Literature DB >> 31325686

Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Vojč Kocman1, Giacomo M Di Mauro2, Gianluigi Veglia3, Ayyalusamy Ramamoorthy4.   

Abstract

NMR spectroscopy is a powerful experimental technique to study biological systems at the atomic resolution. However, its intrinsic low sensitivity results in long acquisition times that in extreme cases lasts for days (or even weeks) often exceeding the lifetime of the sample under investigation. Different paramagnetic agents have been used in an effort to decrease the spin-lattice (T1) relaxation times of the studied nuclei, which are the main cause for long acquisition times necessary for signal averaging to enhance the signal-to-noise ratio of NMR spectra. Consequently, most of the experimental time is "wasted" in waiting for the magnetization to recover between successive scans. In this review, we discuss how to set up an optimal paramagnetic relaxation enhancement (PRE) system to effectively reduce the T1 relaxation times avoiding significant broadening of NMR signals. Additionally, we describe how PRE-agents can be used to provide structural and dynamic information and can even be used to follow the intermediates of chemical reactions and to speed-up data acquisition. We also describe the unique challenges and benefits associated with the application of PRE to solid-state NMR spectroscopy, explaining how the use of PREs is more complex for membrane mimetic systems as PREs can also be exploited to change the alignment of oriented membrane systems. Functionalization of membrane mimetics, such as bicelles, can provide a controlled region of paramagnetic effect that has the potential, together with the desired alignment, to provide crucial biologically relevant structural information. And finally, we discuss how paramagnetic metals can be utilized to further increase the dynamic nuclear polarization (DNP) effects and how to preserve the enhancements when dissolution DNP is implemented.
Copyright © 2019 Elsevier Inc. All rights reserved.

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Year:  2019        PMID: 31325686      PMCID: PMC6698407          DOI: 10.1016/j.ssnmr.2019.07.002

Source DB:  PubMed          Journal:  Solid State Nucl Magn Reson        ISSN: 0926-2040            Impact factor:   2.293


  156 in total

1.  Sensitivity enhancement in solid-state (13)C NMR of synthetic polymers and biopolymers by (1)H NMR detection with high-speed magic angle spinning.

Authors:  Y Ishii; J P Yesinowski; R Tycko
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2.  An experimental strategy to dramatically reduce the RF power used in cross polarization solid-state NMR spectroscopy.

Authors:  S C Shekar; D K Lee; A Ramamoorthy
Journal:  J Am Chem Soc       Date:  2001-08-01       Impact factor: 15.419

3.  Kinetics of cross-polarization in solid-state NMR: a guide for chemists.

Authors:  Waclaw Kolodziejski; Jacek Klinowski
Journal:  Chem Rev       Date:  2002-03       Impact factor: 60.622

4.  A "magic sandwich" pulse sequence with reduced offset dependence for high-resolution separated local field spectroscopy.

Authors:  Alexander A Nevzorov; Stanley J Opella
Journal:  J Magn Reson       Date:  2003-09       Impact factor: 2.229

Review 5.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

6.  Transverse dephasing optimized solid-state NMR spectroscopy.

Authors:  G De Paëpe; N Giraud; A Lesage; P Hodgkinson; A Böckmann; L Emsley
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

7.  Modulation of the distance dependence of paramagnetic relaxation enhancements by CSA x DSA cross-correlation.

Authors:  Guido Pintacuda; Andrei Kaikkonen; Gottfried Otting
Journal:  J Magn Reson       Date:  2004-12       Impact factor: 2.229

8.  Resonance assignment of 13C/15N labeled solid proteins by two- and three-dimensional magic-angle-spinning NMR.

Authors:  M Hong
Journal:  J Biomol NMR       Date:  1999-09       Impact factor: 2.835

9.  Lanthanide chelates as bilayer alignment tools in NMR studies of membrane-associated peptides.

Authors:  R S Prosser; H Bryant; R G Bryant; R R Vold
Journal:  J Magn Reson       Date:  1999-12       Impact factor: 2.229

10.  Increase in signal-to-noise ratio of > 10,000 times in liquid-state NMR.

Authors:  Jan H Ardenkjaer-Larsen; Björn Fridlund; Andreas Gram; Georg Hansson; Lennart Hansson; Mathilde H Lerche; Rolf Servin; Mikkel Thaning; Klaes Golman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-20       Impact factor: 11.205

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  2 in total

Review 1.  Paramagnetic Chemical Probes for Studying Biological Macromolecules.

Authors:  Qing Miao; Christoph Nitsche; Henry Orton; Mark Overhand; Gottfried Otting; Marcellus Ubbink
Journal:  Chem Rev       Date:  2022-01-27       Impact factor: 72.087

2.  Metal-Chelated Polymer Nanodiscs for NMR Studies.

Authors:  Nathaniel Z Hardin; Vojč Kocman; Giacomo M Di Mauro; Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-17       Impact factor: 15.336

  2 in total

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