| Literature DB >> 30084192 |
E Osuch1,2,3, S Gao4,5, M Wammes2, J Théberge1,2,3, P Willimason2,3, R J Neufeld6, Y Du7,8, J Sui4,5,7,9, V Calhoun7,10.
Abstract
OBJECTIVE: This study determined the clinical utility of an fMRI classification algorithm predicting medication-class of response in patients with challenging mood diagnoses.Entities:
Keywords: bipolar disorder; differential diagnosis; functional neuroimaging; machine learning; mood disorders
Mesh:
Year: 2018 PMID: 30084192 PMCID: PMC6204076 DOI: 10.1111/acps.12945
Source DB: PubMed Journal: Acta Psychiatr Scand ISSN: 0001-690X Impact factor: 6.392
Figure 1Flowchart of method. (a) Training classifiers and predicting diagnosis of subjects with known group labels. The training stage is composed of four parts as mentioned. Group independent component analysis (ICA) is computed on temporally concatenated fMRI data of bipolar disorder (BD) patients, major depressive disorder (MDD) patients, and healthy controls (HCs) resulting in individual subject maps computed by GIG‐ICA 17. Note that the UNK subjects were not involved in the computation of the group‐level ICA. For each cross‐validation loop, similarity matrices for BD, MDD were computed and classified via a kernel support vector machine (SVM) from the hold‐out data using 10‐fold cross‐validation. Namely, inner loop (dotted line frame) generated 9 SVM models, and a whole nested 10‐fold cross‐validation generated 90 SVM models. After repeating 10 times, 900 SVM classifiers were generated for the majority voting in prediction. (b) Predicting diagnosis of subjects with unknown labels. Following group ICA and individual subject map calculation, a similarity matrix between the UNK and the BD and MDD individuals was computed. Diagnosis of the UNK group was based on a majority voting mechanism using an ensemble classifier with a hypothesis supposing each UNK individual were either BD or MDD due to total blind diagnosis prediction of our binary classification method. [Colour figure can be viewed at wileyonlinelibrary.com]
Demographic and clinical data of participant scans
| Group | BD | MDD | HC |
|
|
|
|---|---|---|---|---|---|---|
| Number | 32 | 34 | 33 | – | – | – |
| Age (mean ± SD)Range (years) | 21.3 ± 2.916–27 | 19.7 ± 2.616–25 | 20.2 ± 2.017–24 | 0.05 | 0.03 | 0.85 |
| Sex (M/F) | 16/16 | 10/24 | 13/20 | 0.23 | 0.09 | 0.96 |
The P value was obtained by analysis of variance (ANOVA) of BD&MDD&HC.
The P value was obtained by two‐sample two‐tailed t‐test of BD&MDD.
The P value was obtained by cross‐tabulation of BD&MDD&HC.
The P value was obtained by cross‐tabulation of BD&MDD.
The P values of age and sex were obtained by a multivariate analysis of covariance (MANCOVA) (Allen et al. 33).
Figure 2Classification Results. (a) The top line with error bars (1 standard deviation) shows classification rates achieved as a function of the total IC number used and illustrates that the optimal classification rate was achieved using five ICs. Yet using any number from 1 to 20 ICs for classification resulted in accuracy above 84%. (b) Frequency of the ICs as they occurred in 100 optimal combinations. We ran 10 times of 10‐fold nested cross‐validation. Each fold resulted in one optimal IC combination (selection and order of 20 ICs), yielding 100 combinations. This graph illustrates the ICs that were most contributory to the classification algorithm. (c) Spatial maps were overlaid with different colors, identical to those in (b). The sorting order of the five top selected ICs from high to low is 11, 6, 1, 16, and 2.
DIGS Mood and Other Diagnoses, Clinical Mood and other Diagnoses & Medication‐Class and Vote of Classifier Algorithm. Shaded cases were scanned on the same medication‐class as that to achieve euthymia; thus, unshaded cases held higher test validity of the classification algorithm
| ID | Age | Sex | DIGS Mood Dx | Chart Mood Dx on Entry | Other Chart Dx's on Entry | Rx at Scan | Rx of Response | Days between scan and final chart review | BD (%) | MDD (%) | Voting Results |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1308 | 22 | M | BD‐I | MDD | MJ dependence; PTSD | AD | AP | 212 | 63.2 | 36.8 | BD |
| 1310 | 20 | M | BD‐I | MDD | MJ dependence; PTSD | AD | AD | 1631 | 16.4 | 83.6 | MDD |
| 1322 | 24 | M | MDD | MDD | Panic d/o | None | MS,AP | 153 | 64.9 | 35.1 | BD |
| 1325 | 18 | F | None | n.a. | n.a. | None | n.a. | n.a. | 5.6 | 94.4 | MDD |
| 1349 | 21 | M | BD‐I | BD‐I | Alcohol dependence | MS | MS,AP | 1348 | 32.9 | 67.1 | MDD |
| 1364 | 19 | F | MDD | MDD vs. BD | None | MS | MS | 1025 | 63.6 | 36.4 | BD |
| 1368 | 19 | M | MDD | MDD vs. BD | None | MS | MS | 288 | 61.2 | 38.8 | BD |
| 1372 | 19 | M | BD‐II | None | Alcohol dependence; MJ dependence | None | None | 184 | 23.2 | 76.8 | MDD |
| 1378 | 26 | M | MDD | MDD vs. BD | None | AD | None | 275 | 45 | 55 | MDD |
| 1392 | 19 | F | BD‐II | MDD vs. BD | MJ dependence; PTSD | MS,AD | MS | 667 | 56.4 | 43.6 | BD |
| 1395 | 19 | F | MDD | MDD vs. BD | MJ dependence; PTSD | None | None | 532 | 28 | 72 | MDD |
| 1407 | 19 | M | BD‐II | MDD vs. BD | MJ dependence; PTSD | AD | AD | 377 | 17.4 | 82.6 | MDD |
Rx, medication; DIGS, Diagnostic Interview for Genetic Studies; Dx, diagnosis; d/o, disorder; PTSD, Posttraumatic Stress Disorder; MJ, Marijuana; AD, antidepressant; MS, mood stabilizer; AP, antipsychotic; n.a., not applicable.
The class of medication that was effective at the time the patient was stable, at the last time of evaluation as determined clinically and by chart review, to include only ADs, MSs, or APs.
This patient was ultimately diagnosed with schizoaffective disorder due to persistent paranoid ideation.
This patient was ultimately diagnosed with ADHD and GAD, but no mood disorder.