Literature DB >> 34932911

Variable-Temperature Native Mass Spectrometry for Studies of Protein Folding, Stabilities, Assembly, and Molecular Interactions.

Arthur Laganowsky1, David E Clemmer2, David H Russell1.   

Abstract

The structures and conformational dynamics of proteins, protein complexes, and their noncovalent interactions with other molecules are controlled specifically by the Gibbs free energy (entropy and enthalpy) of the system. For some organisms, temperature is highly regulated, but the majority of biophysical studies are carried out at room, nonphysiological temperature. In this review, we describe variable-temperature electrospray ionization (vT-ESI) mass spectrometry (MS)-based studies with unparalleled sensitivity, dynamic range, and selectivity for studies of both cold- and heat-induced chemical processes. Such studies provide direct determinations of stabilities, reactivities, and thermodynamic measurements for native and non-native structures of proteins and protein complexes and for protein-ligand interactions. Highlighted in this review are vT-ESI-MS studies that reveal 40 different conformers of chymotrypsin inhibitor 2, a classic two-state (native → unfolded) unfolder, and thermochemistry for a model membrane protein system binding lipid and its regulatory protein.

Entities:  

Keywords:  native mass spectrometry; protein folding; protein–ligand interactions; thermodynamics; variable-temperature electrospray ionization

Mesh:

Substances:

Year:  2021        PMID: 34932911      PMCID: PMC9086101          DOI: 10.1146/annurev-biophys-102221-101121

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   19.763


  70 in total

1.  Structural stability from solution to the gas phase: native solution structure of ubiquitin survives analysis in a solvent-free ion mobility-mass spectrometry environment.

Authors:  Thomas Wyttenbach; Michael T Bowers
Journal:  J Phys Chem B       Date:  2011-09-30       Impact factor: 2.991

2.  Entropy in molecular recognition by proteins.

Authors:  José A Caro; Kyle W Harpole; Vignesh Kasinath; Jackwee Lim; Jeffrey Granja; Kathleen G Valentine; Kim A Sharp; A Joshua Wand
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-05       Impact factor: 11.205

3.  Molecular Mechanism of ISC Iron-Sulfur Cluster Biogenesis Revealed by High-Resolution Native Mass Spectrometry.

Authors:  Cheng-Wei Lin; Jacob W McCabe; David H Russell; David P Barondeau
Journal:  J Am Chem Soc       Date:  2020-03-17       Impact factor: 15.419

4.  Melting proteins confined in nanodroplets with 10.6 μm light provides clues about early steps of denaturation.

Authors:  Tarick J El-Baba; Daniel R Fuller; Daniel W Woodall; Shannon A Raab; Christopher R Conant; Jonathan M Dilger; Yoni Toker; Evan R Williams; David H Russell; David E Clemmer
Journal:  Chem Commun (Camb)       Date:  2018-03-27       Impact factor: 6.222

5.  Conformationally Regulated Peptide Bond Cleavage in Bradykinin.

Authors:  Daniel R Fuller; Christopher R Conant; Tarick J El-Baba; Christopher J Brown; Daniel W Woodall; David H Russell; David E Clemmer
Journal:  J Am Chem Soc       Date:  2018-07-23       Impact factor: 15.419

6.  Intrinsic GTPase Activity of K-RAS Monitored by Native Mass Spectrometry.

Authors:  Zahra Moghadamchargari; Jamison Huddleston; Mehdi Shirzadeh; Xueyun Zheng; David E Clemmer; Frank M Raushel; David H Russell; Arthur Laganowsky
Journal:  Biochemistry       Date:  2019-07-22       Impact factor: 3.162

7.  Topological Analysis of Transthyretin Disassembly Mechanism: Surface-Induced Dissociation Reveals Hidden Reaction Pathways.

Authors:  Mehdi Shirzadeh; Christopher D Boone; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2019-01-28       Impact factor: 6.986

8.  Solution thermochemistry of concanavalin A tetramer conformers measured by variable-temperature ESI-IMS-MS.

Authors:  Tarick J El-Baba; David E Clemmer
Journal:  Int J Mass Spectrom       Date:  2019-06-15       Impact factor: 1.986

Review 9.  Targeting RAS signalling pathways in cancer therapy.

Authors:  Julian Downward
Journal:  Nat Rev Cancer       Date:  2003-01       Impact factor: 60.716

10.  Evidence for two new solution states of ubiquitin by IMS-MS analysis.

Authors:  Huilin Shi; David E Clemmer
Journal:  J Phys Chem B       Date:  2014-03-24       Impact factor: 2.991

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  1 in total

1.  Cupric Ions Selectively Modulate TRAAK-Phosphatidylserine Interactions.

Authors:  Yun Zhu; Samantha Schrecke; Shuli Tang; Melanie T Odenkirk; Thomas Walker; Lauren Stover; Jixing Lyu; Tianqi Zhang; David Russell; Erin S Baker; Xin Yan; Arthur Laganowsky
Journal:  J Am Chem Soc       Date:  2022-04-14       Impact factor: 16.383

  1 in total

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