Tong Ihn Lee; Dylan J Taatjes; Richard A Young
Journal:  Cell       Date:  2018-11-15       Impact factor: 41.582

Review 10.  More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change.

Authors:  Anupam K Chakravarty; Daniel F Jarosz
Journal:  J Mol Biol       Date:  2018-07-19       Impact factor: 5.469

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