Literature DB >> 30638530

Chemical Exchange.

Arthur G Palmer1, Hans Koss2.   

Abstract

The phenomenon of chemical or conformational exchange in NMR spectroscopy has enabled detailed characterization of time-dependent aspects of biomolecular function, including folding, molecular recognition, allostery, and catalysis, on timescales from microsecond to second. Importantly, NMR methods based on a variety of spin relaxation parameters have been developed that provide quantitative information on interconversion kinetics, thermodynamic properties, and structural features of molecular states populated to a fraction of a percent at equilibrium and otherwise unobservable by other NMR approaches. The ongoing development of more sophisticated experimental techniques and the necessity to apply these methods to larger and more complex molecular systems engenders a corresponding need for theoretical advances describing such techniques and facilitating data analysis in applications. This review surveys current aspects of the theory of chemical exchange, as utilized in ZZ-exchange; Hahn and Carr-Purcell-Meiboom-Gill (CPMG) spin-echo; and R1ρ, chemical exchange saturation transfer (CEST), and dark state saturation transfer (DEST) spin-locking experiments. The review emphasizes theoretical results for kinetic topologies with more than two interconverting states, both to obtain compact analytical forms suitable for data analysis and to establish conditions for distinguishability between alternative kinetic schemes.
© 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bloch–McConnell; Dynamics; Kinetics; NMR spectroscopy; Spin relaxation

Mesh:

Year:  2018        PMID: 30638530     DOI: 10.1016/bs.mie.2018.09.028

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  14 in total

1.  Detection of chemical exchange in methyl groups of macromolecules.

Authors:  Michelle L Gill; Andrew Hsu; Arthur G Palmer
Journal:  J Biomol NMR       Date:  2019-08-12       Impact factor: 2.835

2.  Algebraic expressions for Carr-Purcell-Meiboom-Gill relaxation dispersion for N-site chemical exchange.

Authors:  Hans Koss; Mark Rance; Arthur G Palmer
Journal:  J Magn Reson       Date:  2020-10-08       Impact factor: 2.229

Review 3.  Characterizing micro-to-millisecond chemical exchange in nucleic acids using off-resonance R relaxation dispersion.

Authors:  Atul Rangadurai; Eric S Szymaski; Isaac J Kimsey; Honglue Shi; Hashim M Al-Hashimi
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2019-05-11       Impact factor: 9.795

4.  Deuteron Quadrupolar Chemical Exchange Saturation Transfer (Q-CEST) Solid-State NMR for Static Powder Samples: Approach and Applications to Amyloid-β Fibrils.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Riqiang Fu
Journal:  Chemphyschem       Date:  2020-01-09       Impact factor: 3.102

Review 5.  Conformational Dynamics of Intrinsically Disordered Proteins Regulate Biomolecular Condensate Chemistry.

Authors:  Anton Abyzov; Martin Blackledge; Markus Zweckstetter
Journal:  Chem Rev       Date:  2022-02-18       Impact factor: 60.622

6.  The A39G FF domain folds on a volcano-shaped free energy surface via separate pathways.

Authors:  Ved P Tiwari; Yuki Toyama; Debajyoti De; Lewis E Kay; Pramodh Vallurupalli
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-16       Impact factor: 11.205

7.  Real-time Exchange of the Lipid-bound Intermediate and Post-fusion States of the HIV-1 gp41 Ectodomain.

Authors:  Sai Chaitanya Chiliveri; John M Louis; Robert B Best; Ad Bax
Journal:  J Mol Biol       Date:  2022-06-11       Impact factor: 6.151

8.  Compact expressions for R1ρ relaxation for N-site chemical exchange using Schur decomposition.

Authors:  Mark Rance; Arthur G Palmer
Journal:  J Magn Reson       Date:  2020-03-14       Impact factor: 2.229

9.  Achieving pure spin effects by artifact suppression in methyl adiabatic relaxation experiments.

Authors:  Fa-An Chao; Domarin Khago; R Andrew Byrd
Journal:  J Biomol NMR       Date:  2020-04-24       Impact factor: 2.835

Review 10.  Recent developments in deuterium solid-state NMR for the detection of slow motions in proteins.

Authors:  Liliya Vugmeyster
Journal:  Solid State Nucl Magn Reson       Date:  2021-01-07       Impact factor: 2.293

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