Literature DB >> 32560586

Following Structural Changes by Thermal Denaturation Using Trapped Ion Mobility Spectrometry-Mass Spectrometry.

Kevin Jeanne Dit Fouque1, Francisco Fernandez-Lima1,2.   

Abstract

The behavior of biomolecules as a function of the solution temperature is often crucial to assessing their biological activity and function. While heat-induced changes of biomolecules are traditionally monitored using optical spectroscopy methods, their conformational changes and unfolding transitions remain challenging to interpret. In the present work, the structural transitions of bovine serum albumin (BSA) in native conditions (100 mM aqueous ammonium acetate) were investigated as a function of the starting solution temperature (T ∼ 23-70 °C) using a temperature-controlled nanoelectrospray ionization source (nESI) coupled to a trapped ion mobility spectrometry-mass spectrometry (TIMS-MS) instrument. The charge state distribution of the monomeric BSA changed from a native-like, narrow charge state ([M + 12H]12+ to [M + 16H]16+ at ∼23 °C) and narrow mobility distribution toward an unfolded-like, broad charge state (up to [M + 46H]46+ at ∼70 °C) and broad mobility distribution. Inspection of the average charge state and collision cross section (CCS) distribution suggested a two-state unfolding transition with a melting temperature Tm ∼ 56 ± 1 °C; however, the inspection of the CCS profiles at the charge state level as a function of the solution temperature showcases at least six structural transitions (T1-T7). If the starting solution concentration is slightly increased (from 2 to 25 μM), this method can detect nonspecific BSA dimers and trimers which dissociate early (Td ∼ 34 ± 1 °C) and may disturb the melting curve of the BSA monomer. In a single experiment, this technology provides a detailed view of the solution, protein structural landscape (mobility vs solution temperature vs relative intensity for each charge state).

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Year:  2020        PMID: 32560586      PMCID: PMC8341290          DOI: 10.1021/acs.jpcb.0c04276

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  52 in total

1.  Determination of protein-ligand association thermochemistry using variable-temperature nanoelectrospray mass spectrometry.

Authors:  Rambod Daneshfar; Elena N Kitova; John S Klassen
Journal:  J Am Chem Soc       Date:  2004-04-21       Impact factor: 15.419

2.  Measurement of protein stability and protein denaturation in cells using differential scanning calorimetry.

Authors:  James R Lepock
Journal:  Methods       Date:  2004-12-19       Impact factor: 3.608

3.  Using circular dichroism collected as a function of temperature to determine the thermodynamics of protein unfolding and binding interactions.

Authors:  Norma J Greenfield
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

4.  Monitoring protein folding and unfolding pathways through surface hydrophobicity changes using fluorescence and circular dichroism spectroscopy.

Authors:  J Lamba; S Paul; V Hasija; R Aggarwal; T K Chaudhuri
Journal:  Biochemistry (Mosc)       Date:  2009-04       Impact factor: 2.487

5.  Partially disordered proteins studied by ion mobility-mass spectrometry: implications for the preservation of solution phase structure in the gas phase.

Authors:  Siavash Vahidi; Bradley B Stocks; Lars Konermann
Journal:  Anal Chem       Date:  2013-10-21       Impact factor: 6.986

6.  Direct monitoring of heat-stressed biopolymers with temperature-controlled electrospray ionization mass spectrometry.

Authors:  Guanbo Wang; Rinat R Abzalimov; Igor A Kaltashov
Journal:  Anal Chem       Date:  2011-03-23       Impact factor: 6.986

7.  Distinguishing Loss of Structure from Subunit Dissociation for Protein Complexes with Variable Temperature Ion Mobility Mass Spectrometry.

Authors:  Kamila J Pacholarz; Perdita E Barran
Journal:  Anal Chem       Date:  2015-06-03       Impact factor: 6.986

8.  Exploring the Conformational Space of Growth-Hormone-Releasing Hormone Analogues Using Dopant Assisted Trapped Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Kevin Jeanne Dit Fouque; Javier Moreno; Francisco Fernandez-Lima
Journal:  J Phys Chem B       Date:  2019-07-12       Impact factor: 2.991

9.  Dynamics of the E. coli β-Clamp Dimer Interface and Its Influence on DNA Loading.

Authors:  Bilyana N Koleva; Hatice Gokcan; Alessandro A Rizzo; Socheata Lim; Kevin Jeanne Dit Fouque; Angelina Choy; Melissa L Liriano; Francisco Fernandez-Lima; Dmitry M Korzhnev; G Andrés Cisneros; Penny J Beuning
Journal:  Biophys J       Date:  2019-07-05       Impact factor: 4.033

10.  Using fluorescence correlation spectroscopy to study conformational changes in denatured proteins.

Authors:  Eilon Sherman; Anna Itkin; Yosef Yehuda Kuttner; Elizabeth Rhoades; Dan Amir; Elisha Haas; Gilad Haran
Journal:  Biophys J       Date:  2008-03-07       Impact factor: 4.033

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  3 in total

1.  Trapped Ion Mobility Spectrometry of Native Macromolecular Assemblies.

Authors:  Kevin Jeanne Dit Fouque; Alyssa Garabedian; Fenfei Leng; Yuk-Ching Tse-Dinh; Mark E Ridgeway; Melvin A Park; Francisco Fernandez-Lima
Journal:  Anal Chem       Date:  2021-01-25       Impact factor: 6.986

2.  Thermal Analysis of a Mixture of Ribosomal Proteins by vT-ESI-MS: Toward a Parallel Approach for Characterizing the Stabilitome.

Authors:  Tarick J El-Baba; Shannon A Raab; Rachel P Buckley; Christopher J Brown; Corinne A Lutomski; Lucas W Henderson; Daniel W Woodall; Jiangchuan Shen; Jonathan C Trinidad; Hengyao Niu; Martin F Jarrold; David H Russell; Arthur Laganowsky; David E Clemmer
Journal:  Anal Chem       Date:  2021-06-08       Impact factor: 8.008

Review 3.  Temperature-Controlled Electrospray Ionization: Recent Progress and Applications.

Authors:  Julian Alexander Harrison; Adam Pruška; Irina Oganesyan; Philipp Bittner; Renato Zenobi
Journal:  Chemistry       Date:  2021-11-05       Impact factor: 5.020

  3 in total

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