Literature DB >> 33904705

Variable-Temperature Electrospray Ionization for Temperature-Dependent Folding/Refolding Reactions of Proteins and Ligand Binding.

Jacob W McCabe1, Mehdi Shirzadeh1, Thomas E Walker1, Cheng-Wei Lin1, Benjamin J Jones2, Vicki H Wysocki2, David P Barondeau1, David E Clemmer3, Arthur Laganowsky1, David H Russell1.   

Abstract

Stabilities and structure(s) of proteins are directly coupled to their local environment or Gibbs free energy landscape as defined by solvent, temperature, pressure, and concentration. Solution pH, ionic strength, cofactors, chemical chaperones, and osmolytes perturb the chemical potential and induce further changes in structure, stability, and function. At present, no single analytical technique can monitor these effects in a single measurement. Mass spectrometry and ion mobility-mass spectrometry play increasingly essential roles in studies of proteins, protein complexes, and even membrane protein complexes; however, with few exceptions, the effects of the solution temperature on the stability and structure(s) of analytes have not been thoroughly investigated. Here, we describe a new variable-temperature electrospray ionization (vT-ESI) source that utilizes a thermoelectric chip to cool and heat the solution contained within the static ESI emitter. This design allows for solution temperatures to be varied from ∼5 to 98 °C with short equilibration times (<2 min) between precisely controlled temperature changes. The performance of the apparatus for vT-ESI-mass spectrometry and vT-ESI-ion mobility-mass spectrometry studies of cold- and heat-folding reactions is demonstrated using ubiquitin and frataxin. Instrument performance for studies on temperature-dependent ligand binding is shown using the chaperonin GroEL.

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Year:  2021        PMID: 33904705      PMCID: PMC8119373          DOI: 10.1021/acs.analchem.1c00870

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  68 in total

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Review 2.  GroEL-mediated protein folding: making the impossible, possible.

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Review 5.  The role of circular dichroism spectroscopy in the era of integrative structural biology.

Authors:  B A Wallace
Journal:  Curr Opin Struct Biol       Date:  2019-05-08       Impact factor: 6.809

6.  First-Principles Collision Cross Section Measurements of Large Proteins and Protein Complexes.

Authors:  Jacob W McCabe; Christopher S Mallis; Klaudia I Kocurek; Michael L Poltash; Mehdi Shirzadeh; Michael J Hebert; Liqi Fan; Thomas E Walker; Xueyun Zheng; Ting Jiang; Shiyu Dong; Cheng-Wei Lin; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2020-07-28       Impact factor: 6.986

7.  Cis→Trans Isomerization of Pro(7) in Oxytocin Regulates Zn(2+) Binding.

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Journal:  J Am Soc Mass Spectrom       Date:  2016-05-06       Impact factor: 3.109

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9.  Substance P in the Gas Phase: Conformational Changes and Dissociations Induced by Collisional Activation in a Drift Tube.

Authors:  Christopher R Conant; Daniel R Fuller; Zhichao Zhang; Daniel W Woodall; David H Russell; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2019-04-12       Impact factor: 3.109

10.  Characterizing intermediates along the transition from polyproline I to polyproline II using ion mobility spectrometry-mass spectrometry.

Authors:  Liuqing Shi; Alison E Holliday; Huilin Shi; Feifei Zhu; Michael A Ewing; David H Russell; David E Clemmer
Journal:  J Am Chem Soc       Date:  2014-08-27       Impact factor: 15.419

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  7 in total

1.  Entropy in the Molecular Recognition of Membrane Protein-Lipid Interactions.

Authors:  Pei Qiao; Samantha Schrecke; Thomas Walker; Jacob W McCabe; Jixing Lyu; Yun Zhu; Tianqi Zhang; Smriti Kumar; David Clemmer; David H Russell; Arthur Laganowsky
Journal:  J Phys Chem Lett       Date:  2021-12-20       Impact factor: 6.475

2.  Symmetry of 4-Oxalocrotonate Tautomerase Trimers Influences Unfolding and Fragmentation in the Gas Phase.

Authors:  Sarah N Sipe; Emily B Lancaster; Jamie P Butalewicz; Christian P Whitman; Jennifer S Brodbelt
Journal:  J Am Chem Soc       Date:  2022-06-29       Impact factor: 16.383

3.  Implementing Digital-Waveform Technology for Extended m/z Range Operation on a Native Dual-Quadrupole FT-IM-Orbitrap Mass Spectrometer.

Authors:  Jacob W McCabe; Benjamin J Jones; Thomas E Walker; Robert L Schrader; Adam P Huntley; Jixing Lyu; Nathan M Hoffman; Gordon A Anderson; Peter T A Reilly; Arthur Laganowsky; Vicki H Wysocki; David H Russell
Journal:  J Am Soc Mass Spectrom       Date:  2021-11-19       Impact factor: 3.262

Review 4.  Mass Spectrometry Methods for Measuring Protein Stability.

Authors:  Daniel D Vallejo; Carolina Rojas Ramírez; Kristine F Parson; Yilin Han; Varun V Gadkari; Brandon T Ruotolo
Journal:  Chem Rev       Date:  2022-03-22       Impact factor: 72.087

5.  Temperature Regulates Stability, Ligand Binding (Mg2+ and ATP), and Stoichiometry of GroEL-GroES Complexes.

Authors:  Thomas E Walker; Mehdi Shirzadeh; He Mirabel Sun; Jacob W McCabe; Andrew Roth; Zahra Moghadamchargari; David E Clemmer; Arthur Laganowsky; Hays Rye; David H Russell
Journal:  J Am Chem Soc       Date:  2022-02-02       Impact factor: 15.419

Review 6.  Temperature-Controlled Electrospray Ionization: Recent Progress and Applications.

Authors:  Julian Alexander Harrison; Adam Pruška; Irina Oganesyan; Philipp Bittner; Renato Zenobi
Journal:  Chemistry       Date:  2021-11-05       Impact factor: 5.020

7.  Synchronized Stepped Frequency Modulation for Multiplexed Ion Mobility Measurements.

Authors:  Elvin R Cabrera; Brian H Clowers
Journal:  J Am Soc Mass Spectrom       Date:  2022-02-02       Impact factor: 3.262

  7 in total

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