Literature DB >> 33128917

Algebraic expressions for Carr-Purcell-Meiboom-Gill relaxation dispersion for N-site chemical exchange.

Hans Koss1, Mark Rance2, Arthur G Palmer1.   

Abstract

The Carr-Purcell-Meiboom-Gill (CPMG) NMR relaxation dispersion experiment measures the effective relaxation rate constant during a train of spin-echo pulse sequence elements as a function of the echo time. The CPMG experiment is a powerful method for characterizing chemical and conformational dynamic processes, termed chemical and conformational exchange, on μs-ms time scales, comparable to the experimentally accessible echo times. Approximate theoretical expressions for the effective relaxation rate constant for N-site chemical exchange have been reported (H. Koss, M. Rance, and A. G. Palmer, Biochemistry 57, 4753-4763 (2018)). Expressions for the effective relaxation rate constant have been improved by using the Cayley-Hamilton theorem to obtain simple and accurate approximations of the average Liouvillian for the CPMG experiment. The improved accuracy of the results allows efficient analyses of experimental data. In addition, the relationship is clarified between the approach of Koss and coworkers and that of Jen (1978).
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bloch-McConnell equation; Conformational exchange; Dynamics; Kinetics; NMR spectroscopy; Rotating-frame relaxation; Spin-echo

Year:  2020        PMID: 33128917      PMCID: PMC8129722          DOI: 10.1016/j.jmr.2020.106846

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  Off-resonance effects in 15N T2 CPMG measurements.

Authors:  D M Korzhnev; E V Tischenko; A S Arseniev
Journal:  J Biomol NMR       Date:  2000-07       Impact factor: 2.835

2.  Low-populated folding intermediates of Fyn SH3 characterized by relaxation dispersion NMR.

Authors:  Dmitry M Korzhnev; Xavier Salvatella; Michele Vendruscolo; Ariel A Di Nardo; Alan R Davidson; Christopher M Dobson; Lewis E Kay
Journal:  Nature       Date:  2004-07-29       Impact factor: 49.962

3.  A phase cycle scheme that significantly suppresses offset-dependent artifacts in the R2-CPMG 15N relaxation experiment.

Authors:  Grover N B Yip; Erik R P Zuiderweg
Journal:  J Magn Reson       Date:  2004-11       Impact factor: 2.229

4.  Chemical Exchange.

Authors:  Arthur G Palmer; Hans Koss
Journal:  Methods Enzymol       Date:  2018-12-04       Impact factor: 1.600

5.  Rotation operator propagators for time-varying radiofrequency pulses in NMR spectroscopy: applications to shaped pulses and pulse trains.

Authors:  Ying Li; Mark Rance; Arthur G Palmer
Journal:  J Magn Reson       Date:  2014-09-22       Impact factor: 2.229

6.  General expressions for R1ρ relaxation for N-site chemical exchange and the special case of linear chains.

Authors:  Hans Koss; Mark Rance; Arthur G Palmer
Journal:  J Magn Reson       Date:  2016-10-27       Impact factor: 2.229

7.  Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE.

Authors:  Kenji Sugase; Tsuyoshi Konuma; Jonathan C Lansing; Peter E Wright
Journal:  J Biomol NMR       Date:  2013-06-11       Impact factor: 2.835

8.  General Expressions for Carr-Purcell-Meiboom-Gill Relaxation Dispersion for N-Site Chemical Exchange.

Authors:  Hans Koss; Mark Rance; Arthur G Palmer
Journal:  Biochemistry       Date:  2018-07-30       Impact factor: 3.162

9.  Disulfide bond isomerization in basic pancreatic trypsin inhibitor: multisite chemical exchange quantified by CPMG relaxation dispersion and chemical shift modeling.

Authors:  Michael J Grey; Chunyu Wang; Arthur G Palmer
Journal:  J Am Chem Soc       Date:  2003-11-26       Impact factor: 15.419

10.  An exact solution for R2,eff in CPMG experiments in the case of two site chemical exchange.

Authors:  Andrew J Baldwin
Journal:  J Magn Reson       Date:  2014-04-13       Impact factor: 2.229

  10 in total

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