Literature DB >> 31650016

The Sant Pau Initiative on Neurodegeneration (SPIN) cohort: A data set for biomarker discovery and validation in neurodegenerative disorders.

Daniel Alcolea1,2, Jordi Clarimón1,2, María Carmona-Iragui1,2,3, Ignacio Illán-Gala1,2, Estrella Morenas-Rodríguez1,2, Isabel Barroeta1,2, Roser Ribosa-Nogué1,2, Isabel Sala1,2, M Belén Sánchez-Saudinós1,2, Laura Videla1,2,3, Andrea Subirana1,2, Bessy Benejam1,2,3, Sílvia Valldeneu1,2, Susana Fernández1,2,3, Teresa Estellés1,2, Miren Altuna1,2, Miguel Santos-Santos1,2, Lídia García-Losada1,2, Alexandre Bejanin1,2, Jordi Pegueroles1,2, Víctor Montal1,2, Eduard Vilaplana1,2, Olivia Belbin1,2, Oriol Dols-Icardo1,2, Sònia Sirisi1,2, Marta Querol-Vilaseca1,2, Laura Cervera-Carles1,2, Laia Muñoz1,2, Raúl Núñez1,2, Soraya Torres1,2, M Valle Camacho4, Ignasi Carrió4, Sandra Giménez5, Constance Delaby1,6, Ricard Rojas-Garcia7,8, Janina Turon-Sans7,8, Javier Pagonabarraga2,9, Amanda Jiménez10, Rafael Blesa1,2, Juan Fortea1,2,3, Alberto Lleó1,2.   

Abstract

INTRODUCTION: The SPIN (Sant Pau Initiative on Neurodegeneration) cohort is a multimodal biomarker platform designed for neurodegenerative disease research following an integrative approach.
METHODS: Participants of the SPIN cohort provide informed consent to donate blood and cerebrospinal fluid samples, receive detailed neurological and neuropsychological evaluations, and undergo a structural 3T brain MRI scan. A subset also undergoes other functional or imaging studies (video-polysomnogram, 18F-fluorodeoxyglucose PET, amyloid PET, Tau PET). Participants are followed annually for a minimum of 4 years, with repeated cerebrospinal fluid collection and imaging studies performed every other year, and brain donation is encouraged.
RESULTS: The integration of clinical, neuropsychological, genetic, biochemical, imaging, and neuropathological information and the harmonization of protocols under the same umbrella allows the discovery and validation of key biomarkers across several neurodegenerative diseases. DISCUSSION: We describe our particular 10-year experience and how different research projects were unified under an umbrella biomarker program, which might be of help to other research teams pursuing similar approaches.
© 2019 The Authors.

Entities:  

Keywords:  Alzheimer's disease; Biomarkers; Dementia with Lewy bodies; Frontontemporal dementia; Neurodegeneration; Neuroimaging

Year:  2019        PMID: 31650016      PMCID: PMC6804606          DOI: 10.1016/j.trci.2019.09.005

Source DB:  PubMed          Journal:  Alzheimers Dement (N Y)        ISSN: 2352-8737


Background

Biomarkers have revolutionized our conceptualization of neurodegenerative diseases. In recent years, advances in the field of biomarkers have been instrumental in understanding the neurobiology underlying these disorders. Currently, biomarkers are essential to define the long preclinical stages, to achieve early diagnosis, to improve the selection of participants in clinical trials and to monitor the effect of drugs targeted to specific pathological pathways [1], [2]. In the Sant Pau Memory Unit, as in many other teams specialized in neurodegenerative diseases, we have progressively adapted our clinical routine and research programs to incorporate the different biomarkers that are developed in the field. In this article, we describe our particular experience with this process and how the different research projects were unified under an umbrella biomarker program, which might be of help to other research teams pursuing similar approaches. The Sant Pau Memory Unit is part of the Neurology Department at the Hospital de la Santa Creu i Sant Pau, a tertiary center that offers medical care to an area in Barcelona of approximately 400,000 inhabitants. In addition, the Unit is a referral center for complex or atypical cases around the Catalonia region. The Sant Pau Memory Unit attends patients with cognitive or behavioral symptoms referred either by their primary care physician or by other neurologists to receive specialized diagnosis and treatment and/or to facilitate their participation in research protocols. Patients receive a standard initial medical visit by one of our faculty or fellow neurologists. Our initial visit consists of an extensive medical history revision, physical examination, and the administration of brief tests and questionnaires to assess cognition and functional impact in daily living activities. In most cases, in particular when cognitive impairment is not evident, a formal 1-hour cognitive evaluation by a neuropsychologist is scheduled, and sometimes, especially in patients with a suspected frontotemporal lobar degeneration–related syndrome or an atypical Alzheimer's disease (AD) syndrome, a specialized 2-hour additional visit helps to refine their clinical diagnosis. Neuroimaging and blood tests are also usually scheduled if they have not been previously ordered by their referral physician. In 2009, the clinical protocol was refined and cerebrospinal fluid (CSF) biomarkers were integrated to improve the early detection of prodromal AD. This approach facilitates the implementation of disease-modifying drugs that are currently under investigation in phase 2 or phase 3 clinical trials. After the completion of these tests, a follow-up visit is scheduled where results are discussed, diagnosis is disclosed, and an appropriate treatment is prescribed, if necessary. Patients and/or caregivers, usually receive an appointment with a nurse to enhance the understanding of treatment posology and eventually to clarify other medical, legal, or social aspects related to the disease. As shown in Fig. 1, once the standard care has been ensured, most patients are invited to participate in research, either by enrolling in clinical trials involving new investigational drugs or in any of our observational research studies. Clinical trials are managed by a specific research team composed of neurologists, neuropsychologists, a research nurse, and a data manager. This team reviews inclusion/exclusion criteria and organizes follow-up appointments and drug administration according to each specific trial protocol. Participants of our observational studies, on the other hand, may receive ancillary biomarker and/or imaging tests and a specialized additional visit where supplementary questionnaires and cognitive/behavioral scales are administered. Our observational research studies include different neurodegenerative conditions and were recently reorganized under a global umbrella study named SPIN (Sant Pau Initiative on Neurodegeneration).
Fig. 1

Flow-chart of clinical practice and research protocols in the Sant Pau Memory Unit.

Flow-chart of clinical practice and research protocols in the Sant Pau Memory Unit.

Methods

The SPIN cohort: General protocol

The SPIN cohort study was launched in 2011 as an umbrella program with the aim of grouping individual clinical observational studies performed in the Sant Pau Memory Unit. The SPIN cohort currently includes cognitively normal participants, patients with subjective cognitive decline, mild cognitive impairment, mild AD dementia, frontotemporal lobar degeneration–related syndromes (FTLD-S), dementia with Lewy bodies (DLB) and Down syndrome (which is treated in a separate section; see DABNI project). Inclusion and exclusion criteria for the SPIN cohort are detailed in Table 1. Patients with FTLD-S are systematically referred to the Motor Neuron Disease Clinic at the Neuromuscular Diseases Unit and evaluated by neurologists experienced in diagnosis and management of motor neuron diseases. A standardized visit is performed focusing on the detection of signs and symptoms suggestive of upper and lower motor neuron involvement. In these patients, an electrophysiological evaluation, including electromyographic concentric needle examination, motor and sensory nerve conduction studies are performed by qualified physicians according to established standards.
Table 1

Inclusion and exclusion criteria for the SPIN cohort

Inclusion criteria
For all participants
18 years or olderSigned informed consent
Cognitively normal controls
No memory complaintsMMSE [27–30]CDR global score = 0FCSRT total immediate score (EAS62) ≥ 7Absence of significant impairment in other domains or in daily living activities.
Subjective cognitive decline
Memory complaints (severe enough to have resulted in a request for medical referral)MMSE [27–30]CDR global score = 0FCSRT total immediate score (EAS62) ≥ 7Absence of significant impairment in other domains or in daily living activities.
Prodromal AD
MMSE [24–30]CDR global score = 0.5Absence of a clinical diagnosis of dementiaCSF biomarkers supporting AD pathophysiology
Typical AD dementia
CDR global score ≥ 0.5FCSRT total immediate score (EAS62) ≤ 6Clinical criteria of “probable AD dementia with evidence of the AD pathophysiological process” [59]
Dementia with Lewy bodies
Lewy body dementia: probable Lewy body dementia [60] or Lewy body mild cognitive impairment: Mild cognitive impairment [61] AND one or more of:

Visual hallucinations

Parkinsonism

REM sleep behavior disorder

Cognitive fluctuations [62]

Frontotemporal lobar degenerationrelated syndromes (FTLD-S)
Possible, probable, or definitive behavioral variant of frontotemporal dementia [63]Semantic variant of primary progressive aphasia [64]Nonfluent/agrammatic variant of primary progressive aphasia [64]Corticobasal syndrome [65]Progressive supranuclear palsy syndromes [66], [67]Any of the clinical diagnoses along the amyotrophic lateral sclerosis–frontotemporal dementia (ALS-FTD) continuum [68], [69]
Down syndrome
Presence of trisomy at chromosome 21
Exclusion criteria

Inability to complete neuropsychological tests and questionnaires (illiteracy, blindness, hearing impairment)

Contraindication for MRI (claustrophobia, pacemaker, aneurism clips, cardiac mechanical valve)

Contraindication for lumbar puncture (anticoagulation, coagulation disease): Must not be taking anticoagulant treatment such as acenocoumarol, heparin, warfarin, dabigatran, rivaroxaban, apixaban

Current treatment with drugs that can impair cognition

Medical history of:

Neurological disease (stroke, brain lesions, epilepsy)

Psychiatric disease (psychosis or major depression)

Drug abuse in the last year

Medical history of cancer is an exclusion criterion when:

It affects the central nervous system

It has not been in complete remission for 5 years or longer

Patient has received potentially neurotoxic chemotherapy

Patient has received cranial radiotherapy

Abbreviations: AD, Alzheimer's disease; CSF, cerebrospinal fluid; EAS62, education-adjusted score at the age of 62 years [70]; MMSE, Mini–Mental State Examination; CDR, Clinical Dementia Rating; FCSRT, Free and Cued Selective Reminding Test; SPIN, Sant Pau Initiative on Neurodegeneration.

Inclusion and exclusion criteria for the SPIN cohort Visual hallucinations Parkinsonism REM sleep behavior disorder Cognitive fluctuations [62] Inability to complete neuropsychological tests and questionnaires (illiteracy, blindness, hearing impairment) Contraindication for MRI (claustrophobia, pacemaker, aneurism clips, cardiac mechanical valve) Contraindication for lumbar puncture (anticoagulation, coagulation disease): Must not be taking anticoagulant treatment such as acenocoumarol, heparin, warfarin, dabigatran, rivaroxaban, apixaban Current treatment with drugs that can impair cognition Medical history of: Neurological disease (stroke, brain lesions, epilepsy) Psychiatric disease (psychosis or major depression) Drug abuse in the last year Medical history of cancer is an exclusion criterion when: It affects the central nervous system It has not been in complete remission for 5 years or longer Patient has received potentially neurotoxic chemotherapy Patient has received cranial radiotherapy Abbreviations: AD, Alzheimer's disease; CSF, cerebrospinal fluid; EAS62, education-adjusted score at the age of 62 years [70]; MMSE, Mini–Mental State Examination; CDR, Clinical Dementia Rating; FCSRT, Free and Cued Selective Reminding Test; SPIN, Sant Pau Initiative on Neurodegeneration. As the primary objective of the SPIN cohort is biomarker discovery and validation, consent for blood and CSF collection is required for all participants. Detailed neurological and neuropsychological evaluation and a structural 3T brain MRI are also necessary for inclusion. As shown in Fig. 2, a subset of participants receive a video-polysomnogram and/or imaging tests that involve radiotracers, such as 18F-fluorodeoxyglucose (18FDG), amyloid or Tau PET. Participants are followed on an annual basis for a minimum of 4 years, and we offer the possibility to repeat imaging and/or CSF studies every two years.
Fig. 2

General protocol in the SPIN cohort. Abbreviations: SPIN, Sant Pau Initiative on Neurodegeneration.

General protocol in the SPIN cohort. Abbreviations: SPIN, Sant Pau Initiative on Neurodegeneration.

Cognitively normal volunteers

Asymptomatic volunteers are an extremely relevant group in the SPIN cohort. Volunteers are usually spouses or children of patients that are informed about our studies at the outpatient clinics of the Sant Pau Memory Unit. Volunteers can also learn about our projects through talks, our website (https://santpaumemoryunit.com) or social media (@SantPauMemory). All volunteers receive an initial consultation with a neurologist in which the SPIN protocol is explained in detail, inclusion/exclusion criteria are reviewed and informed consent is signed. As in other observational studies, the SPIN cohort has a blinded design and biomarker results are not disclosed to volunteers unless clinically relevant or in case the participant becomes eligible for pharmacological prevention clinical trials. On the first day, a neurologist and a neuropsychologist perform a full medical history review, physical examination, and a standard neuropsychological evaluation (Table 2) followed by a lumbar puncture and blood extraction. Neuroimaging studies might be scheduled on different days.
Table 2

Clinical and neuropsychological evaluation protocols

Standard neuropsychological evaluation
Screening tests
 Mini–Mental State Examination [71], [72]
 Memory Alteration Test [73]
Episodic verbal memory
 Free and Cued Selective Reminding Test (FCSRT) [70], [74]
 Consortium to Establish a Registry for Alzheimer's Disease (CERAD) word list [75]
Visual memory
 Complex Rey Figure Recall [70], [76], [77]
 Geometric Figures recall from the Consortium to Establish a Registry for Alzheimer's Disease or CERAD battery [75]
Attention/executive functions
 Phonemic verbal fluency test [78], [79]
 Trail-Making test form A and B [80]
 WAIS Direct and Reverse Digit span [80]
 Clock Drawing Task on command [81]
Language
 Boston naming test [82], [83]
 Consortium to Establish a Registry for Alzheimer's Disease or CERAD battery (orders comprehension) [75], [84]
 Semantic verbal fluency [78], [79]
Visuospatial/visuopercetpive/visuoconstructional functioning
 Geometric figures copy subtest of CERAD
 Number location subtest from the Visual Object Space and Perception (VOSP) battery [85]
 Poppelreuter overlapping figures test [86]
Neuropsychiatric symptoms
 Neuropsychiatric inventory [87]
 Geriatric depression scale [88]
Functional assessment
 Interview for deterioration in daily living in dementia [89]
Global cognitive impairment
 Global deterioration scale [90]
 Clinical dementia rating [91]
 FTLD-specific Clinical Dementia Rating [92]

Abbreviations: ALS-FTD, amyotrophic lateral sclerosis–frontotemporal dementia; FTLD-S, frontotemporal lobar degeneration–related syndromes; CATFI, Catalan Initiative for Frontotemporal Dementia; UPDRS-III, Unified Parkinson's Disease Rating Scale, Part III (motor examination).

Tests that assess episodic verbal memory are administered sequentially separated by a nonverbal interference task.

Clinical and neuropsychological evaluation protocols Abbreviations: ALS-FTD, amyotrophic lateral sclerosis–frontotemporal dementia; FTLD-S, frontotemporal lobar degeneration–related syndromes; CATFI, Catalan Initiative for Frontotemporal Dementia; UPDRS-III, Unified Parkinson's Disease Rating Scale, Part III (motor examination). Tests that assess episodic verbal memory are administered sequentially separated by a nonverbal interference task. To minimize the impact of the study on volunteers' routine, all participants can choose how they prefer to be informed of the results, either by post, email, or by scheduling an extra on-site appointment. Those participants whose neuropsychological evaluation, biochemical analysis, or neuroimaging studies show clinically relevant abnormal results are scheduled for an on-site consultation to discuss these results. Cognitively normal participants are contacted annually for a minimum of 4 years, and they are invited to repeat neuropsychological, imaging, and CSF studies every two years.

Ethical aspects

At the moment of inclusion in our observational studies, the details of the protocol are explained, and verbal and signed informed consent is obtained from all participants. We specifically ask all participants for their consent to the acquisition, analysis, and storage of biological samples. They are also informed about the possibility of sharing anonymized information and/or biological samples with other researchers, which is requested in an independent consent form. The original protocol and the subsequent amendments were approved by our local ethics committee. The SPIN cohort is based on blinded enrollment and only clinically relevant biomarker results are disclosed.

Neuropsychological evaluation

All participants in the SPIN cohort receive a standard one-hour neuropsychological evaluation to assess episodic verbal memory, visual memory, attention, executive functions, visuospatial, visuoperceptive and visuoconstructive functioning and language. Neuropsychiatric symptoms, functional impact, and the level of global cognitive impairment are also assessed. Table 2 lists all tests included in our standard neuropsychological evaluation [3]. Our standard protocol includes two verbal memory tests that are sequentially administered to maximize the detection of prodromal AD: the Free and Cued Selective Reminding Test (FCSRT) and, after a nonverbal interference task, the Consortium to Establish a Registry for Alzheimer's Disease (CERAD) word list when the former is within normal range. We have found that the combination of these two tests can improve the early detection of AD and define prognostic profiles in mild cognitive impairment [3]. Participants with a diagnosis of DLB or FTLD-S receive an additional neuropsychological evaluation to further investigate cognitive functions that are particularly impaired in these disorders, such as visuoperceptive functions and fluctuations in DLB or language, behavior, and executive functions in FTLD-S (Table 2).

Cerebrospinal fluid

Lumbar puncture for CSF sampling is required for all participants of the SPIN cohort. CSF is collected and processed in polypropylene tubes following international recommendations [4], [5]. The first 2 ml of CSF are transferred to the general laboratory for cell count, and analysis of glucose and protein levels. Another volume of 15-20 ml is transferred to our laboratory where samples are processed and aliquoted within the first two hours after the lumbar puncture. Aliquots are stored at −80°C until analysis. Full protocol for CSF processing is detailed in Fig. 3A.
Fig. 3

Biofluid processing: protocols for cerebrospinal fluid (A) and blood (B).

Biofluid processing: protocols for cerebrospinal fluid (A) and blood (B). Core AD biomarkers (Aβ1-42, t-Tau, and p-Tau) are routinely measured in all participants. Our clinical cutoffs for core AD biomarkers were initially obtained from a group of 70 patients clinically diagnosed with dementia of the Alzheimer type (whose clinical diagnoses were made blind to biomarker results) and 45 age-matched cognitively normal controls. Our internal cutoffs were calculated using ELISA [6], transferred to fully automated platforms and validated in a sample of patients that underwent amyloid PET [7]. Our laboratory participates in the Alzheimer's Association quality control program for CSF biomarkers [8], [9].

Blood and DNA extraction

All participants in the SPIN cohort have blood drawn at the time of lumbar puncture. Fasting is not required before the extraction, but the time from last meal to blood extraction is recorded. All samples are transferred to our laboratory where they are centrifuged and aliquoted within 2 hours after extraction and stored at −80°C until they need to be analyzed. Full protocol for blood processing is detailed in Fig. 3B. DNA is extracted from whole blood samples using the DNeasy® Blood & Tissue kit (Qiagen). APOE genotype is routinely determined for all participants in the SPIN cohort by direct DNA sequencing of exon 4 and visual analysis of the resulting electropherogram is performed to identify the two coding polymorphisms that encode the three possible apoE isoforms. Other genetic studies in the SPIN cohort involve mendelian genes related to neurodegenerative dementias (i.e., PSEN1, PSEN2, APP, C9orf72, MAPT, VCP, etc.), as well as other genes and genomic regions that have been involved in their genetic architecture, such as TREM2 [10], CHCHD10 [11], TUBA4A [12], or the 17q21.31 region around MAPT [13]. High-throughput genotyping and next-generation sequencing technologies are also used in specific studies [14], [15].

Structural, diffusion, and functional MRI

All participants in the SPIN cohort are required to undergo 3T-MRI for structural, diffusion, and resting-state functional MRI. Acquisitions parameters are detailed in Table 3.
Table 3

MRI acquisition parameters for structural, diffusion, and functional MRI

MRI acquisition parameterStructural T1 MRIDiffusion-weighted imaging MRIResting-state functional MRI
ProtocolMPRAGEEcho-planar ImagingEcho-planar Imaging
Repetition Time (ms)8.113,677200
Echo Time (ms)3.76131
Slices1608021
Slice thickness (mm)124 (1 of gap)
Voxel Size (mm)0.94×0.94×0.942×2×22.4×3.3×4
Specific Parameters-Single b = 0 image. 32 gradient directions with b = 1000. One inverted phase encoding b = 0190 volumes. Eyes open.

Abbreviation: MPRAGE, magnetization-prepared rapid acquisition with gradient echo.

MRI acquisition parameters for structural, diffusion, and functional MRI Abbreviation: MPRAGE, magnetization-prepared rapid acquisition with gradient echo. Our neuroimaging core takes advantage of surface-based methodologies to process MRI images. Structural MRI is processed using FreeSurfer software package (v6.0; http://surfer.nmr.mgh.harvard.edu) to obtain individuals' cortical reconstruction and cortical thickness maps by using previously described methods [16]. Estimated surfaces are then inspected to detect possible errors in the automatic segmentation procedure, and manual edits are performed to guarantee an accurate cortical segmentation. Diffusion images are processed with a surface-based in-house developed algorithm [17], [18] based on FSL (http://fsl.fmrib.ox.ac.uk/fsl/fslwiki) and FreeSurfer tools. Our pipeline computes cortical diffusivity metrics that allow the evaluation of microstructural changes in the cortex, mitigating some of the pitfalls caused by usual voxel-based methodologies. Resting-state functional MRI studies are processed with an in-house algorithm specifically developed for these sequences [19]. This pipeline admits procedures commonly used in functional imaging studies such as seed analysis and independent component analysis.

Nuclear medicine imaging: 18FDG PET, amyloid PET, Tau PET

Studies with 18FDG PET are acquired in a subset of participants to measure brain metabolism. These studies are visually rated by an expert in nuclear medicine, and images are also processed and quantified by our neuroimaging team. For the whole-brain voxelwise analysis, 18FDG PET images are intensity-scaled by the reference pons-vermis region, spatially normalized using SPM12 (http://www.fil.ion.ucl.ac.uk/spm/) to the Montreal Neurological Institute PET template and spatially smoothed with a Gaussian kernel of full width at half maximum 8 mm. All resulting images are visually inspected to check for possible registration errors. The quantitative analysis of 18FDG uptake in a specific region of interest is performed following the methodology proposed by Landau et al. [20], [21], [22]. Over the past few years, new tracers have been developed to visualize in vivo specific neuropathological aggregates. In the SPIN cohort, amyloid PET studies with 18F-florbetapir have been acquired for a subset of participants, and more recently, we have incorporated 18F-flutemetamol and tau tracers. Images are visually rated by experts in nuclear medicine, and specifically developed semiautomated quantification protocols are applied [7]. Briefly, amyloid PET images are spatially normalized to the subject's T1-MRI and then to the Montreal Neurological Institute 152 template using the individual's anatomical MRI coregistration. Global amyloid PET standardized uptake value ratio scores are estimated averaging frontal, cingulate, parietal, and temporal cortices and using the whole cerebellum as the reference region [23]. In addition to the commonly used analyses in PET using voxel-based and region-based approaches, we have added surface-based methodologies that substantially improve the reliability of PET effects and reduce the intersubject variance.

Sleep evaluation and real-world evidence data

Cognitively normal volunteers in the SPIN cohort and participants with Down syndrome are invited to undergo a full sleep evaluation with subjective and objective measures of the nocturnal sleep and the circadian sleep-wake pattern. This evaluation includes an interview with a sleep specialist, a full nocturnal video-polysomnography, and actigraphy. Participants are requested to track their sleep-wake pattern in sleep diaries and to answer sleep questionnaires designed to assess participants' self-reported sleep quality (Pittsburgh Sleep Quality Index), somnolence (Epworth Sleepiness Scale) and to identify participants at risk for sleep apnea syndrome (Berlin Questionnaire). Video-polysomnography studies are performed in individual, sound-attenuated, temperature-regulated sleep unit rooms under continuous supervision of qualified technical staff. All-night video-polysomnography records information from 19 electroencephalographic channels, two oculographic electrodes, four surface electromyographic channels, and six sensors to monitor respiratory function by assessing oximetry, oronasal airflow, thoracoabdominal movements, and snoring detection. The week before the polysomnography, participants wear an actigraph in the nondominant arm to monitor rest/activity cycles. These portable devices record data on levels of daily activity and light during 24 hours. They provide information about total sleep time and sleep efficiency that can be compared with subjective sleep diary reports and objective polysomnographic data.

Neuropathology

All participants in the SPIN cohort are encouraged to consent for brain donation. In follow-up visits, we stress the importance of neuropathological studies to advance the research of neurodegenerative diseases and suggest all participants contact the Barcelona's Neurological Tissue Bank (http://www.clinicbiobanc.org) for formal registration. Neuropathological validation is a critical issue in multimodal biomarker studies. Brain donation not only allows the confirmation of the diagnosis and the presence of comorbid pathologies but is also necessary to correlate pathological data with CSF or imaging biomarkers [24] and to characterize the underlying biological processes of these biomarkers [25]. Moreover, it is known that secondary pathologies can influence the biomarker signatures [26], [27], and it is important to capture them for their correct interpretation. In our group, we have implemented array tomography microscopy, which is based on obtaining ultrathin (70 nm) consecutive brain sections combined with immunofluorescence [28], [29]. Array tomography requires special fixation conditions, which limits the availability of samples for this type of study. This technique has been previously applied to successfully evidence synaptic abnormalities in AD and, more recently, in DLB [30], [31], [32], [33].

Data integration

One of the strengths of the Sant Pau Memory Unit is that we have integrated clinical, neuropsychological, biomarker, genetic, neuroimaging, and neuropathological information from subjects with different neurodegenerative disorders in one single database. Every participant receives a unique code to integrate all the information. As all data are associated to specific time points for each participant, information from different categories can easily be combined, and automated ready-to-analyze anonymized datasheets can be obtained.

The Down-Alzheimer Barcelona Neuroimaging Initiative: DABNI

The Alzheimer-Down Unit was founded in 2014 as an alliance between the Sant Pau Memory Unit and the Down Syndrome Catalan Foundation. The specific purpose of this Unit, the first of its kind in the world, is the assessment of adults with Down syndrome by medical professionals specialized in dementia for the detection of AD. This multidisciplinary Unit, formed by neurologists, neuropsychologists and social workers, has been recognized by the Catalan government as the reference hospital in Catalonia for the assessment of neurological disorders associated with Down syndrome. Taking advantage of the SPIN cohort structure, the Alzheimer-Down Unit launched a parallel comprehensive biomarker study entitled “Down-Alzheimer Barcelona Neuroimaging Initiative” (DABNI). The aim of the DABNI project is to improve our understanding of the mechanisms that drive AD in Down syndrome (http://fcsd.org/).

Results

Our database includes neuropsychological data of more than 6000 participants, genetics data of more than 3200 participants, more than 2600 blood samples from 2100 participants, and more than 2000 CSF samples from 1700 participants. Neuroimaging information of over 1100 MRI studies, more than 800 FDG-PET and 200 amyloid PET are also incorporated and matched to clinical, neuropsychological, genetic, and biomarker information. CSF samples from the SPIN cohort have contributed to several international multicenter CSF biomarker studies [34], [35], [36], [37], [38]. The SPIN cohort has contributed to the characterization of different CSF biomarkers such as β-site APP-cleaving enzyme activity [39], [40], sAPP-β [6], [39], [41], neurofilament light chain [41], YKL-40 [6], [39], [41], [42], [43], progranulin [44], a panel of synaptic proteins [45], and mitochondrial DNA [46] in different neurodegenerative diseases. In addition, the collection of paired blood and CSF samples offers the possibility to investigate the correlation of biomarker levels between these two compartments [15], [44]. In addition, our DNA repository has been involved in many international studies aimed at identifying the genetic basis of neurodegenerative disorders [47], [48], [49], [50]. Imaging MRI studies acquired in the SPIN cohort have contributed to multicenter collaborative studies [17], [42], [51], and their combination with other biomarkers has yielded relevant results regarding multimodal relationships [41], [42], [44]. Our neuroimaging team has also developed and described novel methods for the detection of longitudinal changes in cortical structure [52] and cortical microstructural changes in diffusion-weighted sequences in AD and FTLD-S [17]. Nuclear medicine imaging studies have also contributed to several international multicenter imaging biomarker initiatives [53], [54], [55], [56], [57]. The incorporation of sleep evaluations in some of the SPIN cohort clinical groups has yielded clinically relevant results. For example, in participants with Down syndrome, questionnaires do not completely reflect sleep disturbances detected on polysomnography, and data acquired by actigraphy might be more sensitive to detect daytime sleep compared with self-reported scales [58]. Access to brain tissue in subjects with antemortem imaging or with biofluid biomarkers also offers the possibility to look into innovative clinical-pathological correlations. The addition of a sophisticated neuropathological quantitative technique such as array tomography microscopy to a multimodal biomarker program has opened the possibility of correlating biomarkers with detailed neuropathological traits. As an example, in the future, we could correlate amyloid load measured by amyloid PET with synaptic densities in different brain regions or a synaptic protein in CSF with synaptic densities postmortem.

Discussion

The organization of the Sant Pau Memory Unit is in many aspects similar to other units across the globe. However, there are some key aspects that are specific to our Unit and that may have been instrumental in achieving certain objectives. First, the current size of our unit (around 35 members) allows daily interaction and collaboration under a manageable environment. Larger organizations tend to divide into smaller groups, hampering daily interaction and limiting the possibilities of collaboration. Also, the research cores, such as genetics, biofluid, imaging, or neuropathology, are developed inside the Unit, which facilitates the flow of projects and collaborations. Second, our projects are performed in a highly multidisciplinary environment that facilitates cross-fertilization and the generation of new ideas. Third, our members hold a collaborative spirit and share leadership. The experience and knowledge of consolidated researchers are complemented by fresh and innovative approaches of younger researchers. Finally, our hospital environment provides our research with a clinical patient-focused perspective, which helps in keeping a holistic view on neurodegenerative diseases. The SPIN cohort is a multimodal biomarker platform designed to study neurodegenerative diseases under a holistic approach. The integration of clinical, neuropsychological, genetic, biochemical, imaging, and neuropathological information and the harmonization of protocols under the same umbrella has allowed the discovery and validation of key biomarkers for these diseases. The data generated are crucial to understanding the pathophysiology of neurodegenerative diseases and to improve their diagnostic and prognostic assessment. Systematic review: Literature was reviewed through PubMed and meeting abstracts. In the past decade, different research teams have launched multimodal biomarker cohorts to improve diagnosis in neurodegenerative diseases. We provide extensive references for the specific protocols and methods used in the SPIN cohort. Interpretation: The integration of clinical, neuropsychological, genetic, biochemical, imaging, and neuropathological information and the harmonization of protocols under the same umbrella allows the discovery and validation of key biomarkers across several neurodegenerative diseases. We describe our particular 10-year experience and how different research projects were unified under an umbrella biomarker program, which might be of help to other research teams pursuing similar approaches. Future directions: Longitudinal integrative data in the SPIN cohort will be of help to further understand the pathophysiology of neurodegenerative diseases and to improve their diagnostic and prognostic assessment.
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Journal:  J Nucl Med       Date:  2012-11-19       Impact factor: 10.057

5.  CSF sAPPβ, YKL-40, and neurofilament light in frontotemporal lobar degeneration.

Authors:  Daniel Alcolea; Eduard Vilaplana; Marc Suárez-Calvet; Ignacio Illán-Gala; Rafael Blesa; Jordi Clarimón; Albert Lladó; Raquel Sánchez-Valle; José L Molinuevo; Guillermo García-Ribas; Yaroslau Compta; María José Martí; Gerard Piñol-Ripoll; Guillermo Amer-Ferrer; Aina Noguera; Ana García-Martín; Juan Fortea; Alberto Lleó
Journal:  Neurology       Date:  2017-06-07       Impact factor: 9.910

6.  Prevalence of amyloid PET positivity in dementia syndromes: a meta-analysis.

Authors:  Rik Ossenkoppele; Willemijn J Jansen; Gil D Rabinovici; Dirk L Knol; Wiesje M van der Flier; Bart N M van Berckel; Philip Scheltens; Pieter Jelle Visser; Sander C J Verfaillie; Marissa D Zwan; Sofie M Adriaanse; Adriaan A Lammertsma; Frederik Barkhof; William J Jagust; Bruce L Miller; Howard J Rosen; Susan M Landau; Victor L Villemagne; Christopher C Rowe; Dong Y Lee; Duk L Na; Sang W Seo; Marie Sarazin; Catherine M Roe; Osama Sabri; Henryk Barthel; Norman Koglin; John Hodges; Cristian E Leyton; Rik Vandenberghe; Koen van Laere; Alexander Drzezga; Stefan Forster; Timo Grimmer; Pascual Sánchez-Juan; Jose M Carril; Vincent Mok; Vincent Camus; William E Klunk; Ann D Cohen; Philipp T Meyer; Sabine Hellwig; Andrew Newberg; Kristian S Frederiksen; Adam S Fleisher; Mark A Mintun; David A Wolk; Agneta Nordberg; Juha O Rinne; Gaël Chételat; Alberto Lleo; Rafael Blesa; Juan Fortea; Karine Madsen; Karen M Rodrigue; David J Brooks
Journal:  JAMA       Date:  2015-05-19       Impact factor: 56.272

7.  A 2-Step Cerebrospinal Algorithm for the Selection of Frontotemporal Lobar Degeneration Subtypes.

Authors:  Alberto Lleó; David J Irwin; Ignacio Illán-Gala; Corey T McMillan; David A Wolk; Edward B Lee; Vivianna M Van Deerlin; Leslie M Shaw; John Q Trojanowski; Murray Grossman
Journal:  JAMA Neurol       Date:  2018-06-01       Impact factor: 18.302

8.  Prevalence of the apolipoprotein E ε4 allele in amyloid β positive subjects across the spectrum of Alzheimer's disease.

Authors:  Niklas Mattsson; Colin Groot; Willemijn J Jansen; Susan M Landau; Victor L Villemagne; Sebastiaan Engelborghs; Mark M Mintun; Alberto Lleo; José Luis Molinuevo; William J Jagust; Giovanni B Frisoni; Adrian Ivanoiu; Gaël Chételat; Catarina Resende de Oliveira; Karen M Rodrigue; Johannes Kornhuber; Anders Wallin; Aleksandra Klimkowicz-Mrowiec; Ramesh Kandimalla; Julius Popp; Pauline P Aalten; Dag Aarsland; Daniel Alcolea; Ina S Almdahl; Inês Baldeiras; Mark A van Buchem; Enrica Cavedo; Kewei Chen; Ann D Cohen; Stefan Förster; Juan Fortea; Kristian S Frederiksen; Yvonne Freund-Levi; Kiran Dip Gill; Olymbia Gkatzima; Timo Grimmer; Harald Hampel; Sanna-Kaisa Herukka; Peter Johannsen; Koen van Laere; Mony J de Leon; Wolfgang Maier; Jan Marcusson; Olga Meulenbroek; Hanne M Møllergård; John C Morris; Barbara Mroczko; Arto Nordlund; Sudesh Prabhakar; Oliver Peters; Lorena Rami; Eloy Rodríguez-Rodríguez; Catherine M Roe; Eckart Rüther; Isabel Santana; Johannes Schröder; Sang W Seo; Hilkka Soininen; Luiza Spiru; Erik Stomrud; Hanne Struyfs; Charlotte E Teunissen; Frans R J Verhey; Stephanie J B Vos; Linda J C van Waalwijk van Doorn; Gunhild Waldemar; Åsa K Wallin; Jens Wiltfang; Rik Vandenberghe; David J Brooks; Tormod Fladby; Christopher C Rowe; Alexander Drzezga; Marcel M Verbeek; Marie Sarazin; David A Wolk; Adam S Fleisher; William E Klunk; Duk L Na; Pascual Sánchez-Juan; Dong Young Lee; Agneta Nordberg; Magda Tsolaki; Vincent Camus; Juha O Rinne; Anne M Fagan; Henrik Zetterberg; Kaj Blennow; Gil D Rabinovici; Oskar Hansson; Bart N M van Berckel; Wiesje M van der Flier; Philip Scheltens; Pieter Jelle Visser; Rik Ossenkoppele
Journal:  Alzheimers Dement       Date:  2018-03-28       Impact factor: 21.566

9.  Relationship between β-Secretase, inflammation and core cerebrospinal fluid biomarkers for Alzheimer's disease.

Authors:  Daniel Alcolea; María Carmona-Iragui; Marc Suárez-Calvet; M Belén Sánchez-Saudinós; Isabel Sala; Sofía Antón-Aguirre; Rafael Blesa; Jordi Clarimón; Juan Fortea; Alberto Lleó
Journal:  J Alzheimers Dis       Date:  2014       Impact factor: 4.472

10.  YKL-40 (Chitinase 3-like I) is expressed in a subset of astrocytes in Alzheimer's disease and other tauopathies.

Authors:  Marta Querol-Vilaseca; Martí Colom-Cadena; Jordi Pegueroles; Carla San Martín-Paniello; Jordi Clarimon; Olivia Belbin; Juan Fortea; Alberto Lleó
Journal:  J Neuroinflammation       Date:  2017-06-09       Impact factor: 8.322

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  16 in total

1.  Different Inflammatory Signatures in Alzheimer's Disease and Frontotemporal Dementia Cerebrospinal Fluid.

Authors:  Gustaf Boström; Eva Freyhult; Johan Virhammar; Daniel Alcolea; Hayrettin Tumani; Markus Otto; Rose-Marie Brundin; Lena Kilander; Malin Löwenmark; Vilmantas Giedraitis; Alberto Lleó; Christine A F von Arnim; Kim Kultima; Martin Ingelsson
Journal:  J Alzheimers Dis       Date:  2021       Impact factor: 4.472

2.  Clinical and biomarker changes of Alzheimer's disease in adults with Down syndrome: a cross-sectional study.

Authors:  Juan Fortea; Eduard Vilaplana; Maria Carmona-Iragui; Bessy Benejam; Laura Videla; Isabel Barroeta; Susana Fernández; Miren Altuna; Jordi Pegueroles; Víctor Montal; Silvia Valldeneu; Sandra Giménez; Sofía González-Ortiz; Laia Muñoz; Teresa Estellés; Ignacio Illán-Gala; Olivia Belbin; Valle Camacho; Liam Reese Wilson; Tiina Annus; Ricardo S Osorio; Sebastián Videla; Sylvain Lehmann; Anthony J Holland; Daniel Alcolea; Jordi Clarimón; Shahid H Zaman; Rafael Blesa; Alberto Lleó
Journal:  Lancet       Date:  2020-06-27       Impact factor: 79.321

3.  Disease-Specific Changes in Reelin Protein and mRNA in Neurodegenerative Diseases.

Authors:  Laia Lidón; Laura Urrea; Franc Llorens; Vanessa Gil; Ignacio Alvarez; Monica Diez-Fairen; Miguel Aguilar; Pau Pastor; Inga Zerr; Daniel Alcolea; Alberto Lleó; Enric Vidal; Rosalina Gavín; Isidre Ferrer; Jose Antonio Del Rio
Journal:  Cells       Date:  2020-05-19       Impact factor: 6.600

4.  Diagnostic Utility of Measuring Cerebral Atrophy in the Behavioral Variant of Frontotemporal Dementia and Association With Clinical Deterioration.

Authors:  Ignacio Illán-Gala; Neus Falgàs; Adit Friedberg; Sheila Castro-Suárez; Ophir Keret; Nicole Rogers; Didem Oz; Salvatore Nigro; Andrea Quattrone; Aldo Quattrone; Amy Wolf; Kyan Younes; Miguel Santos-Santos; Sergi Borrego-Écija; Yann Cobigo; Oriol Dols-Icardo; Albert Lladó; Raquel Sánchez-Valle; Jordi Clarimon; Rafael Blesa; Daniel Alcolea; Juan Fortea; Alberto Lleó; Lea T Grinberg; Salvatore Spina; Joel H Kramer; Gil D Rabinovici; Adam Boxer; Maria Luisa Gorno Tempini; Bruce L Miller; William W Seeley; Howard J Rosen; David C Perry
Journal:  JAMA Netw Open       Date:  2021-03-01

5.  Sex differences in the behavioral variant of frontotemporal dementia: A new window to executive and behavioral reserve.

Authors:  Ignacio Illán-Gala; Kaitlin B Casaletto; Sergi Borrego-Écija; Eider M Arenaza-Urquijo; Amy Wolf; Yann Cobigo; Sheng Yang M Goh; Adam M Staffaroni; Daniel Alcolea; Juan Fortea; Rafael Blesa; Jordi Clarimon; Maria Florencia Iulita; Anna Brugulat-Serrat; Albert Lladó; Lea T Grinberg; Katherine Possin; Katherine P Rankin; Joel H Kramer; Gil D Rabinovici; Adam Boxer; William W Seeley; Virginia E Sturm; Maria Luisa Gorno-Tempini; Bruce L Miller; Raquel Sánchez-Valle; David C Perry; Alberto Lleó; Howard J Rosen
Journal:  Alzheimers Dement       Date:  2021-02-16       Impact factor: 16.655

6.  Cortical microstructure in the amyotrophic lateral sclerosis-frontotemporal dementia continuum.

Authors:  Ignacio Illán-Gala; Victor Montal; Jordi Pegueroles; Eduard Vilaplana; Daniel Alcolea; Oriol Dols-Icardo; Noemi de Luna; Janina Turón-Sans; Elena Cortés-Vicente; Luis Martinez-Roman; Maria Belén Sánchez-Saudinós; Andrea Subirana; Laura Videla; Isabel Sala; Isabel Barroeta; Sílvia Valldeneu; Rafael Blesa; Jordi Clarimón; Alberto Lleó; Juan Fortea; Ricard Rojas-García
Journal:  Neurology       Date:  2020-09-10       Impact factor: 9.910

7.  Evaluation of biochemical and hematological parameters in adults with Down syndrome.

Authors:  David de Gonzalo-Calvo; Isabel Barroeta; Madalina Nicoleta Nan; José Rives; Diana Garzón; María Carmona-Iragui; Bessy Benejam; Laura Videla; Susana Fernández; Miren Altuna; Sílvia Valldeneu; Rafael Blesa; Alberto Lleó; Francisco Blanco-Vaca; Juan Fortea; Mireia Tondo
Journal:  Sci Rep       Date:  2020-08-13       Impact factor: 4.379

8.  Genomic Characterization of Host Factors Related to SARS-CoV-2 Infection in People with Dementia and Control Populations: The GR@ACE/DEGESCO Study.

Authors:  Itziar de Rojas; Isabel Hernández; Laura Montrreal; Inés Quintela; Miguel Calero; Jose Luís Royo; Raquel Huerto Vilas; Antonio González-Pérez; Emilio Franco-Macías; Juan Macías; Manuel Menéndez-González; Ana Frank-García; Mónica Diez-Fairen; Carmen Lage; Sebastián García-Madrona; Nuria Aguilera; Pablo García-González; Raquel Puerta; Oscar Sotolongo-Grau; Silvia Alonso-Lana; Alberto Rábano; Alfonso Arias Pastor; Ana Belén Pastor; Anaïs Corma-Gómez; Angel Martín Montes; Carmen Martínez Rodríguez; Dolores Buiza-Rueda; Maria Teresa Periñán; Eloy Rodriguez-Rodriguez; Ignacio Alvarez; Irene Rosas Allende; Juan A Pineda; María Bernal Sánchez-Arjona; Marta Fernández-Fuertes; Silvia Mendoza; Teodoro Del Ser; Guillermo Garcia-Ribas; Pascual Sánchez-Juan; Pau Pastor; María J Bullido; Victoria Álvarez; Luis M Real; Pablo Mir; Gerard Piñol-Ripoll; Jose María García-Alberca; Miguel Medina; Adelina Orellana; Chris R Butler; Marta Marquié; María Eugenia Sáez; Ángel Carracedo; Lluís Tárraga; Mercè Boada; Agustín Ruiz
Journal:  J Pers Med       Date:  2021-12-07

9.  Phosphorylated tau181 in plasma as a potential biomarker for Alzheimer's disease in adults with Down syndrome.

Authors:  Alberto Lleó; Henrik Zetterberg; Jordi Pegueroles; Thomas K Karikari; María Carmona-Iragui; Nicholas J Ashton; Victor Montal; Isabel Barroeta; Juan Lantero-Rodríguez; Laura Videla; Miren Altuna; Bessy Benejam; Susana Fernandez; Silvia Valldeneu; Diana Garzón; Alexandre Bejanin; Maria Florencia Iulita; Valle Camacho; Santiago Medrano-Martorell; Olivia Belbin; Jordi Clarimon; Sylvain Lehmann; Daniel Alcolea; Rafael Blesa; Kaj Blennow; Juan Fortea
Journal:  Nat Commun       Date:  2021-07-14       Impact factor: 14.919

10.  VAMP-2 is a surrogate cerebrospinal fluid marker of Alzheimer-related cognitive impairment in adults with Down syndrome.

Authors:  Alberto Lleó; Maria Carmona-Iragui; Laura Videla; Susana Fernández; Bessy Benejam; Jordi Pegueroles; Isabel Barroeta; Miren Altuna; Silvia Valldeneu; Mei-Fang Xiao; Desheng Xu; Raúl Núñez-Llaves; Marta Querol-Vilaseca; Sònia Sirisi; Alexandre Bejanin; M Florencia Iulita; Jordi Clarimón; Rafael Blesa; Paul Worley; Daniel Alcolea; Juan Fortea; Olivia Belbin
Journal:  Alzheimers Res Ther       Date:  2021-06-28       Impact factor: 6.982

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