Literature DB >> 32226278

Solution thermochemistry of concanavalin A tetramer conformers measured by variable-temperature ESI-IMS-MS.

Tarick J El-Baba1, David E Clemmer1.   

Abstract

Variable-temperature nano-electrospray ionization coupled with ion mobility spectrometry-mass spectrometry is used to investigate the thermal denaturation of the tetrameric protein concanavalin A. As the solution temperature is increased, changes in mass spectra and collision cross section distributions provide evidence for discrete structural changes that occur at temperatures that are ~40 to 50 degrees below the temperature required for tetramer dissociation. The subtle structural changes are associated with four distinct tetramer conformations with unique melting temperatures. Gibbs-Helmholtz analysis of the free energies determined with respect to the most abundant "native" state yields heat capacities of ΔCp = 1.6 ± 0.3, -2.2 ± 0.4, and -2.9 ± 1.6 kJ·K-1·mol-1, and temperature dependent enthalpies and entropies for the three non-native conformations. Analysis of the thermochemistry indicates that the high-temperature products are entropically stable until the threshold for tetramer dissociation, and changes in heat capacity are consistent with increases in solvation of polar residues. Our findings suggest these high-temperature non-native states result from an increase in disorder at surface exposed regions. Such studies provide valuable insight towards the structural details of non-native states.

Entities:  

Year:  2019        PMID: 32226278      PMCID: PMC7100878          DOI: 10.1016/j.ijms.2019.06.004

Source DB:  PubMed          Journal:  Int J Mass Spectrom        ISSN: 1387-3806            Impact factor:   1.986


  48 in total

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Authors:  Justin L P Benesch; Frank Sobott; Carol V Robinson
Journal:  Anal Chem       Date:  2003-05-15       Impact factor: 6.986

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Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

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Authors:  Alan R Fersht
Journal:  Nat Rev Mol Cell Biol       Date:  2008-06-25       Impact factor: 94.444

Review 5.  From Levinthal to pathways to funnels.

Authors:  K A Dill; H S Chan
Journal:  Nat Struct Biol       Date:  1997-01

6.  Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability.

Authors:  Pascal Leuenberger; Stefan Ganscha; Abdullah Kahraman; Valentina Cappelletti; Paul J Boersema; Christian von Mering; Manfred Claassen; Paola Picotti
Journal:  Science       Date:  2017-02-24       Impact factor: 47.728

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Authors:  C B Anfinsen
Journal:  Science       Date:  1973-07-20       Impact factor: 47.728

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Review 9.  Engineering enzymes for noncanonical amino acid synthesis.

Authors:  Patrick J Almhjell; Christina E Boville; Frances H Arnold
Journal:  Chem Soc Rev       Date:  2018-10-03       Impact factor: 54.564

10.  Refined structure of concanavalin A complexed with methyl alpha-D-mannopyranoside at 2.0 A resolution and comparison with the saccharide-free structure.

Authors:  J H Naismith; C Emmerich; J Habash; S J Harrop; J R Helliwell; W N Hunter; J Raftery; A J Kalb; J Yariv
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-11-01
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  11 in total

1.  Trapped Ion Mobility Spectrometry of Native Macromolecular Assemblies.

Authors:  Kevin Jeanne Dit Fouque; Alyssa Garabedian; Fenfei Leng; Yuk-Ching Tse-Dinh; Mark E Ridgeway; Melvin A Park; Francisco Fernandez-Lima
Journal:  Anal Chem       Date:  2021-01-25       Impact factor: 6.986

2.  First-Principles Collision Cross Section Measurements of Large Proteins and Protein Complexes.

Authors:  Jacob W McCabe; Christopher S Mallis; Klaudia I Kocurek; Michael L Poltash; Mehdi Shirzadeh; Michael J Hebert; Liqi Fan; Thomas E Walker; Xueyun Zheng; Ting Jiang; Shiyu Dong; Cheng-Wei Lin; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2020-07-28       Impact factor: 6.986

3.  Following Structural Changes by Thermal Denaturation Using Trapped Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Kevin Jeanne Dit Fouque; Francisco Fernandez-Lima
Journal:  J Phys Chem B       Date:  2020-07-14       Impact factor: 2.991

4.  Melting of Hemoglobin in Native Solutions as measured by IMS-MS.

Authors:  Daniel W Woodall; Christopher J Brown; Shannon A Raab; Tarick J El-Baba; Arthur Laganowsky; David H Russell; David E Clemmer
Journal:  Anal Chem       Date:  2020-02-07       Impact factor: 6.986

Review 5.  Variable-Temperature Native Mass Spectrometry for Studies of Protein Folding, Stabilities, Assembly, and Molecular Interactions.

Authors:  Arthur Laganowsky; David E Clemmer; David H Russell
Journal:  Annu Rev Biophys       Date:  2021-12-21       Impact factor: 19.763

Review 6.  THE IMS PARADOX: A PERSPECTIVE ON STRUCTURAL ION MOBILITY-MASS SPECTROMETRY.

Authors:  Jacob W McCabe; Michael J Hebert; Mehdi Shirzadeh; Christopher S Mallis; Joanna K Denton; Thomas E Walker; David H Russell
Journal:  Mass Spectrom Rev       Date:  2020-07-01       Impact factor: 10.946

7.  Variable-Temperature Electrospray Ionization for Temperature-Dependent Folding/Refolding Reactions of Proteins and Ligand Binding.

Authors:  Jacob W McCabe; Mehdi Shirzadeh; Thomas E Walker; Cheng-Wei Lin; Benjamin J Jones; Vicki H Wysocki; David P Barondeau; David E Clemmer; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2021-04-27       Impact factor: 6.986

8.  Thermal Analysis of a Mixture of Ribosomal Proteins by vT-ESI-MS: Toward a Parallel Approach for Characterizing the Stabilitome.

Authors:  Tarick J El-Baba; Shannon A Raab; Rachel P Buckley; Christopher J Brown; Corinne A Lutomski; Lucas W Henderson; Daniel W Woodall; Jiangchuan Shen; Jonathan C Trinidad; Hengyao Niu; Martin F Jarrold; David H Russell; Arthur Laganowsky; David E Clemmer
Journal:  Anal Chem       Date:  2021-06-08       Impact factor: 8.008

Review 9.  Temperature-Controlled Electrospray Ionization: Recent Progress and Applications.

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Journal:  Chemistry       Date:  2021-11-05       Impact factor: 5.020

10.  Understanding the Thermal Denaturation of Myoglobin with IMS-MS: Evidence for Multiple Stable Structures and Trapped Pre-equilibrium States.

Authors:  Daniel W Woodall; Lucas W Henderson; Shannon A Raab; Kenji Honma; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2020-07-07       Impact factor: 3.109

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