| Literature DB >> 32244444 |
Kinga Judit Fodor1, Dániel Hutai1, Tamás Jernei2, Angéla Takács3, Zsófia Szász3, Máté Sulyok-Eiler4, Veronika Harmat4, Rita Oláh Szabó2, Gitta Schlosser2,5, Ferenc Hudecz1,2, László Kőhidai3, Antal Csámpai1.
Abstract
Use of a Pictet-Spengler reaction of tryptamine and l-tryptophan methyl ester and subsequent reduction of the nitro group followed by further cyclocondensation with aryl aldehydes and formyl-substituted carboxylic acids, including ferrocene-based components, furnished a series of diastereomeric 6-aryl-substituted 5,6,8,9,14,14b-hexahydroindolo[2',3':3,4]pyrido[1-c]-quinazolines and 5,5b,17,18-tetrahydroindolo[2',3':3,4]pyrido[1,2-c]isoindolo[2,1-a]quinazolin-11-(15bH)-ones with the elements of central-, planar and conformational chirality. The relative configuration and the conformations of the novel polycyclic indole derivatives were determined by 1H- and 13C-NMR methods supplemented by comparative DFT analysis of the possible diastereomers. The structure of one of the pentacyclic methyl esters with defined absolute configuration "S" was also confirmed by single crystal X-ray diffraction measurement. Accounting for the characteristic substituent-dependent diastereoselective formation of the products multistep mechanisms were proposed on the basis of the results of DFT modeling. Preliminary in vitro cytotoxic assays of the products revealed moderate-to-significant antiproliferative effects against PANC-1-, COLO-205-, A-2058 and EBC-1 cell lines that proved to be highly dependent on the stereostructure and on the substitution pattern of the pending aryl substituent.Entities:
Keywords: DFT calculations; NMR spectroscopy; X-ray diffraction; conformation; cytotoxic activity; diastereoselectivity; ferrocene; organic synthesis; structure-activity relationships; β-carboline
Mesh:
Substances:
Year: 2020 PMID: 32244444 PMCID: PMC7181298 DOI: 10.3390/molecules25071599
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Three types of the targeted polycyclic β-carbolines with diverse streostructures derived from tryptamin (R = H) and l-tryptophan (R = CO2Me).
Scheme 1Synthetic routes to novel diastereomeric 6-aryl-5,6,8,9,14,14b-hexahydroindolo-[2′,3′:3,4]pyrido-[1,2-c]quinazolines (the relative/absolute configuration is presented for compounds with R = H/R = CO2Me.).
Isolated yields of pentacyclic compounds types 8 and 9 presented in Scheme 1.
| Product | Yield (Reaction Time) | Product | Yield (Reaction Time) |
|---|---|---|---|
| 37% (0.5 h)/77% (12 h) | 80% (0.5 h) e/35% (12 h) e | ||
| 75% (1 h)/72% (12 h) | 80% (1 h)/87% (12 h) | ||
| 79% (1 h)/76% (12 h) | 69% (1 h)/71% (12 h) | ||
| 74% (1 h)/78% (12 h) | 64% (2 h) | ||
| 80% (1 h)/75% (12 h) | 70% (2 h) | ||
| 63% (0.5 h) | 62% (2 h) | ||
| 80% (4 h) a/75% (8 h) b | 73% (2 h) | ||
| 39% (0.5 h) | 71% (2 h) | ||
| 52% (4 h) c | 52% (2 h) | ||
| 72% (0.5 h) d/25% (12 h) d | 56% (2 h) |
a For a ca. 1:3 mixture of cis (C1) and trans (T1) diastereomers. b For a ca. 1:4 mixture of cis (C1) and trans (T1) diastereomers. c For a ca. 3:7 mixture of cis (C1) and trans (T1) diastereomers. d For a ca. 4:3 mixture of cis (C1) and trans (T1) diastereomers. e For a ca. 1:1 mixture of cis (C1) and trans (T1) diastereomers.
Figure 2Stereostructure of trans pentacyclic esther 9f/T1 obtained by single crystal X-ray diffraction (left) and DFT modelling (right).
Relative stability of diastereomer pairs 8/T1-8/C1 calculated by DFT modelling.
| ΔG(T1-C1) [kcal/mol] | ΔG(T1-C1) [kcal/mol] | ΔG(T1-C1) [kcal/mol] | |||
|---|---|---|---|---|---|
|
| −1.13 |
| −3.06 |
| +0.19 |
|
| −1.65 |
| −1.52 |
| −0.75 |
|
| −1.58 |
| −0.47 |
| −1.73 |
|
| −1.48 |
| +0.34 |
Scheme 2Schematic representations and optimized structures of the possible diastereomers of pentacycle 8a/T1 characterised by relative free energy values and barriers of their interconversion proceeding via the presented TS structures as disclosed by a series of DFT modelling studies.
Scheme 3Structures, relative Gibbs free energy values of 8f/C1 and 8f/C2 and the activation barrier of the isomerisation of 8f/C1 into 8f/C2 taking place by N7-inversion with simultaneous flip of ring C.
Scheme 4Cyclization reactions of 1-(2-aminophenyl)-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indoles 5 and 6/T effected by 2-formylbenzoicacid and (Sp).2-formylferrocenecarboxylic acid 7l and 7m, respectively. A selection of optimized structures with absolute configuration obtained by DFT modelling.
Scheme 5Possible pathways with elementary steps suitable for the interpretation of the experimentally observed substituent-controlled aldehyde-mediated diastereoselective transformations of 5 into pentacyclic products (8/C1 and 8/T1) and hexacyclic lactam 10/C1 as suggested by comparative DFT modelling.
Relative stability of selected isomer pairs to rationalize of the substituent- and time-dependent interconversion of cis- and trans-pentacycles 8/C1 and 8/T1, as resulted from DFT modeling studies.
| Relative Stability of Intermediate Pairs Expressed in ΔG [kcal/mol] | ||||
|---|---|---|---|---|
| Diastereoselectivity of primary coupling to | ||||
| Diastereoselectivity of primary coupling to | ||||
| Readiness of rotation | ||||
| Readiness of rotation | ||||
| Readiness of isomerisation | ||||
| Readiness of isomerisation | ||||
| Preference of isomerization pathway via | ||||
a The value can also be considered as a selectivity descriptor for the alternative primary coupling modes 5+7→12 and 5+7 →13 disclosing the latter as the preferred one (highlighted by italics). b Refers to 16−14. c Refers to 16−14.
Figure 3Optimized structure 13/S and its selected MO’s involved in intramolecular interactions contributing to the stability of this cationic intermediate.
In vitro cytotoxic effect of novel polycondensed β-carbolines types 8–11 a, on four human malignant cell lines characterised by half-maximal inhibitory concentration (IC50) values.
| IC50 [M] | ||||
|---|---|---|---|---|
| PANC-1 | COLO-205 | A2058 | EBC-1 | |
|
| 7.0 × 10−6 ± 1.9 × 10−6 | 5.6 × 10−6 ± 5.6 × 10−7 | 1.4 × 10−5 ± 3.2 × 10−6 | 6.4 × 10−6 ± 1.1 × 10−6 |
|
| > 10−4 | > 10−4 | > 10−4 | > 10−4 |
|
| 2.8 × 10−6 ± 1.0 × 10−6 | 1.5 × 10−6 ± 5.9 × 10−7 | 2.5 × 10−6 ± 4.0 × 10−7 | 4.7 × 10−6 ± 4.1 × 10−7 |
|
| > 10−4 | > 10−4 | > 10−4 | > 10−4 |
|
| 2.3 × 10−5 ± 1.1 × 10−6 | 5.0 × 10−5 ± 1.9 × 10−6 | 2.5 × 10−5 ± 9.5 × 10−7 | 2.5 × 10−5 ± 5.8 × 10−7 |
|
| 2.5 × 10−5 ± 1.2 × 10−6 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| 2.6 × 10−5 ± 1.2 × 10−6 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| 5.2 × 10−6 ± 2.3 × 10−6 | 2.5 × 10−6 ± 9.4 × 10−8 | 2.1 × 10−6 ± 1.9 × 10−7 | 4.1 × 10−6 ± 7.8 × 10−7 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | 3.6 × 10−5 ± 1.2510−6 | 1.6 × 10−5 ± 3.0 × 10−6 |
|
| 1.3 × 10−5 ± 1.2 × 10−5 | 2.0 × 10−5 ± 7.6 × 10−7 | 2.6 × 10−5 ± 1.6 × 10−6 | 1.1 × 10−5 ± 5.2 × 10−6 |
|
| > 10−4 | > 10−4 | > 10−4 | > 10−4 |
|
| > 5.0 × 10−5 | 3.9 × 10−5 ± 1.1 × 10−6 | 5.0 × 10−5 ± 5.4 × 10−6 | 2.3 × 10−5 ± 1.1 × 10−6 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | 4.7 × 10−5 ± 2.1 × 10−6 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | 1.4 × 10−5 ± 3.2 × 10−6 | 5.5 × 10−6 ± 1.9 × 10−7 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 | > 5.0 × 10−5 |
|
| > 5.0 × 10−5 | > 5.0 × 10−5 | 3.8 × 10−5 ± 8.8 × 10−7 | 3.2 × 10−5 ± 2.5 × 10−5 |
|
| > 10−4 | > 10−4 | > 10−4 | > 10−5 |
|
| 2.9 × 10−5 ± 2.4 × 10−6 | > 5.0 × 10−5 | 5.6 × 10−6 ± 1.3 × 10−7 | 2.1 × 10−5 ± 1.5 × 10−6 |
a Compounds 8a–g,j,k/T1, 8f,g/C1 and 10/C1 were measured in racemic form, while compounds 8m*/C1, 9a–d,f–h/T1 and 11/C1 were tested as single enantiomers. b Approximately 1:4 mixture of cis (C1) and trans (T1) diastereomers. c Approximately 3:7 mixture of cis (C1) and trans (T1) diastereomers. d Approximately 4:3 mixture of cis (C1) and trans (T1) diastereomers. e Approximately 1:1 mixture of cis (C1) and trans (T1) diastereomers.