Literature DB >> 34892016

Compressed Sensing MRI with ℓ1-Wavelet Reconstruction Revisited Using Modern Data Science Tools.

Hongyi Gu, Burhaneddin Yaman, Kamil Ugurbil, Steen Moeller, Mehmet Akcakaya.   

Abstract

Deep learning (DL) has emerged as a powerful tool for improving the reconstruction quality of accelerated MRI. These methods usually show enhanced performance compared to conventional methods, such as compressed sensing (CS) and parallel imaging. However, in most scenarios, CS is implemented with two or three empirically-tuned hyperparameters, while a plethora of advanced data science tools are used in DL. In this work, we revisit ℓ1 -wavelet CS for accelerated MRI using modern data science tools. By using tools like algorithm unrolling and end-to-end training with stochastic gradient descent over large databases that DL algorithms utilize, and combining these with conventional concepts like wavelet sub-band processing and reweighted ℓ1 minimization, we show that ℓ1-wavelet CS can be fine-tuned to a level comparable to DL methods. While DL uses hundreds of thousands of parameters, the proposed optimized ℓ1-wavelet CS with sub-band training and reweighting uses only 128 parameters, and employs a fully-explainable convex reconstruction model.

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Year:  2021        PMID: 34892016      PMCID: PMC8918052          DOI: 10.1109/EMBC46164.2021.9630985

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  17 in total

1.  SENSE: sensitivity encoding for fast MRI.

Authors:  K P Pruessmann; M Weiger; M B Scheidegger; P Boesiger
Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

2.  Generalized autocalibrating partially parallel acquisitions (GRAPPA).

Authors:  Mark A Griswold; Peter M Jakob; Robin M Heidemann; Mathias Nittka; Vladimir Jellus; Jianmin Wang; Berthold Kiefer; Axel Haase
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

3.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

Authors:  Michael Lustig; David Donoho; John M Pauly
Journal:  Magn Reson Med       Date:  2007-12       Impact factor: 4.668

4.  Projection onto Epigraph Sets for Rapid Self-Tuning Compressed Sensing MRI.

Authors:  Mohammad Shahdloo; Efe Ilicak; Mohammad Tofighi; Emine U Saritas; A Enis Cetin; Tolga Cukur
Journal:  IEEE Trans Med Imaging       Date:  2018-12-07       Impact factor: 10.048

5.  ACCELERATING MAGNETIC RESONANCE IMAGING VIA DEEP LEARNING.

Authors:  Shanshan Wang; Zhenghang Su; Leslie Ying; Xi Peng; Shun Zhu; Feng Liang; Dagan Feng; Dong Liang
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016-06-16

6.  fastMRI: A Publicly Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image Reconstruction Using Machine Learning.

Authors:  Florian Knoll; Jure Zbontar; Anuroop Sriram; Matthew J Muckley; Mary Bruno; Aaron Defazio; Marc Parente; Krzysztof J Geras; Joe Katsnelson; Hersh Chandarana; Zizhao Zhang; Michal Drozdzalv; Adriana Romero; Michael Rabbat; Pascal Vincent; James Pinkerton; Duo Wang; Nafissa Yakubova; Erich Owens; C Lawrence Zitnick; Michael P Recht; Daniel K Sodickson; Yvonne W Lui
Journal:  Radiol Artif Intell       Date:  2020-01-29

7.  Deep-Learning Methods for Parallel Magnetic Resonance Imaging Reconstruction: A Survey of the Current Approaches, Trends, and Issues.

Authors:  Florian Knoll; Kerstin Hammernik; Chi Zhang; Steen Moeller; Thomas Pock; Daniel K Sodickson; Mehmet Akçakaya
Journal:  IEEE Signal Process Mag       Date:  2020-01-20       Impact factor: 12.551

8.  Learning a variational network for reconstruction of accelerated MRI data.

Authors:  Kerstin Hammernik; Teresa Klatzer; Erich Kobler; Michael P Recht; Daniel K Sodickson; Thomas Pock; Florian Knoll
Journal:  Magn Reson Med       Date:  2017-11-08       Impact factor: 4.668

9.  Deep Generative Adversarial Neural Networks for Compressive Sensing MRI.

Authors:  Morteza Mardani; Enhao Gong; Joseph Y Cheng; Shreyas S Vasanawala; Greg Zaharchuk; Lei Xing; John M Pauly
Journal:  IEEE Trans Med Imaging       Date:  2018-07-23       Impact factor: 10.048

10.  ESPIRiT--an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA.

Authors:  Martin Uecker; Peng Lai; Mark J Murphy; Patrick Virtue; Michael Elad; John M Pauly; Shreyas S Vasanawala; Michael Lustig
Journal:  Magn Reson Med       Date:  2014-03       Impact factor: 4.668

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  2 in total

1.  Revisiting [Formula: see text]-wavelet compressed-sensing MRI in the era of deep learning.

Authors:  Hongyi Gu; Burhaneddin Yaman; Steen Moeller; Jutta Ellermann; Kamil Ugurbil; Mehmet Akçakaya
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-08       Impact factor: 12.779

2.  A review and experimental evaluation of deep learning methods for MRI reconstruction.

Authors:  Arghya Pal; Yogesh Rathi
Journal:  J Mach Learn Biomed Imaging       Date:  2022-03-11
  2 in total

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