Literature DB >> 34892055

20-fold Accelerated 7T fMRI Using Referenceless Self-Supervised Deep Learning Reconstruction.

Omer Burak Demirel, Burhaneddin Yaman, Logan Dowdle, Steen Moeller, Luca Vizioli, Essa Yacoub, John Strupp, Cheryl A Olman, Kamil Ugurbil, Mehmet Akcakaya.   

Abstract

High spatial and temporal resolution across the whole brain is essential to accurately resolve neural activities in fMRI. Therefore, accelerated imaging techniques target improved coverage with high spatio-temporal resolution. Simultaneous multi-slice (SMS) imaging combined with in-plane acceleration are used in large studies that involve ultrahigh field fMRI, such as the Human Connectome Project. However, for even higher acceleration rates, these methods cannot be reliably utilized due to aliasing and noise artifacts. Deep learning (DL) reconstruction techniques have recently gained substantial interest for improving highly-accelerated MRI. Supervised learning of DL reconstructions generally requires fully-sampled training datasets, which is not available for high-resolution fMRI studies. To tackle this challenge, self-supervised learning has been proposed for training of DL reconstruction with only undersampled datasets, showing similar performance to supervised learning. In this study, we utilize a self-supervised physics-guided DL reconstruction on a 5-fold SMS and 4-fold in-plane accelerated 7T fMRI data. Our results show that our self-supervised DL reconstruction produce high-quality images at this 20-fold acceleration, substantially improving on existing methods, while showing similar functional precision and temporal effects in the subsequent analysis compared to a standard 10-fold accelerated acquisition.

Entities:  

Mesh:

Year:  2021        PMID: 34892055      PMCID: PMC8923746          DOI: 10.1109/EMBC46164.2021.9631107

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  20 in total

Review 1.  What we can do and what we cannot do with fMRI.

Authors:  Nikos K Logothetis
Journal:  Nature       Date:  2008-06-12       Impact factor: 49.962

2.  AFNI: software for analysis and visualization of functional magnetic resonance neuroimages.

Authors:  R W Cox
Journal:  Comput Biomed Res       Date:  1996-06

3.  Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI.

Authors:  Steen Moeller; Essa Yacoub; Cheryl A Olman; Edward Auerbach; John Strupp; Noam Harel; Kâmil Uğurbil
Journal:  Magn Reson Med       Date:  2010-05       Impact factor: 4.668

Review 4.  Recent advances in parallel imaging for MRI.

Authors:  Jesse Hamilton; Dominique Franson; Nicole Seiberlich
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-05-02       Impact factor: 9.795

5.  Blipped-controlled aliasing in parallel imaging for simultaneous multislice echo planar imaging with reduced g-factor penalty.

Authors:  Kawin Setsompop; Borjan A Gagoski; Jonathan R Polimeni; Thomas Witzel; Van J Wedeen; Lawrence L Wald
Journal:  Magn Reson Med       Date:  2011-08-19       Impact factor: 4.668

6.  Deep-Learning Methods for Parallel Magnetic Resonance Imaging Reconstruction: A Survey of the Current Approaches, Trends, and Issues.

Authors:  Florian Knoll; Kerstin Hammernik; Chi Zhang; Steen Moeller; Thomas Pock; Daniel K Sodickson; Mehmet Akçakaya
Journal:  IEEE Signal Process Mag       Date:  2020-01-20       Impact factor: 12.551

7.  Learning a variational network for reconstruction of accelerated MRI data.

Authors:  Kerstin Hammernik; Teresa Klatzer; Erich Kobler; Michael P Recht; Daniel K Sodickson; Thomas Pock; Florian Knoll
Journal:  Magn Reson Med       Date:  2017-11-08       Impact factor: 4.668

Review 8.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

9.  Improved simultaneous multislice cardiac MRI using readout concatenated k-space SPIRiT (ROCK-SPIRiT).

Authors:  Omer Burak Demirel; Sebastian Weingärtner; Steen Moeller; Mehmet Akçakaya
Journal:  Magn Reson Med       Date:  2021-02-10       Impact factor: 3.737

10.  Evaluation of 2D multiband EPI imaging for high-resolution, whole-brain, task-based fMRI studies at 3T: Sensitivity and slice leakage artifacts.

Authors:  Nick Todd; Steen Moeller; Edward J Auerbach; Essa Yacoub; Guillaume Flandin; Nikolaus Weiskopf
Journal:  Neuroimage       Date:  2015-09-01       Impact factor: 6.556

View more
  1 in total

1.  Unsupervised Deep Learning Methods for Biological Image Reconstruction and Enhancement: An overview from a signal processing perspective.

Authors:  Mehmet Akçakaya; Burhaneddin Yaman; Hyungjin Chung; Jong Chul Ye
Journal:  IEEE Signal Process Mag       Date:  2022-02-24       Impact factor: 15.204

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.