Literature DB >> 30517811

Nonequilibrium Energetics of Molecular Motor Kinesin.

Takayuki Ariga1,2, Michio Tomishige3, Daisuke Mizuno2.   

Abstract

Nonequilibrium energetics of single molecule translational motor kinesin was investigated by measuring heat dissipation from the violation of the fluctuation-response relation of a probe attached to the motor using optical tweezers. The sum of the dissipation and work did not amount to the input free energy change, indicating large hidden dissipation exists. Possible sources of the hidden dissipation were explored by analyzing the Langevin dynamics of the probe, which incorporates the two-state Markov stepper as a kinesin model. We conclude that internal dissipation is dominant.

Year:  2018        PMID: 30517811     DOI: 10.1103/PhysRevLett.121.218101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  10 in total

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Review 2.  Experimental and theoretical energetics of walking molecular motors under fluctuating environments.

Authors:  Takayuki Ariga; Michio Tomishige; Daisuke Mizuno
Journal:  Biophys Rev       Date:  2020-03-16

3.  Session 2SDA-Nonequilibrium energetics of biological molecular machines.

Authors:  Shoichi Toyabe; Chun-Biu Li; Kazushi Kinbara
Journal:  Biophys Rev       Date:  2020-02-27

4.  Insights from an information thermodynamics analysis of a synthetic molecular motor.

Authors:  Shuntaro Amano; Massimiliano Esposito; Elisabeth Kreidt; David A Leigh; Emanuele Penocchio; Benjamin M W Roberts
Journal:  Nat Chem       Date:  2022-03-17       Impact factor: 24.274

5.  Structural basis for power stroke vs. Brownian ratchet mechanisms of motor proteins.

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Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-10       Impact factor: 11.205

6.  Physical bioenergetics: Energy fluxes, budgets, and constraints in cells.

Authors:  Xingbo Yang; Matthias Heinemann; Jonathon Howard; Greg Huber; Srividya Iyer-Biswas; Guillaume Le Treut; Michael Lynch; Kristi L Montooth; Daniel J Needleman; Simone Pigolotti; Jonathan Rodenfels; Pierre Ronceray; Sadasivan Shankar; Iman Tavassoly; Shashi Thutupalli; Denis V Titov; Jin Wang; Peter J Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-29       Impact factor: 11.205

7.  The Impact of Rate Formulations on Stochastic Molecular Motor Dynamics.

Authors:  R Blackwell; D Jung; M Bukenberger; A-S Smith
Journal:  Sci Rep       Date:  2019-12-05       Impact factor: 4.379

8.  A mechanochemical model of the forward/backward movement of motor protein kinesin-1.

Authors:  Beibei Shen; Yunxin Zhang
Journal:  J Biol Chem       Date:  2022-04-18       Impact factor: 5.486

9.  DNA sliding and loop formation by E. coli SMC complex: MukBEF.

Authors:  Man Zhou
Journal:  Biochem Biophys Rep       Date:  2022-06-22

10.  A Generalized Kinetic Model for Coupling between Stepping and ATP Hydrolysis of Kinesin Molecular Motors.

Authors:  Ping Xie; Si-Kao Guo; Hong Chen
Journal:  Int J Mol Sci       Date:  2019-10-03       Impact factor: 5.923

  10 in total

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