Literature DB >> 32317844

Optimization Methods for Magnetic Resonance Image Reconstruction: Key Models and Optimization Algorithms.

Jeffrey A Fessler1.   

Abstract

The development of compressed sensing methods for magnetic resonance (MR) image reconstruction led to an explosion of research on models and optimization algorithms for MR imaging (MRI). Roughly 10 years after such methods first appeared in the MRI literature, the U.S. Food and Drug Administration (FDA) approved certain compressed sensing methods for commercial use, making compressed sensing a clinical success story for MRI. This review paper summarizes several key models and optimization algorithms for MR image reconstruction, including both the type of methods that have FDA approval for clinical use, as well as more recent methods being considered in the research community that use data-adaptive regularizers. Many algorithms have been devised that exploit the structure of the system model and regularizers used in MRI; this paper strives to collect such algorithms in a single survey.

Entities:  

Year:  2020        PMID: 32317844      PMCID: PMC7172344          DOI: 10.1109/MSP.2019.2943645

Source DB:  PubMed          Journal:  IEEE Signal Process Mag        ISSN: 1053-5888            Impact factor:   12.551


  21 in total

1.  Advances in sensitivity encoding with arbitrary k-space trajectories.

Authors:  K P Pruessmann; M Weiger; P Börnert; P Boesiger
Journal:  Magn Reson Med       Date:  2001-10       Impact factor: 4.668

2.  Fast, iterative image reconstruction for MRI in the presence of field inhomogeneities.

Authors:  Bradley P Sutton; Douglas C Noll; Jeffrey A Fessler
Journal:  IEEE Trans Med Imaging       Date:  2003-02       Impact factor: 10.048

3.  Generalized autocalibrating partially parallel acquisitions (GRAPPA).

Authors:  Mark A Griswold; Peter M Jakob; Robin M Heidemann; Mathias Nittka; Vladimir Jellus; Jianmin Wang; Berthold Kiefer; Axel Haase
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

4.  Undersampled MRI reconstruction with patch-based directional wavelets.

Authors:  Xiaobo Qu; Di Guo; Bende Ning; Yingkun Hou; Yulan Lin; Shuhui Cai; Zhong Chen
Journal:  Magn Reson Imaging       Date:  2012-04-13       Impact factor: 2.546

5.  The NMR phased array.

Authors:  P B Roemer; W A Edelstein; C E Hayes; S P Souza; O M Mueller
Journal:  Magn Reson Med       Date:  1990-11       Impact factor: 4.668

6.  Fast gradient-based algorithms for constrained total variation image denoising and deblurring problems.

Authors:  Amir Beck; Marc Teboulle
Journal:  IEEE Trans Image Process       Date:  2009-07-24       Impact factor: 10.856

7.  Fast parallel MR image reconstruction via B1-based, adaptive restart, iterative soft thresholding algorithms (BARISTA).

Authors:  Matthew J Muckley; Douglas C Noll; Jeffrey A Fessler
Journal:  IEEE Trans Med Imaging       Date:  2014-10-14       Impact factor: 10.048

8.  ESPIRiT--an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA.

Authors:  Martin Uecker; Peng Lai; Mark J Murphy; Patrick Virtue; Michael Elad; John M Pauly; Shreyas S Vasanawala; Michael Lustig
Journal:  Magn Reson Med       Date:  2014-03       Impact factor: 4.668

9.  Magnetic resonance fingerprinting.

Authors:  Dan Ma; Vikas Gulani; Nicole Seiberlich; Kecheng Liu; Jeffrey L Sunshine; Jeffrey L Duerk; Mark A Griswold
Journal:  Nature       Date:  2013-03-14       Impact factor: 49.962

10.  Accelerating compressed sensing in parallel imaging reconstructions using an efficient circulant preconditioner for cartesian trajectories.

Authors:  Kirsten Koolstra; Jeroen van Gemert; Peter Börnert; Andrew Webb; Rob Remis
Journal:  Magn Reson Med       Date:  2018-08-07       Impact factor: 4.668

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  8 in total

1.  Dense Recurrent Neural Networks for Accelerated MRI: History-Cognizant Unrolling of Optimization Algorithms.

Authors:  Seyed Amir Hossein Hosseini; Burhaneddin Yaman; Steen Moeller; Mingyi Hong; Mehmet Akçakaya
Journal:  IEEE J Sel Top Signal Process       Date:  2020-06-17       Impact factor: 6.856

2.  Compressed Sensing MRI with ℓ1-Wavelet Reconstruction Revisited Using Modern Data Science Tools.

Authors:  Hongyi Gu; Burhaneddin Yaman; Kamil Ugurbil; Steen Moeller; Mehmet Akcakaya
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2021-11

3.  20-fold Accelerated 7T fMRI Using Referenceless Self-Supervised Deep Learning Reconstruction.

Authors:  Omer Burak Demirel; Burhaneddin Yaman; Logan Dowdle; Steen Moeller; Luca Vizioli; Essa Yacoub; John Strupp; Cheryl A Olman; Kamil Ugurbil; Mehmet Akcakaya
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2021-11

4.  EXPECTATION CONSISTENT PLUG-AND-PLAY FOR MRI.

Authors:  Saurav K Shastri; Rizwan Ahmad; Christopher A Metzler; Philip Schniter
Journal:  Proc IEEE Int Conf Acoust Speech Signal Process       Date:  2022-04-27

5.  Inpainted Image Reconstruction Using an Extended Hopfield Neural Network Based Machine Learning System.

Authors:  Wieslaw Citko; Wieslaw Sienko
Journal:  Sensors (Basel)       Date:  2022-01-21       Impact factor: 3.576

6.  Implicit data crimes: Machine learning bias arising from misuse of public data.

Authors:  Efrat Shimron; Jonathan I Tamir; Ke Wang; Michael Lustig
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-21       Impact factor: 12.779

7.  Deep learning-based single image super-resolution for low-field MR brain images.

Authors:  M L de Leeuw den Bouter; G Ippolito; T P A O'Reilly; R F Remis; M B van Gijzen; A G Webb
Journal:  Sci Rep       Date:  2022-04-16       Impact factor: 4.996

8.  Revisiting [Formula: see text]-wavelet compressed-sensing MRI in the era of deep learning.

Authors:  Hongyi Gu; Burhaneddin Yaman; Steen Moeller; Jutta Ellermann; Kamil Ugurbil; Mehmet Akçakaya
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-08       Impact factor: 12.779

  8 in total

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