Giorgia Giovannini1, Hossam Haick2, Denis Garoli3,4. 1. Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, Lerchenfeldstrasse 5, CH-9014, St. Gallen, Switzerland. 2. Department of Chemical Engineering, Biomedical Engineering & The Russell Berrie Nanotechnology Institute (RBNI) Technion - Israel Institute of Technology, Haifa 32000003, Israel. 3. Istituto Italiano di Tecnologia, via Morego 30, I-16163, Genova, Italy. 4. Faculty of Science and Technology, Free University of Bozen, Piazza Università 5, 39100 Bolzano, Italy.
Abstract
Coronavirus disease 2019 (COVID-19) is probably the most commonly heard word of the last 12 months. The outbreak of this virus (SARS-CoV-2) is strongly compromising worldwide healthcare systems, social behavior, and everyone's lives. The early diagnosis of COVID-19 and isolation of positive cases has proven to be fundamental in containing the spread of the infection. Even though the polymerase chain reaction (PCR) based methods remain the gold standard for SARS-CoV-2 detection, the urgent demand for rapid and wide-scale diagnosis precipitated the development of alternative diagnostic approaches. The millions of tests performed every day worldwide are still insufficient to achieve the desired goal, that of screening the population during daily life. Probably the most appealing approach to consistently monitor COVID-19 spread is the direct detection of SARS-CoV-2 from exhaled breath. For instance, the challenging incorporation of reliable, highly sensitive, and cost-efficient detection methods in masks could represent a breakthrough in the development of portable and noninvasive point-of-care diagnosis for COVID-19. In this perspective paper, we discuss the critical technical aspects related to the application of breath analysis in the diagnosis of viral infection. We believe that, if achieved, it could represent a game-changer in containing the pandemic spread.
Coronavirus disease 2019 (COVID-19) is probably the most commonly heard word of the last 12 months. The outbreak of this virus (SARS-CoV-2) is strongly compromising worldwide healthcare systems, social behavior, and everyone's lives. The early diagnosis of COVID-19 and isolation of positive cases has proven to be fundamental in containing the spread of the infection. Even though the polymerase chain reaction (PCR) based methods remain the gold standard for SARS-CoV-2 detection, the urgent demand for rapid and wide-scale diagnosis precipitated the development of alternative diagnostic approaches. The millions of tests performed every day worldwide are still insufficient to achieve the desired goal, that of screening the population during daily life. Probably the most appealing approach to consistently monitor COVID-19 spread is the direct detection of SARS-CoV-2 from exhaled breath. For instance, the challenging incorporation of reliable, highly sensitive, and cost-efficient detection methods in masks could represent a breakthrough in the development of portable and noninvasive point-of-care diagnosis for COVID-19. In this perspective paper, we discuss the critical technical aspects related to the application of breath analysis in the diagnosis of viral infection. We believe that, if achieved, it could represent a game-changer in containing the pandemic spread.
The last year has been critical
for the whole world. The unexpected COVID-19 pandemic completely changed
daily life of most of the population. Every day we talk about the
number of confirmed cases, deaths, and hospitalizations, and discussions
are constantly being held on how to improve the testing efficiency
for COVID-19, to better understand and contain the disease spread.The standard methods to test for COVID-19 rely on polymerase chain
reaction (PCR) technologies. PCR is well-known to ensure high accuracy
and high specificity (e.g., low levels of false positives and negatives).
Yet, the efficiency of this approach is hindered by the slow delivery
of the results, mostly 1 or 2 days after sampling. Rapid tests, typically
based on lateral flow assays or ELISA technologies, therefore are
routinely used as prescreening methods. The results of these tests
are available in 10–30 min, and their sensitivity is up to
90%.[1] Both detection techniques—rapid
antigenic tests and sensitive molecular tests—have limitations
in terms of testing procedures. The first is that they require trained
personnel and properly equipped test sites, something that involves
challenges with the operational logistics and product supply chains
for the enormous number of tests per day in every country. The second
is that the analysis is of nasopharyngeal and oropharyngeal specimens.
This procedure is unpleasant for the patient, misses a standard sampling,
and could miss areas with high viral loads during the swabbing, something
that could lead to false-negative test results.As discussed
below, several other methods and devices have been
proposed or are now under investigation. However, the majority of
them are being assessed using materials extracted from blood, nasal
or oral swabs, sputum, and, more recently, feces (interestingly, urine
cannot be used because it is rare to find SARS-CoV-2 virus in it).[2−4] It is now well-known that the two major ways of COVID-19 spread
are airborne and contact infections/diffusion.[5,6] This
seems to be due to the high resistance of the virus once in aerosol
droplets expelled from infectedpersons (Figure ).
Figure 1
Transmission of COVID-19. Human atomization
of viruses arises from
coughing or sneezing of an infected person, producing virus-containing
droplets (>5 μm) and aerosols (<5 μm). Virus transmission
from person to person occurs through direct/indirect contact and airborne
aerosol/droplet routes. Large droplets mainly settle out of the air
to cause person/object contamination, whereas aerosols efficiently
disperse in air. Direct and airborne transmissions occur in short-range
and extended distance/time, respectively. Inhaled airborne viruses
are deposited directly on to the human respiration tract. Figure adapted
with permission from ref (6), 2020, editor of the National Academy of Sciences.
Transmission of COVID-19. Human atomization
of viruses arises from
coughing or sneezing of an infected person, producing virus-containing
droplets (>5 μm) and aerosols (<5 μm). Virus transmission
from person to person occurs through direct/indirect contact and airborne
aerosol/droplet routes. Large droplets mainly settle out of the air
to cause person/object contamination, whereas aerosols efficiently
disperse in air. Direct and airborne transmissions occur in short-range
and extended distance/time, respectively. Inhaled airborne viruses
are deposited directly on to the human respiration tract. Figure adapted
with permission from ref (6), 2020, editor of the National Academy of Sciences.Several investigations and strategies to mitigate
infection have
been proposed, in particular, ones related to social distance and
the fundamental use of face masks.[7,8] Among the others,
Cowling et al.[8] reported on the detection
of SARS-CoV-2 virus directly from exhaled breath and coughs in patients
with acute respiratory illness. The study was intended to demonstrate
the efficacy of face masks in preventing virus diffusion, but at the
same time, it suggested the plausibility of direct detection of COVID-19
from breath. This approach is now attracting significant interest
to other viral diagnostics.[9] Several reviews
have been published on breath analysis.[10−13] In this Perspective, we will
focus on breath analysis for COVID-19 diagnostics. As discussed below,
to date it has been possible to demonstrate the direct detection of
COVID-19 virus from exhaled breath only by using specific devices
that can collect and condense exhaled breath for several minutes,
and by using this condensate to extract the virus and follow the standard
PCR based routine. Amplification-free detection has yet to be demonstrated.
Moreover, it has been extensively demonstrated that the virus induces
the cells to produce metabolites, which leads to volatile organic
compounds (VOCs) being exhaled. These VOCs can be targets of breath
diagnostics and used to assess health status without being invasive
for patients. Recent reports have been on viral-associated breath
VOCs for both rhinovirus[14] and seasonal
influenzarespiratory tract infections.[15] More recently, they have also tentatively linked specific breath
VOCs with SARS-CoV-2 infections.[9,16,17] These pioneer studies suggest a clear correlation between specific
VOCs and COVID-19infection. The procedures used to collect exhaled
breath and the low reproducibility of the results show that a lot
of work is still needed to make exhaled breath analysis a robust method
of detection. In this perspective paper, we discuss how exhaled breath
analyses could be a potential game-changer for the prescreening of
virus infection, in particular, for the current COVID-19 pandemic.
We will discuss the issues related to COVID-19 detection and sensing,
and try to correlate the recent findings on COVID-19 diffusion mechanisms
considering the great challenge of directly detecting SARS-CoV-2 from
the air and exhaled aerosols and breath.
State-of-the-Art in Sensing
COVID
The abundance of publications associated with the SARS-CoV-2
outbreak
is indicative of the intense effort by research institutes and pharmaceutical
industries to gain knowledge about this newly identified virus, as
well as to develop vaccines, therapeutics, and diagnostics. So far,
massive-scale testing has been the main strategy adopted for the containment
of the COVID-19 pandemic, but the analytical laboratories have been
overloaded with requests and the test supply was insufficient.[18−20] To maximize test availability, the US FDA has approved diagnostic
tools with a simplified procedure granted by the Emergency Use Authorization
(EUA). Many authors have extensively reviewed the commercialized devices
highlighting their sensitivity and time required for the results.[21,22] A massive number of methods are available in the literature proposing
novel approaches to develop rapid, highly sensitive, cost-efficient,
and easy-to-use point-of-care devices for COVID-19 diagnosis.Molecular tests used for confirming COVID-19 are considered to
be the gold standard for SARS-CoV-2 testing, whereas serological tests
are used for antibody detection. The three main detection methods
are (i) identification of the viral gene region through nucleic acid
amplification techniques (PCR), gene sequencing,[23] and CRISPR-based nucleic acid detection;[24] (ii) recognition of antibodies (IgM and IgG) produced to
the viral infection (serological tests); and (iii) detection of specific
SARS-CoV-2 antigens (i.e., spike, envelope, and nucleotide proteins).
Each of these methods has pros and cons that have been critically
reviewed.[25,26] For instance, identification approaches
of RNA/DNA require sophisticated devices and trained personnel. These
protocols increase the occurrence of human errors during sample handling
and analysis. Moreover, the results are available after only a relatively
long time (4 h to 3 days). The identification of antibodies or viral
antigens is robust, mainly because they rely on simpler technologies,
but the low concentration of the targeted analyte in the sample decreases
the sensitivity of the methods.[27] Several
approved diagnostics are based on colorimetric lateral flow assay
(LFA), where the targeted analyte is detected using antibodies immobilized
on a membrane. The advantage of LFA, compared to ELISA tests, is the
possibility of using it at home without the need for personalized
training, similar to the well-known pregnancy test, and the relatively
low cost of the diagnostic. This is controversial for COVID-19 because
typically used biological samples are extracted from nasal or oral
swabs that must be collected by trained personnel to ensure the reproducibility
of the test and guarantee a standardized collection procedure.[28,29] In general, the sensitivity and specificity of PCR and LFA are high,
but poorer performance is achieved when the viral load is too low
to be detected (Figure ), viz., when COVID-19 is still in its early stages. Even though
the common testing procedures still require direct contact with the
patient and trained staff for specimen collection, steps forward to
ideal self-sampling and self-testing have recently been made. In the
US and more recently in Europe, some home-tests have been authorized
by the FDA under EUA. EmpowerDX and LabCorp are at-home COVID-19 RT-PCR
tests containing a kit for the collection of the shallow, pain-free
nasal sample that is then shipped back to the laboratory, and the
results are available on the online portal between 24 and 48 h. In
Germany and Spain, EmpowerDX PCT tests based on saliva or gargle samples
are currently available. Ellume Limited is launching the first rapid
COVID-19 at-home self-test on the US pharmaceutical market. The kit
contains a nasal swab, and the diagnostic that analyzes the sample
transmits the result automatically to the user’s smartphone
via Bluetooth.
Figure 2
High-frequency testing with low analytic sensitivity versus
low-frequency
testing with high analytic sensitivity. A person’s infection
trajectory (blue line) is shown in the context of two surveillance
regimens (circles) with different analytic sensitivity. Higher frequency
testing is more likely to test in the infectious window. Therefore,
although both testing regimens detect the infection (orange circles),
the high-frequency lateral flow test is more likely to detect it during
the transmission window (shading), despite its lower analytic sensitivity.
The figure is not an accurate representation of exactly when a positive
test is likely to signify that a case is infectious. Adapted with
permission from ref (1). BMJ Publishing Group.
High-frequency testing with low analytic sensitivity versus
low-frequency
testing with high analytic sensitivity. A person’s infection
trajectory (blue line) is shown in the context of two surveillance
regimens (circles) with different analytic sensitivity. Higher frequency
testing is more likely to test in the infectious window. Therefore,
although both testing regimens detect the infection (orange circles),
the high-frequency lateral flow test is more likely to detect it during
the transmission window (shading), despite its lower analytic sensitivity.
The figure is not an accurate representation of exactly when a positive
test is likely to signify that a case is infectious. Adapted with
permission from ref (1). BMJ Publishing Group.Anyway, as the demand
for testing is constantly increasing, more
burden on the laboratories prolongs to time to the test result. The
lack of universal standardization increases this burden, as it requires
each country to define its own policy. This influences the actual
discovery rates of positive cases in the population, and threatens
the path forward to gain control of the disease. For these reasons,
healthcare systems worldwide require tests that are noninvasive, rapid,
inexpensive, and easy-to-use tools for prescreening or ruling out
infection at earlier stages, even before symptoms of COVID-19 manifest,
before the well-accepted molecular confirmatory tests to decrease
the virus spread and the mortality rates.Nanotechnology has
been used to develop biosensors for detecting
SARS-CoV-2, as well as to improve RNA sequencing and make PCR technology
affordable, easy to use, and portable.[30−33] New strategies have been deeply
revisited by other authors,[2,31,32,34] and the detection accuracy of
the methods available in the literature has been analyzed by meta-analysis.[33]Table summarizes the pros and cons of the three more recurring
techniques used in designing novel SARS-CoV-2 detection methods, exploiting
the advantages of nanotechnology (i.e., magnetic, electrochemical,
and optical methods), noting some examples. So far, the majority of
these detection techniques can be used with samples from the respiratory
tract, sputum and fecal specimens, with the exception of serological
tests which require blood samples. Among all of them, nasopharyngeal
and oropharyngeal swabs give the gold standard specimen for the diagnosis
of SARS-CoV-2 due to the high viral load in the upper respiratory
tract after onset of symptoms.[35] Sputum
(saliva), on the other hand, contains SARS-CoV-2 and therefore represents
a valuable alternative for the diagnosis of COVID-19.[36] The sensitivity and limit of detection (LOD) of COVID-19
diagnostics are determined by the infectious dose (= number of virus
particles that are sufficient to infect 50% of a given population,
the ID50) and the minimum viral load (= number of virus particles
in an infected individual). Unfortunately, as of now, lack of knowledge
on the infectious dose of SARS-CoV-2, as well as the variability of
the viral load, make the comparison between the different diagnostic
methods difficult. Current “best-in-class” diagnostic
tests have detection limits of ∼100 copies/mL.[20] However, due to the lack of standard protocols for sample
collection and the possibility of personal errors, several studies
reported low reproducibility and accuracy of tests.[37]
Table 1
Summary of Advantages/Limitation of
Three Nanotechnology-Based Detection Approaches Commonly Used in Designing
Novel COVID-19 Diagnostics
techniques
advantages
limitations
examples
Magnetic sensors[38]
Simple analyte isolation
Sample preparation
RNA extraction with magnetic
beads[39]
Improved signal/noise ratio
Time-consuming
Magnetic isolation and fluorescent
detection[40]
Electrochemical
sensors[41]
High sensitivity
Short self-life and limited
stability over time
Magnetic isolation to improve
electrochemical immunosensors[42]
Rapid detection (between
20 to 45 min)[42,43]
Interferences
to the signal
Fast
SARS-CoV-2 detection
using functionalized graphene electrodes[43]
Fluorescent-based nanoPCR
using dual-functional magneto-plasmonic nanoparticles method[46]
Rapid detection
(between 10 and 20 min)[45]
Colorimetric and fluorescence
signal LFA for semiquantitative and quantitative detection by smartphone-based
device.[47]
Label-free detection of
SARS-CoV-2 using gold-nanoplasmonic sensor.[48]
Airborne Transmission
of SARS-CoV-2
It is generally considered that viral respiratory
infections spread
by person-to-person transmission, and contact with contaminated surfaces
is among the main routes to spread COVID-19 (Figure A).[49−51] However, the high transmission
rate of SARS-CoV-2 suggested that direct contact is not the only way
of viral spreading, and virus-containing exhaled droplets have a fundamental
role in the fast spread of infection.[52−55] Some studies have confirmed the
airborne transmission of COVID-19 through saliva droplets,[35,56] whereas others have established dynamic flow models of airborne
particles containing SARS-CoV-2 trying to elucidate the contexts in
which COVID-19 airborne transmission mainly occurs.[57,58] Two factors are considered in evaluating the airborne transmission:
(i) the viral load in saliva and mucosae droplets, and (ii) the survival
rate of the SARS-CoV-2 in the environment. It has been proven that
the viral load can vary depending on the specimen being considered.
SARS-CoV-2 is currently isolated from respiratory samples such as
sputum and nasal and throat swabs/washes, with typical viral load
ranging from 641 to 1.34 × 1011 copies/mL, with a
median of 7.99 × 104 copies/mL in throat samples,
105 copies/mL in sputum, and 1.69 × 105 copies/mL in nasal samples.[59,60] Sneezing and coughing
large drops of saliva and small drops from mucosae into the environment
constitutes a high risk of infection. This risk is related to the
viral load in the single drop (in turn relative to the droplet size)
as well as to the number of droplets and their diffusion in the environment.
It has been observed that more drops are released than while breathing
normally, but the drops are the same size.[61,62] The airborne transmission of COVID-19 can occur by inhalation of
microscopic aerosol particles consisting of evaporated respiratory
droplets, which are small enough to remain airborne for hours (<5
mm).[63] Indeed, when infected individuals
cough or sneeze, droplets containing SARS-CoV-2 are released. The
larger droplets (>5–10 μm) fall on nearby surfaces,
whereas
the small ones (on the order of 1 μm) can remain airborne as
aerosol and are breathed in by other people (environment-to-person
transmission), as illustrated in Figure B.[61,64] The airborne transmission
route has been evaluated by means of theoretical models[64] and studies of physic dynamics,[61,62,65] while experimental evaluations
are limited by the low viral load (<1 gene copies/m3).[50] Other studies stated that a typical
sneeze and cough could contain 40,000 and 3,000 droplets, respectively,
leading to the spread of 10,000 to 2 × 108 virosomes,
depending on the viral load of the carrier.[66,67] Doremalen et al. showed that the infectious titer (TCID50) in aerosols
(<5 μm) containing SARS-CoV-2 reduced from 105.25 per mL to 102.7 TCID50 per liter of air after 3 h of
experiment, which is too low to be detected with any sensor.[68] As introduced previously, another important
factor for airborne transmission is the survival rate of the virus
in the environment. Dynamic modelings, supported by lab results, have
indicated that the rapid spread of SARS-CoV-2 is favored by its long
resistance in the air.[52,57,69] Goh et al. used empirically based molecular tools to calculate the
intrinsic disorder for SARS-CoV-2. The results confirmed its high
resilience in saliva, and proved its ability to remain active for
long periods outside the body, even in hostile environmental conditions.[70] Arguably, this peculiarity is responsible for
the high level of contagion, since the harder shell protects the virion
from inactivation.[71]
Figure 3
(A) Scheme of different
possible transmission routes of SARS-CoV-2
through expiration (i.e., breathing, coughing, sneezing). Besides
the close range and airborne transmission, virus-containing droplets
can settle on surfaces (fomites, leading to self-inoculation). (Reproduced
with permission from ref (78), Springer Nature). (B) Air diffusion of large and small
virus-containing droplets. (Reproduced with permission from ref (57), Elsevier Ltd.) (C) Box-whisker
chart of log10 of aerosol droplet volume (pL = picoliters). Box –
median values; whisker – minimum and maximum values. The volume
is considered as pL/20 min of breathing and speaking, and as pL per
cough and sneeze (Reproduced with permission from ref (76)).
(A) Scheme of different
possible transmission routes of SARS-CoV-2
through expiration (i.e., breathing, coughing, sneezing). Besides
the close range and airborne transmission, virus-containing droplets
can settle on surfaces (fomites, leading to self-inoculation). (Reproduced
with permission from ref (78), Springer Nature). (B) Air diffusion of large and small
virus-containing droplets. (Reproduced with permission from ref (57), Elsevier Ltd.) (C) Box-whisker
chart of log10 of aerosol droplet volume (pL = picoliters). Box –
median values; whisker – minimum and maximum values. The volume
is considered as pL/20 min of breathing and speaking, and as pL per
cough and sneeze (Reproduced with permission from ref (76)).To summarize, the high survival rate of SARS-CoV-2 and its airborne
contamination can explain its high transmission rate, and yet this
raises other questions. Considering that asymptomatic and presymptomatic
individuals do not cough or sneeze to any appreciable extent, how
are they contagious, and how do they generate aerosols? To answer
these questions, we refer to the findings of Yan et al.[72] who have shown that sneezing and coughing are
not required for influenza virus aerosolization. Visualization by
simple laser methods[73] shows that the droplets
produced while speaking are 20–500 μm in diameter and
smaller while breathing—something that does not settle easily
but diffuses through the air and is particularly dangerous in COVID-19
transmission.[74] This conclusion has been
supported by studies showing that wearing masks and respecting social
distancing limit COVID-19 spread, in both asymptomatic and infected
individuals.[75] On the other hand, Schijven
et al.[76] have developed a method to estimate
the airborne contamination with SARS-CoV-2 particles during speaking,
coughing, and sneezing in an indoor environment. The total volume
of exhaled droplets was higher during sneezing and coughing compared
to speaking and breathing for 20 min (Figure C). Importantly, their study showed that
the probability of contagion is strongly related to the virus concentration
(1% probability of getting infected if the concentration is <105 per mL). Netz at al.[77] developed
an equation describing the physical fate of droplets containing-SARS-CoV-2
produced while speaking, which depends on several parameters (size,
relative humidity, temperature). Their results showed that when speaking,
the virion concentration being exhaled increases, with an increase
in droplets size ranging from 3 to 2 × 105 virion
per min for 1 to 40 μm droplet size, respectively. Standnytskyi
et al. estimated, however, that at a saliva viral load of 7 ×
106 copies/mL, the probability that a 1 μm droplet
nucleus (hydrated 3 μm droplet) contains a single virion is
only 0.01%. However, if the titer is higher by 2–3 orders of
magnitude, the number of exhaled virions in the emitted droplets can
be expected to be ≫105 per min of speaking.[77] Although different tests have reported values
that can span several orders of magnitude, it is clear from the above
discussion that thousands of virions are emitted from infectedpeople
during normal breathing. Based on this statement, we raise the following
question: “Can it be possible to develop a sensor to detect
virions directly from exhaled breath without amplification and long
sample treatment?”.
COVID-19 Detection from Exhaled Breath
The analysis of exhaled breath could be a less invasive method
of analysis for COVID-19 screening.[11,12,79,16] Unfortunately, to date
it has been extremely challenging to detect SARS-CoV-2 from exhaled
breath. SARS-CoV-2 can be detected in air[80−83] and objects that could affect
the air around them (e.g., ventilation fans[84] and on hospital floors[84]), mainly because
the virus remains viable in the air for up to 3 h.[68,84] Of special importance, parts of these studies[80] show that COVID-19patients exhaled millions of severe
acute respiratory syndrome coronavirus RNA copies per hour. Experimental
analyses show that exhaled breath had a higher positive rate (26.9%)
than surface (5.4%) and air (3.8%) samples. Again, this emphasized
the importance of aerosol transmission in virus spread. However, in
order to detect the virus directly from exhaled breath, it was necessary
to collect the sample for a long time with a specific method and technology
called exhaled breath condensate (EBC). As demonstrated in recent
papers, collecting and analyzing breath’s liquid phase (exhaled
breath condensate or aerosol, EBC, and EBA, respectively), nonvolatile
molecules such as RNA, DNA, microorganisms, and viruses can be directly
detected (typically by means of successive PCR-based methods) and
visualized.[85] The use of EBC is related
to the very low viral load in the breath. However, the viral load
of SARS-CoV-2 in aerosol samples is several orders of magnitude below
those in nasopharyngeal swabs, making the detection of the virus from
the air in close contact with positive/acute patients more challenging.[86] The use of EBC[87] solves
this challenge by preconcentrating the virus and its metabolic byproducts
in exhaled breath, as well as large droplets or small aerosol particles
from the epithelial lining fluid to the level of detectable concentrations.
Importantly, even nonvolatile markers are released in the breath as
large droplets or small aerosol particles from the epithelial lining
fluid, and can be assessed in the exhaled breath.[88,78] An EBC device can efficiently collect different particles in relation
to two parameters: (1) the number of collected particles compared
to the total amount of particles in the air; or (2) the fraction of
virus that remains viable after collection. Apart from chilling tubes
(called R-tubes), isolating particles from the breath can be achieved
by specifically designed filters for aerosols, with an electrostatic
concentrator, etc. Challenges associated with this approach is that
the collected aerosol sample is usually ∼1 mL,[89] and the results are affected by the breathing protocol
(e.g., how deep the breath is, etc.). Since the viral load is very
low, sample collection from 10 to 1500 mL/breath should be carried
for a long time (30 min), or the patient should be asked to cough
rather than simply breathing.[18]Studies
on exhaled breath showed that infection leads to a variation
of the microbial flora in the lungs and, as a consequence, to a variation
of exhaled metabolites. The variation of VOCs could be used to diagnose
COVID-19infection.[85,90] In ref (60), for instance, the authors
designed a method for direct detection of the virus, as well as related
C-reactive protein and IgG and IgM markers, which, respectively, indicate
the severity and immune response of the disease. While the detection
of SARS-CoV-2 in saliva could be advantageous in terms of sample collection
compared to nasopharyngeal sampling, the signals obtained are close
to blank signal (sample/blank signal ratio 2.8–16). Grassin-Delyle
et al.[9] measured very specific VOCs in
exhaled breath from mechanically ventilated adults with COVID-19 and
compared that signature to ventilated patients with non-COVID acute
respiratory distress syndrome. VOC-based breath signatures of COVID-19
could be distinguished from control cases with high accuracy. With
this in mind, we think that the analysis of VOCs in breath has the
potential to detect ketogenesis and other hematologic conditions related
to SARS-CoV-2 infection, ensuring rapid detection and noninvasive
sample collection. The rationale behind this approach relies on findings
showing that viral agents and/or the body response (e.g., immune system)
to the infectious/viral agent emit VOCs into the exhaled breath.[11,12] The presence of VOCs in breath occurs in the early stages of the
infection, thus serving for immediate detection of the COVID-19. The
four most prominent VOCs in COVID-19 are methylpent-2-enal, 2,4-octadiene
1-chloroheptane, and nonanal, with typical concentrations of 10 to
250 ppb. Comprehensive reviews regarding the potential of VOCs as
chemical biomarkers for disease diagnostics have been published.[12,11,91]In March 2020, Haick and
co-workers[17] concluded an exploratory clinical
study in Wuhan, China (IRB: ChiCTR2000030556)
that included sampling with a breath analyzer device based on an array
of chemoresistive sensors made of molecularly modified gold nanoparticles
in conjugation with machine-learning methods (Figure ). The study cohort included 41 confirmed
COVID-19patients, 14 symptomatic negative COVID-19patients, and
47 asymptomatic controls. Positive COVID-19patients were sampled
twice: (i) during active disease, and (ii) after cure of the disease.
The Discriminant Factor Analysis (DFA) model achieved excellent training
and blind discriminations between the different groups. For example,
discrimination between (i) positive COVID-19patients vs control resulted
with 76% accuracy and 100% sensitivity; (ii) positive COVID-19 vs
negative COVID-19patients achieved 95% accuracy and 100% sensitivity;
and (iii) positive COVID-19patients before and after curing with
88% accuracy and 83% sensitivity (Figure ).[17] In another
study, researchers monitored early traces of mitochondrial reactive
oxygen species (ROS) elevated production as expressed in sputum samples.[92] In this way, the introduction of sputum samples
to an electrochemical sensor functionalized with multiwalled carbon
nanotubes gave 97% true positive detection results within 30 s (Figure ).
Figure 4
(a) Example of breath
collection with the developed breathalyzer
from a patient in Wuhan, China. (b) Representative response of a sensor
to three different breath samples. The normalized response of the
same in the breathalyzer to three different samples: patient A, COVID-19,
first sample when infected; patient A, second sample after being determined
as recovered; and healthy control. The x-axis represents
the cycle measurement. (c–f) Diagnosis of COVID-19 patients
based on breath sample response. Panels c, d, and e show data classification
from sensor responses to breath samples as represented by the canonical
variable of the discriminant analysis. Box plots of the first canonical
score of the training set (70% of the samples) and test set (30% of
the samples). The horizontal dashed line in the box plots represents
the cutoff value of the model: true positive (TP), true negative (TN),
false positive (FP), false negative (FN). (c) COVID-19 patients (n = 41) and healthy controls (n = 57).
(d) COVID-19 patients (n = 41) and other lung infection/condition
controls (n = 32). (e) COVID-19 patients at first
(n = 41) and second sampling (n =
21). (f) ROC curves for the breath-sensor response in patients with
COVID-19 (Co) infection compared with controls (C) (black); in COVID-19
infection compared with other lung infection/conditions (LI), (red);
and in COVID-19 infection first sample (Co1) compared to COVID-19
infection second sample (Co2) (blue). †p < 0.0001. (Reproduced with permission from ref (17) ACS Publications).
Figure 5
(a) COVID-19 ROS diagnosis (CRD) system consists of three
needle
electrodes coated with functionalized multiwall carbon nanotubes.
(b) Selective electrochemical reactions of released ROS on MWCNTs
produces cathodic ionic peaks. (c) ROS-related electrochemical cyclic
voltammetry cathodic peaks from the fresh sputum of two different
patients were involved in COVID-19 and hospitalized in comparison
with a confirmed normal case. (Reproduced with permission from ref (92). Elsevier Ltd.).
(a) Example of breath
collection with the developed breathalyzer
from a patient in Wuhan, China. (b) Representative response of a sensor
to three different breath samples. The normalized response of the
same in the breathalyzer to three different samples: patient A, COVID-19,
first sample when infected; patient A, second sample after being determined
as recovered; and healthy control. The x-axis represents
the cycle measurement. (c–f) Diagnosis of COVID-19patients
based on breath sample response. Panels c, d, and e show data classification
from sensor responses to breath samples as represented by the canonical
variable of the discriminant analysis. Box plots of the first canonical
score of the training set (70% of the samples) and test set (30% of
the samples). The horizontal dashed line in the box plots represents
the cutoff value of the model: true positive (TP), true negative (TN),
false positive (FP), false negative (FN). (c) COVID-19patients (n = 41) and healthy controls (n = 57).
(d) COVID-19patients (n = 41) and other lung infection/condition
controls (n = 32). (e) COVID-19patients at first
(n = 41) and second sampling (n =
21). (f) ROC curves for the breath-sensor response in patients with
COVID-19 (Co) infection compared with controls (C) (black); in COVID-19infection compared with other lung infection/conditions (LI), (red);
and in COVID-19infection first sample (Co1) compared to COVID-19infection second sample (Co2) (blue). †p < 0.0001. (Reproduced with permission from ref (17) ACS Publications).(a) COVID-19ROS diagnosis (CRD) system consists of three
needle
electrodes coated with functionalized multiwall carbon nanotubes.
(b) Selective electrochemical reactions of released ROS on MWCNTs
produces cathodic ionic peaks. (c) ROS-related electrochemical cyclic
voltammetry cathodic peaks from the fresh sputum of two different
patients were involved in COVID-19 and hospitalized in comparison
with a confirmed normal case. (Reproduced with permission from ref (92). Elsevier Ltd.).
Conclusions and Future Outlook
The
recent COVID-19 pandemic has exposed the world to very serious
challenges in fast diagnostics and monitoring of the outbreak. Selective
sensing approaches that rely on specific and well-defined targets,
such as in PCR, have been adopted toward fast diagnostics, but substantial
pitfalls still exist. Indeed, such detection techniques are very disease-specific
and their adaptation in the case of SARS-CoV-2 mutations requires
significant effort and time. On the other hand, the use of a nonspecific
sensing approach, mainly using breath samples, could go a long way
toward healthful, responsible self-care.We expect that breath-based
detection methods, mainly online ones,
will significantly reduce unnecessary exposure to contagious persons
and support the fight against the COVID-19 pandemic. Moreover, it
will reduce the number of excessive confirmatory tests and lower the
burden on the hospitals, while allowing individuals a screening solution
that can be used at home, PoC, and central facilities. The application
of these approaches could incorporate secure data transmission components
to enable ethical and privacy-ensured diagnosis and monitoring by
physicians, national health systems, and worldwide health organizations.
By creating a sample database, predictive models can be established
for disease development among high-risk groups, regarding the hospitalization
period and prognosis for positive patients. Breath-based approaches
will enable adequate patient diagnosis, treatment, and follow-up,
including continual screening of at-risk populations and real-time
monitoring of epidemics. They will provide population-wide and location-based
data for statistical analysis and data mining, and thereby facilitating
the in-depth epidemiological study. They will also gather valuable
information about future needs for infectious disease screening and
monitoring among populations.Using an advanced algorithm that
merges deep analysis with powerful
prediction capabilities from breath sensing platforms could help decision-makers
and healthcare systems improve the way COVID-19 information is approached.
This way, an integrated platform will enable continuous patient support,
from predictive diagnosis to follow-up of COVID-19. It will reduce
time, cost, and number of unneeded confirmatory tests, lowering the
burden on hospitals. During hospitalization or home isolation, a breath
analysis will serve as a monitoring tool for assessing the efficacy
of treatment and disease regression. By creating a sample database,
models can be established for predicting disease development among
the high-risk groups, and hospitalization periods and prognosis for
positive patients. The breath analysis platform will enable not only
adequate patient diagnosis, treatment, and follow-up, but also continual
screening of at-risk populations and real-time monitoring of epidemics.
Although we think that the direct detection of SARS-CoV-2 virions
from exhaled breath is not yet technologically possible, it is reasonable
to develop new sensing devices that can effectively extract information
from the exhaled breath to monitor patient status in real-time. In
a world where everybody is wearing a face mask, the integration of
a sensor on every single mask could radically revolutionize the monitoring
of COVID-19 spread. A strong effort is needed to reach this goal,
but the world community should be seeking this objective.
Authors: I Horváth; J Hunt; P J Barnes; K Alving; A Antczak; E Baraldi; G Becher; W J C van Beurden; M Corradi; R Dekhuijzen; R A Dweik; T Dwyer; R Effros; S Erzurum; B Gaston; C Gessner; A Greening; L P Ho; J Hohlfeld; Q Jöbsis; D Laskowski; S Loukides; D Marlin; P Montuschi; A C Olin; A E Redington; P Reinhold; E L J van Rensen; I Rubinstein; P Silkoff; K Toren; G Vass; C Vogelberg; H Wirtz Journal: Eur Respir J Date: 2005-09 Impact factor: 16.671
Authors: Sean Wei Xiang Ong; Yian Kim Tan; Po Ying Chia; Tau Hong Lee; Oon Tek Ng; Michelle Su Yen Wong; Kalisvar Marimuthu Journal: JAMA Date: 2020-04-28 Impact factor: 56.272