Literature DB >> 28232526

Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability.

Pascal Leuenberger1,2, Stefan Ganscha2,3, Abdullah Kahraman4, Valentina Cappelletti1, Paul J Boersema1, Christian von Mering4, Manfred Claassen3, Paola Picotti5.   

Abstract

Temperature-induced cell death is thought to be due to protein denaturation, but the determinants of thermal sensitivity of proteomes remain largely uncharacterized. We developed a structural proteomic strategy to measure protein thermostability on a proteome-wide scale and with domain-level resolution. We applied it to Escherichia coli, Saccharomyces cerevisiae, Thermus thermophilus, and human cells, yielding thermostability data for more than 8000 proteins. Our results (i) indicate that temperature-induced cellular collapse is due to the loss of a subset of proteins with key functions, (ii) shed light on the evolutionary conservation of protein and domain stability, and (iii) suggest that natively disordered proteins in a cell are less prevalent than predicted and (iv) that highly expressed proteins are stable because they are designed to tolerate translational errors that would lead to the accumulation of toxic misfolded species.
Copyright © 2017, American Association for the Advancement of Science.

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Year:  2017        PMID: 28232526     DOI: 10.1126/science.aai7825

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  101 in total

1.  Proteome-wide Analysis of Protein Thermal Stability in the Model Higher Plant Arabidopsis thaliana.

Authors:  Jeremy D Volkening; Kelly E Stecker; Michael R Sussman
Journal:  Mol Cell Proteomics       Date:  2018-11-06       Impact factor: 5.911

2.  Kinetic versus thermodynamic control of mutational effects on protein homeostasis: A perspective from computational modeling and experiment.

Authors:  Kristine Faye R Pobre; David L Powers; Kingshuk Ghosh; Lila M Gierasch; Evan T Powers
Journal:  Protein Sci       Date:  2019-05-24       Impact factor: 6.725

3.  Protein Melting Temperature Cannot Fully Assess Whether Protein Folding Free Energy Underlies the Universal Abundance-Evolutionary Rate Correlation Seen in Proteins.

Authors:  Rostam M Razban
Journal:  Mol Biol Evol       Date:  2019-09-01       Impact factor: 16.240

4.  Plant-Scale Validation of Physical Heat Treatment of Poultry Litter Composts Using Surrogate and Indicator Microorganisms for Salmonella.

Authors:  Hongye Wang; Zhao Chen; Muthu Dharmasena; Annel K Greene; Brian McSpadden Gardener; Blaize Holden; Xiuping Jiang
Journal:  Appl Environ Microbiol       Date:  2020-12-18       Impact factor: 4.792

5.  Mutant thermal proteome profiling for characterization of missense protein variants and their associated phenotypes within the proteome.

Authors:  Sarah A Peck Justice; Monica P Barron; Guihong D Qi; H R Sagara Wijeratne; José F Victorino; Ed R Simpson; Jonah Z Vilseck; Aruna B Wijeratne; Amber L Mosley
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

6.  Structural Analysis of the Effect of a Dual-FLAG Tag on Transthyretin.

Authors:  Mehdi Shirzadeh; Michael L Poltash; Arthur Laganowsky; David H Russell
Journal:  Biochemistry       Date:  2020-03-02       Impact factor: 3.162

7.  Multiple proteolytic events in caspase-6 self-activation impact conformations of discrete structural regions.

Authors:  Kevin B Dagbay; Jeanne A Hardy
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-01       Impact factor: 11.205

8.  Meltome atlas-thermal proteome stability across the tree of life.

Authors:  Anna Jarzab; Nils Kurzawa; Thomas Hopf; Matthias Moerch; Jana Zecha; Niels Leijten; Yangyang Bian; Eva Musiol; Melanie Maschberger; Gabriele Stoehr; Isabelle Becher; Charlotte Daly; Patroklos Samaras; Julia Mergner; Britta Spanier; Angel Angelov; Thilo Werner; Marcus Bantscheff; Mathias Wilhelm; Martin Klingenspor; Simone Lemeer; Wolfgang Liebl; Hannes Hahne; Mikhail M Savitski; Bernhard Kuster
Journal:  Nat Methods       Date:  2020-04-13       Impact factor: 28.547

9.  PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer.

Authors:  Xingcheng Lin; Susmita Roy; Mohit Kumar Jolly; Federico Bocci; Nicholas P Schafer; Min-Yeh Tsai; Yihong Chen; Yanan He; Alexander Grishaev; Keith Weninger; John Orban; Prakash Kulkarni; Govindan Rangarajan; Herbert Levine; José N Onuchic
Journal:  J Mol Biol       Date:  2018-06-05       Impact factor: 5.469

Review 10.  Chemical Biology Framework to Illuminate Proteostasis.

Authors:  Rebecca M Sebastian; Matthew D Shoulders
Journal:  Annu Rev Biochem       Date:  2020-02-25       Impact factor: 23.643

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