Literature DB >> 31529579

Metal-Chelated Polymer Nanodiscs for NMR Studies.

Nathaniel Z Hardin1, Vojč Kocman1, Giacomo M Di Mauro1, Thirupathi Ravula1, Ayyalusamy Ramamoorthy1.   

Abstract

Paramagnetic relaxation enhancement (PRE) is commonly used to speed up spin lattice relaxation time (T1 ) for rapid data acquisition in NMR structural studies. Consequently, there is significant interest in novel paramagnetic labels for enhanced NMR studies on biomolecules. Herein, we report the synthesis and characterization of a modified poly(styrene-co-maleic acid) polymer which forms nanodiscs while showing the ability to chelate metal ions. Cu2+ -chelated nanodiscs are demonstrated to reduce the T1 of protons for both polymer and lipid-nanodisc components. The chelated nanodiscs also decrease the proton T1 values for a water-soluble DNA G-quadruplex. These results suggest that polymer nanodiscs functionalized with paramagnetic tags can be used to speed-up data acquisition from lipid bilayer samples and also to provide structural information from water-soluble biomolecules.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  NMR spectrocopy; T1 enhancement; metal chelation; paramagnetic relaxation enhancement (PRE); polymer nanodiscs

Year:  2019        PMID: 31529579      PMCID: PMC6861636          DOI: 10.1002/anie.201910118

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  41 in total

1.  Probing protein structure by solvent perturbation of nuclear magnetic resonance spectra. Nuclear magnetic resonance spectral editing and topological mapping in proteins by paramagnetic relaxation filtering.

Authors:  G Esposito; A M Lesk; H Molinari; A Motta; N Niccolai; A Pastore
Journal:  J Mol Biol       Date:  1992-04-05       Impact factor: 5.469

2.  Solvent suppression in DNP enhanced solid state NMR.

Authors:  Jayasubba Reddy Yarava; Sachin Rama Chaudhari; Aaron J Rossini; Anne Lesage; Lyndon Emsley
Journal:  J Magn Reson       Date:  2017-03-01       Impact factor: 2.229

3.  Use of a copper-chelated lipid speeds up NMR measurements from membrane proteins.

Authors:  Kazutoshi Yamamoto; Jiadi Xu; Karen E Kawulka; John C Vederas; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-05-26       Impact factor: 15.419

4.  Effect of polymer charge on functional reconstitution of membrane proteins in polymer nanodiscs.

Authors:  Thirupathi Ravula; Nathaniel Z Hardin; Jia Bai; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2018-08-23       Impact factor: 6.222

Review 5.  New NMR tools for protein structure and function: Spin tags for dynamic nuclear polarization solid state NMR.

Authors:  Rivkah Rogawski; Ann E McDermott
Journal:  Arch Biochem Biophys       Date:  2017-06-13       Impact factor: 4.013

Review 6.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

7.  Detergent-free isolation, characterization, and functional reconstitution of a tetrameric K+ channel: the power of native nanodiscs.

Authors:  Jonas M Dörr; Martijn C Koorengevel; Marre Schäfer; Alexander V Prokofyev; Stefan Scheidelaar; Elwin A W van der Cruijsen; Timothy R Dafforn; Marc Baldus; J Antoinette Killian
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-15       Impact factor: 11.205

8.  High frequency dynamic nuclear polarization.

Authors:  Qing Zhe Ni; Eugenio Daviso; Thach V Can; Evgeny Markhasin; Sudheer K Jawla; Timothy M Swager; Richard J Temkin; Judith Herzfeld; Robert G Griffin
Journal:  Acc Chem Res       Date:  2013-04-18       Impact factor: 22.384

9.  RNA structure. Structure of the HIV-1 RNA packaging signal.

Authors:  Sarah C Keane; Xiao Heng; Kun Lu; Siarhei Kharytonchyk; Venkateswaran Ramakrishnan; Gregory Carter; Shawn Barton; Azra Hosic; Alyssa Florwick; Justin Santos; Nicholas C Bolden; Sayo McCowin; David A Case; Bruce A Johnson; Marco Salemi; Alice Telesnitsky; Michael F Summers
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

10.  Solubilization of Membrane Proteins into Functional Lipid-Bilayer Nanodiscs Using a Diisobutylene/Maleic Acid Copolymer.

Authors:  Abraham Olusegun Oluwole; Bartholomäus Danielczak; Annette Meister; Jonathan Oyebamiji Babalola; Carolyn Vargas; Sandro Keller
Journal:  Angew Chem Int Ed Engl       Date:  2017-01-12       Impact factor: 15.336

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  3 in total

1.  Measurement of Residual Dipolar Couplings Using Magnetically Aligned and Flipped Nanodiscs.

Authors:  Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2021-12-29       Impact factor: 4.331

2.  Synthesis and Evaluation of a Library of Alternating Amphipathic Copolymers to Solubilize and Study Membrane Proteins.

Authors:  Adrian H Kopf; Odette Lijding; Barend O W Elenbaas; Martijn C Koorengevel; Justyna M Dobruchowska; Cornelis A van Walree; J Antoinette Killian
Journal:  Biomacromolecules       Date:  2022-01-07       Impact factor: 6.988

3.  Solid-State NMR Study to Probe the Effects of Divalent Metal Ions (Ca2+ and Mg2+) on the Magnetic Alignment of Polymer-Based Lipid Nanodiscs.

Authors:  Thirupathi Ravula; Xiaofeng Dai; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2021-06-15       Impact factor: 4.331

  3 in total

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