Literature DB >> 33747334

Dense Recurrent Neural Networks for Accelerated MRI: History-Cognizant Unrolling of Optimization Algorithms.

Seyed Amir Hossein Hosseini1, Burhaneddin Yaman1, Steen Moeller2, Mingyi Hong3, Mehmet Akçakaya1.   

Abstract

Inverse problems for accelerated MRI typically incorporate domain-specific knowledge about the forward encoding operator in a regularized reconstruction framework. Recently physics-driven deep learning (DL) methods have been proposed to use neural networks for data-driven regularization. These methods unroll iterative optimization algorithms to solve the inverse problem objective function, by alternating between domain-specific data consistency and data-driven regularization via neural networks. The whole unrolled network is then trained end-to-end to learn the parameters of the network. Due to simplicity of data consistency updates with gradient descent steps, proximal gradient descent (PGD) is a common approach to unroll physics-driven DL reconstruction methods. However, PGD methods have slow convergence rates, necessitating a higher number of unrolled iterations, leading to memory issues in training and slower reconstruction times in testing. Inspired by efficient variants of PGD methods that use a history of the previous iterates, we propose a history-cognizant unrolling of the optimization algorithm with dense connections across iterations for improved performance. In our approach, the gradient descent steps are calculated at a trainable combination of the outputs of all the previous regularization units. We also apply this idea to unrolling variable splitting methods with quadratic relaxation. Our results in reconstruction of the fastMRI knee dataset show that the proposed history-cognizant approach reduces residual aliasing artifacts compared to its conventional unrolled counterpart without requiring extra computational power or increasing reconstruction time.

Entities:  

Keywords:  Inverse problems; MRI reconstruction; neural networks; physics-driven deep learning; recurrent neural networks; unrolled optimization algorithms

Year:  2020        PMID: 33747334      PMCID: PMC7978039          DOI: 10.1109/jstsp.2020.3003170

Source DB:  PubMed          Journal:  IEEE J Sel Top Signal Process        ISSN: 1932-4553            Impact factor:   6.856


  34 in total

1.  Advances in sensitivity encoding with arbitrary k-space trajectories.

Authors:  K P Pruessmann; M Weiger; P Börnert; P Boesiger
Journal:  Magn Reson Med       Date:  2001-10       Impact factor: 4.668

2.  Undersampled MRI reconstruction with patch-based directional wavelets.

Authors:  Xiaobo Qu; Di Guo; Bende Ning; Yingkun Hou; Yulan Lin; Shuhui Cai; Zhong Chen
Journal:  Magn Reson Imaging       Date:  2012-04-13       Impact factor: 2.546

3.  Fast Multiclass Dictionaries Learning With Geometrical Directions in MRI Reconstruction.

Authors:  Zhifang Zhan; Jian-Feng Cai; Di Guo; Yunsong Liu; Zhong Chen; Xiaobo Qu
Journal:  IEEE Trans Biomed Eng       Date:  2015-11-25       Impact factor: 4.538

4.  Undersampled radial MRI with multiple coils. Iterative image reconstruction using a total variation constraint.

Authors:  Kai Tobias Block; Martin Uecker; Jens Frahm
Journal:  Magn Reson Med       Date:  2007-06       Impact factor: 4.668

5.  ADMM-CSNet: A Deep Learning Approach for Image Compressive Sensing.

Authors:  Yan Yang; Jian Sun; Huibin Li; Zongben Xu
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2018-11-28       Impact factor: 6.226

6.  Learned Primal-Dual Reconstruction.

Authors:  Jonas Adler; Ozan Oktem
Journal:  IEEE Trans Med Imaging       Date:  2018-06       Impact factor: 10.048

7.  Low-Dose CT With a Residual Encoder-Decoder Convolutional Neural Network.

Authors:  Hu Chen; Yi Zhang; Mannudeep K Kalra; Feng Lin; Yang Chen; Peixi Liao; Jiliu Zhou; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2017-06-13       Impact factor: 10.048

8.  Low-Dose CT Image Denoising Using a Generative Adversarial Network With Wasserstein Distance and Perceptual Loss.

Authors:  Qingsong Yang; Pingkun Yan; Yanbo Zhang; Hengyong Yu; Yongyi Shi; Xuanqin Mou; Mannudeep K Kalra; Yi Zhang; Ling Sun; Ge Wang
Journal:  IEEE Trans Med Imaging       Date:  2018-06       Impact factor: 10.048

9.  Effects of image reconstruction on fiber orientation mapping from multichannel diffusion MRI: reducing the noise floor using SENSE.

Authors:  S N Sotiropoulos; S Moeller; S Jbabdi; J Xu; J L Andersson; E J Auerbach; E Yacoub; D Feinberg; K Setsompop; L L Wald; T E J Behrens; K Ugurbil; C Lenglet
Journal:  Magn Reson Med       Date:  2013-02-07       Impact factor: 4.668

10.  ESPIRiT--an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA.

Authors:  Martin Uecker; Peng Lai; Mark J Murphy; Patrick Virtue; Michael Elad; John M Pauly; Shreyas S Vasanawala; Michael Lustig
Journal:  Magn Reson Med       Date:  2014-03       Impact factor: 4.668

View more
  5 in total

1.  Compressed Sensing MRI with ℓ1-Wavelet Reconstruction Revisited Using Modern Data Science Tools.

Authors:  Hongyi Gu; Burhaneddin Yaman; Kamil Ugurbil; Steen Moeller; Mehmet Akcakaya
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2021-11

2.  20-fold Accelerated 7T fMRI Using Referenceless Self-Supervised Deep Learning Reconstruction.

Authors:  Omer Burak Demirel; Burhaneddin Yaman; Logan Dowdle; Steen Moeller; Luca Vizioli; Essa Yacoub; John Strupp; Cheryl A Olman; Kamil Ugurbil; Mehmet Akcakaya
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2021-11

3.  Residual RAKI: A hybrid linear and non-linear approach for scan-specific k-space deep learning.

Authors:  Chi Zhang; Steen Moeller; Omer Burak Demirel; Kâmil Uğurbil; Mehmet Akçakaya
Journal:  Neuroimage       Date:  2022-04-27       Impact factor: 7.400

4.  Improved simultaneous multislice cardiac MRI using readout concatenated k-space SPIRiT (ROCK-SPIRiT).

Authors:  Omer Burak Demirel; Sebastian Weingärtner; Steen Moeller; Mehmet Akçakaya
Journal:  Magn Reson Med       Date:  2021-02-10       Impact factor: 3.737

5.  Multi-Coil MRI Reconstruction Challenge-Assessing Brain MRI Reconstruction Models and Their Generalizability to Varying Coil Configurations.

Authors:  Youssef Beauferris; Jonas Teuwen; Dimitrios Karkalousos; Nikita Moriakov; Matthan Caan; George Yiasemis; Lívia Rodrigues; Alexandre Lopes; Helio Pedrini; Letícia Rittner; Maik Dannecker; Viktor Studenyak; Fabian Gröger; Devendra Vyas; Shahrooz Faghih-Roohi; Amrit Kumar Jethi; Jaya Chandra Raju; Mohanasankar Sivaprakasam; Mike Lasby; Nikita Nogovitsyn; Wallace Loos; Richard Frayne; Roberto Souza
Journal:  Front Neurosci       Date:  2022-07-06       Impact factor: 5.152

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.