| Literature DB >> 33256085 |
Bakr Ahmed Taha1, Yousif Al Mashhadany2, Mohd Hadri Hafiz Mokhtar1, Mohd Saiful Dzulkefly Bin Zan1, Norhana Arsad1.
Abstract
Timely detectioene">n aene">nd diagene">nosis are esseene">ntially needed to guide outbreakEntities:
Keywords: COVID-19 detection; COVID-19 transmission styles; artificial intelligence; biosensor application; sensors interaction
Mesh:
Year: 2020 PMID: 33256085 PMCID: PMC7729752 DOI: 10.3390/s20236764
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Taxonomy information of 2019-nCoV, β coronavirus (A). Environmental sample of 2019-nCoV, β coronavirus on 22 January 2020 at Wuhan, Hubei Province, China, (B). Clinical patient sample of 2019-nCoV, β coronavirus on 6 January 2020 at Wuhan, Hubei Province, China. Source: National Pathogen Resource Collection Center (National Institute for Viral Disease Control and Prevention under Chinese Center for Disease Control and Prevention). URL: http://nmdc.cn/nCov/en.
Figure 2Taxonomy of literature research on coronavirus disease (COVID-19).
Figure 3Transmission concepts for the COVID-19 virus from environment to human.
Figure 4Transmission concepts for COVID-19 virus from human exchange.
Figure 5Transmission concepts for COVID-19 virus from animals to human.
Analysis of category styles of transmission coronavirus.
| Transmission Style | Hazard | Places | Data Published | Country | Finding | Reference |
|---|---|---|---|---|---|---|
| Environment to human | High | Plastic, stainless steel, copper and cardboard | 17 March 2020 | USA | SARS-CoV-2 | [ |
| Environment to human | High | Hospital rooms | 29 May 2020 | Singapore | SARS-CoV-2 | [ |
| Environment to human | High | Air and surface | 26 June 2020 | Italy | SARS-CoV-2 | [ |
| Environment to human | High | Surface contamination | 2016 | London | SARS-CoV and MERS-CoV | [ |
| Environment to human | High | Air, surface | 7 May 2020 | China | COVID-19 | [ |
| Environment to human | High | Water | 28 April 2020 | Italy | SARS-CoV-2 | [ |
| Environment to human | High | Toilet | 13 August 2020 | China | SARS-CoV-2 | [ |
| Human exchange | High | Contacts | 24 January 2020 | China | SARS-CoV-2 | [ |
| Human exchange | High | Ocular surface | 22 April 2020 | Australia | SARS-CoV-2 | [ |
| Human exchange | High | Dental clinics | 19 February 2020 | China | SARS-CoV-2 | [ |
| Animal to human | Medium | Bats | 2020 | USA | SARS-CoV-2 | [ |
| Animal to human | Medium | Sold avian, swine, porcine, bovine, canine, seafood, frogs, camels | 2020 | China | SARS-CoV-2 | [ |
| Human to others | Low | Wastewater surveillance | 18 April 2020 | Australia | SARS-CoV-2 | [ |
Figure 6Categories of hypothesized SARS-CoV-2 virus origin and a common path of outbreak zoonotic coronavirus transmission.
Analysis of the diagnosis of COVID-19 based on artificial intelligence techniques.
| Type of Dataset | AI Techniques | Case Study | Efficiency of Detection (%) | Installation Data | Collection Dataset Size | AI Partition | No. of Classes | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Prime Data | Minor Data | Traditional Machine Learning Techniques | Deep Learning Techniques | ||||||||
| Test | Validation | Training | |||||||||
| ✕ | ✕ | ✕ | ✓ | CT scan | 96% | 19 February 2020 | 2 images | ✕ | ✕ | 13.3% | COVID-19, Flu |
| ✓ | ✕ | ✓ | ✕ | CT scan | 93.6% | 2020 | 13,500 images | ✕ | ✕ | ✕ | COVID-19 |
| ✓ | ✓ | ✓ | ✓ | CT scan | 50% | 2020 | NA | ✓ | ✕ | ✕ | COVID-19 |
| ✓ | ✓ | ✓ | ✓ | CT scan | NA | 20 February 2020 | NA | ✕ | ✕ | ✕ | COVID-19 |
| ✕ | ✓ | ✕ | ✓ | X-ray | 87.02%, 98.08% | 26 April 2020 | 127 images | ✕ | 5-fold cross | ✕ | COVID-19, no finding and pneumonia |
| ✕ | ✓ | ✕ | ✓ | X-ray | 98.03% | 21 April 2020 | 2839 images | 10% | 10% | 80% | COVID-19, normal, pneumonia |
| ✕ | ✓ | ✕ | ✓ | X-ray | 86.9% | 16 June 2020 | 430 images | 0.7 | 0.1 | 0.2 | Normal, bacterial tuberculosis, viral and COVID-19 |
| ✕ | ✓ | ✓ | ✕ | X-ray | 80% | 2020 | 8 images | ✕ | two-fold | ✕ | COVID-19 |
| ✕ | ✓ | ✓ | ✓ | X-ray | 99.27% | 2 May 2020 | 845 images | 30% | 5-fold cross | 70% | coronavirus, pneumonia and normal |
| ✓ | ✓ | ✓ | ✓ | X-ray | 87%, 98% | 2020 | 1144 images | 30% | ✕ | 70% | Normal, COVID-19, MERS SARS, Varicella, Streptococcus Pneumocystis |
Figure 7A schematic diagram of the collecting and extraction sample steps to detect COVID-19 based on biosensor applications.
Deep analysis for the detection of COVID-19 based biosensors.
| Sensor Type | Application Range | Material (nm) | Prognosis | Diagnosis | Installation Date | Target | Duration | Detection Limit | Sample Size | Detection of COVID-19 Virus | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| In Clinical | On the Surface | ||||||||||
| Optical LSPR | SARS-CoV-2 | Gold | ✓ | ✓ | 8 Apr 220 | DNA | 800 s | 0.22 pM | 0.01 pM–50 Μm | ✓ | ✕ |
| FET sensor | SARS-CoV-2 | Graphene | ✓ | ✓ | 29 May 2020 | Spike protein | 4 h | 1.6 × 101 pfu/mL | 1 fg/mL | ✓ | ✕ |
| Magnetic | SARS-CoV | NA | ✓ | ✓ | 3 July 2020 | Anti-spike protein | 42 min | 2.96 ng/mL | 2 ng mL−1 | ✓ | ✕ |
| P-FABU-bent optical fiber | COVID-19 | Gold | ✓ | ✓ | 1 June 2020 | N-protein | 15 min | 10–18 M | 106 particles/mL | ✓ | ✕ |
| Electrochemical | SARS-CoV-2 | Gold | ✓ | ✓ | 11 M ay 2020 | Spike protein | 10–30 s | 90 fM | 1 μM | ✓ | ✕ |
| Electrochemical | MERS-CoV | Gold | ✓ | ✓ | 27 Feb 2019 | Spike protein | 20 min | 1.0 pg mL−1 | 10 μg mL−1 | ✓ | ✕ |
| Optical Fiber | COVID-19 | Gold | ✕ | ✓ | 11 June 2020 | IgG-type antibodies | 1 h | 100 units/mL | NA | ✓ | ✕ |
| Piezoelectric | SARS-CoV | Crystal with quartz wafer | ✕ | ✓ | 2004 | Antigen (sputum) | 1 h | 0.6 µg/mL | 0.6–4 µg/mL | ✓ | ✕ |
| Optical LSPCF | SARS-COV | Gold | ✓ | ✓ | 2009 | Nucleocapsid protein | 3 h | 1 pg/mL | ∼1 pg/mL | ✓ | ✕ |
| Optical | SARS-CoV | Quantum dots | ✓ | ✓ | 24 July 2011 | Nucleocapsid protein | 1 h | 0.1 pg/mL | 0.1 pg mL−1 | ✓ | ✕ |
| Nanocrystals optical | Coronavirus | Zirconium quantum dots | ✕ | ✓ | 29 Oct 2018 | Antibodies | 1 h | 79.15 EID/50 mL | 1000 EID/50 mL | ✓ | ✕ |
| LFA | SARS-CoV-2 | Gold | ✕ | ✓ | 21 May 2020 | IgM antibody | 15 min | NA | 10−20 μL | ✓ | ✕ |
Figure 8Proposal framework for monitoring and the detection of coronavirus disease (COVID-19) for environmental and telehealth applications.
Categories of challenges for the detection of COVID-19 techniques.
| Challenges, Detection of COVID-19 Virus Techniques According to Critical Review Research | ||
|---|---|---|
| Virus Detection Categories | Techniques | Limitation |
| Indirect detection: DNA, RNA | Electronic sensors |
Signal transduction process found is not always apparent. Heterogeneous interface structures. Long time result. |
| Indirect detection: DNA, RNA | Magnetic sensors |
These require several washing steps, and a well-trained technician is necessary. Sensitivity medium and time-consuming. |
| Indirect detection: Spike protein | Electrochemical sensors |
Immobilization method of the concerned nanomaterial to minimize the chance of error. Needs a long time. |
| Indirect detection: IgM antibody, DNA, RNA | Optical sensors: LSPR, P-FAB, EWA, QCM, SPR and LSPCF |
Requirement for point of care remains difficult. High cost. |
| Direct detection: CT image | CT scan |
The opacity of ground-glasses. Irregular linear patterns in the scan. Lacking in a sample dataset. |
| Direct detection: X-ray image | CXR |
Abnormalities of the radiograph. Foggy opacity. A sensitivity of 59%. Lacking in a sample dataset. |
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Long time result; can take 4 h to 3 days. Errors in sampling. Sample preparation, isolation, washing and analysis. | |
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Low concentration and homogeneous protein. Lacking sensitivity. | |