Literature DB >> 32374075

Towards a brain-based predictome of mental illness.

Barnaly Rashid1, Vince Calhoun2.   

Abstract

Neuroimaging-based approaches have been extensively applied to study mental illness in recent years and have deepened our understanding of both cognitively healthy and disordered brain structure and function. Recent advancements in machine learning techniques have shown promising outcomes for individualized prediction and characterization of patients with psychiatric disorders. Studies have utilized features from a variety of neuroimaging modalities, including structural, functional, and diffusion magnetic resonance imaging data, as well as jointly estimated features from multiple modalities, to assess patients with heterogeneous mental disorders, such as schizophrenia and autism. We use the term "predictome" to describe the use of multivariate brain network features from one or more neuroimaging modalities to predict mental illness. In the predictome, multiple brain network-based features (either from the same modality or multiple modalities) are incorporated into a predictive model to jointly estimate features that are unique to a disorder and predict subjects accordingly. To date, more than 650 studies have been published on subject-level prediction focusing on psychiatric disorders. We have surveyed about 250 studies including schizophrenia, major depression, bipolar disorder, autism spectrum disorder, attention-deficit hyperactivity disorder, obsessive-compulsive disorder, social anxiety disorder, posttraumatic stress disorder, and substance dependence. In this review, we present a comprehensive review of recent neuroimaging-based predictomic approaches, current trends, and common shortcomings and share our vision for future directions.
© 2020 The Authors. Human Brain Mapping published by Wiley Periodicals, Inc.

Entities:  

Keywords:  functional magnetic resonance imaging; machine learning; multimodal studies; neuroimaging; psychiatric disorder

Mesh:

Year:  2020        PMID: 32374075      PMCID: PMC7375108          DOI: 10.1002/hbm.25013

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  401 in total

1.  Classification of structural images via high-dimensional image warping, robust feature extraction, and SVM.

Authors:  Yong Fan; Dinggang Shen; Christos Davatzikos
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

2.  Independent component analysis of resting state activity in pediatric obsessive-compulsive disorder.

Authors:  Patricia Gruner; An Vo; Miklos Argyelan; Toshikazu Ikuta; Andrew J Degnan; Majnu John; Bart D Peters; Anil K Malhotra; Aziz M Uluğ; Philip R Szeszko
Journal:  Hum Brain Mapp       Date:  2014-05-28       Impact factor: 5.038

Review 3.  Building better biomarkers: brain models in translational neuroimaging.

Authors:  Choong-Wan Woo; Luke J Chang; Martin A Lindquist; Tor D Wager
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

Review 4.  Machine learning classifiers and fMRI: a tutorial overview.

Authors:  Francisco Pereira; Tom Mitchell; Matthew Botvinick
Journal:  Neuroimage       Date:  2008-11-21       Impact factor: 6.556

5.  Combining various types of classifiers and features extracted from magnetic resonance imaging data in schizophrenia recognition.

Authors:  Eva Janousova; Daniel Schwarz; Tomas Kasparek
Journal:  Psychiatry Res       Date:  2015-03-20       Impact factor: 3.222

6.  Deep Independence Network Analysis of Structural Brain Imaging: Application to Schizophrenia.

Authors:  Eduardo Castro; R Devon Hjelm; Sergey M Plis; Laurent Dinh; Jessica A Turner; Vince D Calhoun
Journal:  IEEE Trans Med Imaging       Date:  2016-02-11       Impact factor: 10.048

7.  A method for multitask fMRI data fusion applied to schizophrenia.

Authors:  Vince D Calhoun; Tulay Adali; Kent A Kiehl; Robert Astur; James J Pekar; Godfrey D Pearlson
Journal:  Hum Brain Mapp       Date:  2006-07       Impact factor: 5.038

8.  An integrated feature ranking and selection framework for ADHD characterization.

Authors:  Cao Xiao; Jesse Bledsoe; Shouyi Wang; Wanpracha Art Chaovalitwongse; Sonya Mehta; Margaret Semrud-Clikeman; Thomas Grabowski
Journal:  Brain Inform       Date:  2016-04-02

9.  Subcortical volumes differentiate Major Depressive Disorder, Bipolar Disorder, and remitted Major Depressive Disorder.

Authors:  Matthew D Sacchet; Emily E Livermore; Juan Eugenio Iglesias; Gary H Glover; Ian H Gotlib
Journal:  J Psychiatr Res       Date:  2015-06-16       Impact factor: 4.791

10.  A multiple kernel learning approach to perform classification of groups from complex-valued fMRI data analysis: application to schizophrenia.

Authors:  Eduardo Castro; Vanessa Gómez-Verdejo; Manel Martínez-Ramón; Kent A Kiehl; Vince D Calhoun
Journal:  Neuroimage       Date:  2013-11-10       Impact factor: 6.556

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  19 in total

1.  Individual-specific networks for prediction modelling - A scoping review of methods.

Authors:  Mariella Gregorich; Federico Melograna; Martina Sunqvist; Stefan Michiels; Kristel Van Steen; Georg Heinze
Journal:  BMC Med Res Methodol       Date:  2022-03-06       Impact factor: 4.615

2.  Altered neural flexibility in children with attention-deficit/hyperactivity disorder.

Authors:  Weiyan Yin; Tengfei Li; Peter J Mucha; Jessica R Cohen; Hongtu Zhu; Ziliang Zhu; Weili Lin
Journal:  Mol Psychiatry       Date:  2022-07-22       Impact factor: 13.437

3.  Classification of Parkinson's disease using a region-of-interest- and resting-state functional magnetic resonance imaging-based radiomics approach.

Authors:  Dafa Shi; Xiang Yao; Yanfei Li; Haoran Zhang; Guangsong Wang; Siyuan Wang; Ke Ren
Journal:  Brain Imaging Behav       Date:  2022-06-01       Impact factor: 3.224

Review 4.  Predicting the future of neuroimaging predictive models in mental health.

Authors:  Link Tejavibulya; Max Rolison; Siyuan Gao; Qinghao Liang; Hannah Peterson; Javid Dadashkarimi; Michael C Farruggia; C Alice Hahn; Stephanie Noble; Sarah D Lichenstein; Angeliki Pollatou; Alexander J Dufford; Dustin Scheinost
Journal:  Mol Psychiatry       Date:  2022-06-13       Impact factor: 13.437

5.  Machine Learning Identifies Metabolic Signatures that Predict the Risk of Recurrent Angina in Remitted Patients after Percutaneous Coronary Intervention: A Multicenter Prospective Cohort Study.

Authors:  Song Cui; Li Li; Yongjiang Zhang; Jianwei Lu; Xiuzhen Wang; Xiantao Song; Jinghua Liu; Kefeng Li
Journal:  Adv Sci (Weinh)       Date:  2021-03-08       Impact factor: 16.806

Review 6.  Data-driven approaches to neuroimaging biomarkers for neurological and psychiatric disorders: emerging approaches and examples.

Authors:  Vince D Calhoun; Godfrey D Pearlson; Jing Sui
Journal:  Curr Opin Neurol       Date:  2021-08-01       Impact factor: 6.283

7.  Multimodal MRI assessment for first episode psychosis: A major change in the thalamus and an efficient stratification of a subgroup.

Authors:  Andreia V Faria; Yi Zhao; Chenfei Ye; Johnny Hsu; Kun Yang; Elizabeth Cifuentes; Lei Wang; Susumu Mori; Michael Miller; Brian Caffo; Akira Sawa
Journal:  Hum Brain Mapp       Date:  2020-12-30       Impact factor: 5.399

8.  Towards a brain-based predictome of mental illness.

Authors:  Barnaly Rashid; Vince Calhoun
Journal:  Hum Brain Mapp       Date:  2020-05-06       Impact factor: 5.038

9.  At the Crossroads Between Psychiatry and Machine Learning: Insights Into Paradigms and Challenges for Clinical Applicability.

Authors:  Sarah Itani; Mandy Rossignol
Journal:  Front Psychiatry       Date:  2020-09-24       Impact factor: 4.157

Review 10.  Brain imaging-based machine learning in autism spectrum disorder: methods and applications.

Authors:  Ming Xu; Vince Calhoun; Rongtao Jiang; Weizheng Yan; Jing Sui
Journal:  J Neurosci Methods       Date:  2021-06-24       Impact factor: 2.390

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