Literature DB >> 28623034

New NMR tools for protein structure and function: Spin tags for dynamic nuclear polarization solid state NMR.

Rivkah Rogawski1, Ann E McDermott2.   

Abstract

Magic angle spinning solid state NMR studies of biological macromolecules [1-3] have enabled exciting studies of membrane proteins [4,5], amyloid fibrils [6], viruses, and large macromolecular assemblies [7]. Dynamic nuclear polarization (DNP) provides a means to enhance detection sensitivity for NMR, particularly for solid state NMR, with many recent biological applications and considerable contemporary efforts towards elaboration and optimization of the DNP experiment. This review explores precedents and innovations in biological DNP experiments, especially highlighting novel chemical biology approaches to introduce the radicals that serve as a source of polarization in DNP experiments.
Copyright © 2017. Published by Elsevier Inc.

Entities:  

Keywords:  Dynamic nuclear polarization; In cell NMR; Nitroxide biradical; Paramagnetic tags; Solid state NMR

Mesh:

Substances:

Year:  2017        PMID: 28623034      PMCID: PMC5815514          DOI: 10.1016/j.abb.2017.06.010

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  157 in total

1.  Dynamic nuclear polarization-enhanced solid-state NMR spectroscopy of GNNQQNY nanocrystals and amyloid fibrils.

Authors:  Galia T Debelouchina; Marvin J Bayro; Patrick C A van der Wel; Marc A Caporini; Alexander B Barnes; Melanie Rosay; Werner E Maas; Robert G Griffin
Journal:  Phys Chem Chem Phys       Date:  2010-05-08       Impact factor: 3.676

2.  Intracellular conformations of human telomeric quadruplexes studied by electron paramagnetic resonance spectroscopy.

Authors:  Mykhailo Azarkh; Vijay Singh; Oliver Okle; Daniel R Dietrich; Jörg S Hartig; Malte Drescher
Journal:  Chemphyschem       Date:  2012-03-06       Impact factor: 3.102

3.  The effect of biradical concentration on the performance of DNP-MAS-NMR.

Authors:  Sascha Lange; Arne H Linden; Umit Akbey; W Trent Franks; Nikolaus M Loening; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  J Magn Reson       Date:  2012-01-08       Impact factor: 2.229

4.  Spin labeling in enzymology: spin-labeled enzymes and proteins.

Authors:  L J Berliner
Journal:  Methods Enzymol       Date:  1978       Impact factor: 1.600

5.  Successive Stages of Amyloid-β Self-Assembly Characterized by Solid-State Nuclear Magnetic Resonance with Dynamic Nuclear Polarization.

Authors:  Alexey Potapov; Wai-Ming Yau; Rodolfo Ghirlando; Kent R Thurber; Robert Tycko
Journal:  J Am Chem Soc       Date:  2015-06-19       Impact factor: 15.419

6.  Topical Developments in High-Field Dynamic Nuclear Polarization.

Authors:  Vladimir K Michaelis; Ta-Chung Ong; Matthew K Kiesewetter; Derik K Frantz; Joseph J Walish; Enrico Ravera; Claudio Luchinat; Timothy M Swager; Robert G Griffin
Journal:  Isr J Chem       Date:  2014-02-13       Impact factor: 3.333

7.  Evaluation of spin labels for in-cell EPR by analysis of nitroxide reduction in cell extract of Xenopus laevis oocytes.

Authors:  Mykhailo Azarkh; Oliver Okle; Philipp Eyring; Daniel R Dietrich; Malte Drescher
Journal:  J Magn Reson       Date:  2011-07-26       Impact factor: 2.229

8.  Structural studies of proteins by paramagnetic solid-state NMR spectroscopy.

Authors:  Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

9.  High-field 13C dynamic nuclear polarization with a radical mixture.

Authors:  Vladimir K Michaelis; Albert A Smith; Björn Corzilius; Olesya Haze; Timothy M Swager; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2013-02-13       Impact factor: 15.419

10.  A fluorogenic TMP-tag for high signal-to-background intracellular live cell imaging.

Authors:  Chaoran Jing; Virginia W Cornish
Journal:  ACS Chem Biol       Date:  2013-06-19       Impact factor: 5.100

View more
  7 in total

1.  A biradical-tagged phospholipid as a polarizing agent for solid-state MAS Dynamic Nuclear Polarization NMR of membrane proteins.

Authors:  Daryl B Good; Maxim A Voinov; David Bolton; Meaghan E Ward; Ivan V Sergeyev; Marc Caporini; Peter Scheffer; Andy Lo; Melanie Rosay; Antonin Marek; Leonid S Brown; Alex I Smirnov; Vlad Ladizhansky
Journal:  Solid State Nucl Magn Reson       Date:  2019-04-17       Impact factor: 2.293

2.  Targetable Tetrazine-Based Dynamic Nuclear Polarization Agents for Biological Systems.

Authors:  Byung Joon Lim; Bryce E Ackermann; Galia T Debelouchina
Journal:  Chembiochem       Date:  2020-01-21       Impact factor: 3.164

3.  TOAC spin-labeled peptides tailored for DNP-NMR studies in lipid membrane environments.

Authors:  Shiying Zhu; Ehsan Kachooei; Jeffrey R Harmer; Louise J Brown; Frances Separovic; Marc-Antoine Sani
Journal:  Biophys J       Date:  2021-09-02       Impact factor: 3.699

4.  NMR Signal Quenching from Bound Biradical Affinity Reagents in DNP Samples.

Authors:  Rivkah Rogawski; Ivan V Sergeyev; Yinglu Zhang; Timothy H Tran; Yongjun Li; Liang Tong; Ann E McDermott
Journal:  J Phys Chem B       Date:  2017-11-29       Impact factor: 2.991

5.  Metal-Chelated Polymer Nanodiscs for NMR Studies.

Authors:  Nathaniel Z Hardin; Vojč Kocman; Giacomo M Di Mauro; Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-17       Impact factor: 15.336

Review 6.  Targeted DNP for biomolecular solid-state NMR.

Authors:  Diego Gauto; Ons Dakhlaoui; Ildefonso Marin-Montesinos; Sabine Hediger; Gaël De Paëpe
Journal:  Chem Sci       Date:  2021-03-23       Impact factor: 9.825

Review 7.  In-Cell NMR: Analysis of Protein-Small Molecule Interactions, Metabolic Processes, and Protein Phosphorylation.

Authors:  Amit Kumar; Lars T Kuhn; Jochen Balbach
Journal:  Int J Mol Sci       Date:  2019-01-17       Impact factor: 5.923

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.