Literature DB >> 23231989

Multisubject independent component analysis of fMRI: a decade of intrinsic networks, default mode, and neurodiagnostic discovery.

Vince D Calhoun1, Tülay Adalı.   

Abstract

Since the discovery of functional connectivity in fMRI data (i.e., temporal correlations between spatially distinct regions of the brain) there has been a considerable amount of work in this field. One important focus has been on the analysis of brain connectivity using the concept of networks instead of regions. Approximately ten years ago, two important research areas grew out of this concept. First, a network proposed to be "a default mode of brain function" since dubbed the default mode network was proposed by Raichle. Secondly, multisubject or group independent component analysis (ICA) provided a data-driven approach to study properties of brain networks, including the default mode network. In this paper, we provide a focused review of how ICA has contributed to the study of intrinsic networks. We discuss some methodological considerations for group ICA and highlight multiple analytic approaches for studying brain networks. We also show examples of some of the differences observed in the default mode and resting networks in the diseased brain. In summary, we are in exciting times and still just beginning to reap the benefits of the richness of functional brain networks as well as available analytic approaches.

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Mesh:

Year:  2012        PMID: 23231989      PMCID: PMC4433055          DOI: 10.1109/RBME.2012.2211076

Source DB:  PubMed          Journal:  IEEE Rev Biomed Eng        ISSN: 1937-3333


  74 in total

1.  A method for making group inferences from functional MRI data using independent component analysis.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-11       Impact factor: 5.038

2.  Intrinsic connectivity networks, alpha oscillations, and tonic alertness: a simultaneous electroencephalography/functional magnetic resonance imaging study.

Authors:  Sepideh Sadaghiani; René Scheeringa; Katia Lehongre; Benjamin Morillon; Anne-Lise Giraud; Andreas Kleinschmidt
Journal:  J Neurosci       Date:  2010-07-28       Impact factor: 6.167

3.  Complex ICA by negentropy maximization.

Authors:  M Novey; T Adali
Journal:  IEEE Trans Neural Netw       Date:  2008-04

4.  Independent component analysis of fMRI data: examining the assumptions.

Authors:  M J McKeown; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

5.  Spatially independent activity patterns in functional MRI data during the stroop color-naming task.

Authors:  M J McKeown; T P Jung; S Makeig; G Brown; S S Kindermann; T W Lee; T J Sejnowski
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-03       Impact factor: 11.205

6.  On network derivation, classification, and visualization: a response to Habeck and Moeller.

Authors:  Erik B Erhardt; Elena A Allen; Eswar Damaraju; Vince D Calhoun
Journal:  Brain Connect       Date:  2011-06-08

7.  Comparison of multi-subject ICA methods for analysis of fMRI data.

Authors:  Erik Barry Erhardt; Srinivas Rachakonda; Edward J Bedrick; Elena A Allen; Tülay Adali; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2010-12-15       Impact factor: 5.038

8.  Modular Organization of Functional Network Connectivity in Healthy Controls and Patients with Schizophrenia during the Resting State.

Authors:  Qingbao Yu; Sergey M Plis; Erik B Erhardt; Elena A Allen; Jing Sui; Kent A Kiehl; Godfrey Pearlson; Vince D Calhoun
Journal:  Front Syst Neurosci       Date:  2012-01-10

9.  Exploring the psychosis functional connectome: aberrant intrinsic networks in schizophrenia and bipolar disorder.

Authors:  Vince D Calhoun; Jing Sui; Kent Kiehl; Jessica Turner; Elena Allen; Godfrey Pearlson
Journal:  Front Psychiatry       Date:  2012-01-10       Impact factor: 4.157

10.  Semiblind spatial ICA of fMRI using spatial constraints.

Authors:  Qiu-Hua Lin; Jingyu Liu; Yong-Rui Zheng; Hualou Liang; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2010-07       Impact factor: 5.038

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  223 in total

1.  Modeling task-based fMRI data via deep belief network with neural architecture search.

Authors:  Ning Qiang; Qinglin Dong; Wei Zhang; Bao Ge; Fangfei Ge; Hongtao Liang; Yifei Sun; Jie Gao; Tianming Liu
Journal:  Comput Med Imaging Graph       Date:  2020-06-06       Impact factor: 4.790

2.  Abnormal large-scale resting-state functional networks in drug-free major depressive disorder.

Authors:  Liang Luo; Huawang Wu; Jinping Xu; Fangfang Chen; Fengchun Wu; Chao Wang; Jiaojian Wang
Journal:  Brain Imaging Behav       Date:  2021-02       Impact factor: 3.978

3.  Regular cannabis and alcohol use is associated with resting-state time course power spectra in incarcerated adolescents.

Authors:  Sandra Thijssen; Barnaly Rashid; Shruti Gopal; Prashanth Nyalakanti; Vince D Calhoun; Kent A Kiehl
Journal:  Drug Alcohol Depend       Date:  2017-07-08       Impact factor: 4.492

4.  Transient Patterns of Functional Dysconnectivity in Clinical High Risk and Early Illness Schizophrenia Individuals Compared with Healthy Controls.

Authors:  Eva Mennigen; Susanna L Fryer; Barnaly Rashid; Eswar Damaraju; Yuhui Du; Rachel L Loewy; Barbara K Stuart; Vince D Calhoun; Daniel H Mathalon
Journal:  Brain Connect       Date:  2018-07-05

5.  Mind over motor mapping: Driver response to changing vehicle dynamics.

Authors:  Jennifer L Bruno; Joseph M Baker; Andrew Gundran; Lene K Harbott; Zachary Stuart; Aaron M Piccirilli; S M Hadi Hosseini; J Christian Gerdes; Allan L Reiss
Journal:  Hum Brain Mapp       Date:  2018-06-08       Impact factor: 5.038

6.  Transient increased thalamic-sensory connectivity and decreased whole-brain dynamism in autism.

Authors:  Zening Fu; Yiheng Tu; Xin Di; Yuhui Du; Jing Sui; Bharat B Biswal; Zhiguo Zhang; N de Lacy; V D Calhoun
Journal:  Neuroimage       Date:  2018-06-06       Impact factor: 6.556

7.  Partial recovery of abnormal insula and dorsolateral prefrontal connectivity to cognitive networks in chronic low back pain after treatment.

Authors:  Marta Čeko; Yoram Shir; Jean A Ouellet; Mark A Ware; Laura S Stone; David A Seminowicz
Journal:  Hum Brain Mapp       Date:  2015-02-03       Impact factor: 5.038

8.  Information flow between interacting human brains: Identification, validation, and relationship to social expertise.

Authors:  Edda Bilek; Matthias Ruf; Axel Schäfer; Ceren Akdeniz; Vince D Calhoun; Christian Schmahl; Charmaine Demanuele; Heike Tost; Peter Kirsch; Andreas Meyer-Lindenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

9.  Topographical Information-Based High-Order Functional Connectivity and Its Application in Abnormality Detection for Mild Cognitive Impairment.

Authors:  Han Zhang; Xiaobo Chen; Feng Shi; Gang Li; Minjeong Kim; Panteleimon Giannakopoulos; Sven Haller; Dinggang Shen
Journal:  J Alzheimers Dis       Date:  2016-10-04       Impact factor: 4.472

10.  Translational Meta-analytical Methods to Localize the Regulatory Patterns of Neurological Disorders in the Human Brain.

Authors:  Vanessa Sochat; Maude David; Dennis P Wall
Journal:  AMIA Annu Symp Proc       Date:  2015-11-05
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