Literature DB >> 19172631

A method for accurate group difference detection by constraining the mixing coefficients in an ICA framework.

Jing Sui1, Tülay Adali, Godfrey D Pearlson, Vincent P Clark, Vince D Calhoun.   

Abstract

Independent component analysis (ICA) is a promising method that is increasingly used to analyze brain imaging data such as functional magnetic resonance imaging (fMRI), structural MRI, and electroencephalography and has also proved useful for group comparison, e.g., differentiating healthy controls from patients. An advantage of ICA is its ability to identify components that are mixed in an unknown manner. However, ICA is not necessarily robust and optimal in identifying between-group effects, especially in highly noisy situations. Here, we propose a modified ICA framework for multigroup data analysis that incorporates prior information regarding group membership as a constraint into the mixing coefficients. Our approach, called coefficient-constrained ICA (CC-ICA), prioritizes identification of components that show a significant group difference. The performance of CC-ICA via synthetic and hybrid data simulations is evaluated under different hypothesis testing assumptions and signal to noise ratios (SNRs). Group analysis is also conducted on real multitask fMRI data. Results show that CC-ICA improves the estimation accuracy of the independent components greatly, especially those that have different patterns for different groups (e.g., patients vs. controls); In addition, it enhances the data extraction sensitivity to group differences by ranking components with P value or J-divergence more consistently with the ground truth. The proposed algorithm performs quite well for both group-difference detection and multitask fMRI data fusion, which may prove especially important for the identification of relevant disease biomarkers. 2009 Wiley-Liss, Inc.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19172631      PMCID: PMC2733923          DOI: 10.1002/hbm.20721

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  42 in total

1.  A general statistical analysis for fMRI data.

Authors:  K J Worsley; C H Liao; J Aston; V Petre; G H Duncan; F Morales; A C Evans
Journal:  Neuroimage       Date:  2002-01       Impact factor: 6.556

2.  Multivariate analysis of neuronal interactions in the generalized partial least squares framework: simulations and empirical studies.

Authors:  Fa-Hsuan Lin; Anthony R McIntosh; John A Agnew; Guinevere F Eden; Thomas A Zeffiro; John W Belliveau
Journal:  Neuroimage       Date:  2003-10       Impact factor: 6.556

3.  Approach and applications of constrained ICA.

Authors:  Wei Lu; Jagath C Rajapakse
Journal:  IEEE Trans Neural Netw       Date:  2005-01

4.  Semi-blind ICA of fMRI: A method for utilizing hypothesis-derived time courses in a spatial ICA analysis.

Authors:  V D Calhoun; T Adali; M C Stevens; K A Kiehl; J J Pekar
Journal:  Neuroimage       Date:  2005-04-01       Impact factor: 6.556

5.  Transmodal sensorimotor networks during action observation in professional pianists.

Authors:  B Haslinger; P Erhard; E Altenmüller; U Schroeder; H Boecker; A O Ceballos-Baumann
Journal:  J Cogn Neurosci       Date:  2005-02       Impact factor: 3.225

6.  Estimating the number of independent components for functional magnetic resonance imaging data.

Authors:  Yi-Ou Li; Tülay Adali; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2007-11       Impact factor: 5.038

7.  Independent vector analysis (IVA): multivariate approach for fMRI group study.

Authors:  Jong-Hwan Lee; Te-Won Lee; Ferenc A Jolesz; Seung-Schik Yoo
Journal:  Neuroimage       Date:  2007-11-28       Impact factor: 6.556

8.  Abnormal object recall and anterior cingulate overactivation correlate with formal thought disorder in schizophrenia.

Authors:  Michal Assaf; Paul R Rivkin; Cheedem H Kuzu; Vince D Calhoun; Michael A Kraut; Karyn M Groth; Michael A Yassa; John Hart; Godfrey D Pearlson
Journal:  Biol Psychiatry       Date:  2005-09-30       Impact factor: 13.382

9.  Test-retest reliability of a functional MRI working memory paradigm in normal and schizophrenic subjects.

Authors:  D S Manoach; E F Halpern; T S Kramer; Y Chang; D C Goff; S L Rauch; D N Kennedy; R L Gollub
Journal:  Am J Psychiatry       Date:  2001-06       Impact factor: 18.112

10.  Method for multimodal analysis of independent source differences in schizophrenia: combining gray matter structural and auditory oddball functional data.

Authors:  V D Calhoun; T Adali; N R Giuliani; J J Pekar; K A Kiehl; G D Pearlson
Journal:  Hum Brain Mapp       Date:  2006-01       Impact factor: 5.038

View more
  22 in total

1.  Unbiased group-level statistical assessment of independent component maps by means of automated retrospective matching.

Authors:  Dave R M Langers
Journal:  Hum Brain Mapp       Date:  2010-05       Impact factor: 5.038

2.  Extracting intrinsic functional networks with feature-based group independent component analysis.

Authors:  Vince D Calhoun; Elena Allen
Journal:  Psychometrika       Date:  2012-10-02       Impact factor: 2.500

3.  MRI patterns of atrophy and hypoperfusion associations across brain regions in frontotemporal dementia.

Authors:  Duygu Tosun; Howard Rosen; Bruce L Miller; Michael W Weiner; Norbert Schuff
Journal:  Neuroimage       Date:  2011-10-20       Impact factor: 6.556

4.  Independent Component Analysis Involving Autocorrelated Sources With an Application to Functional Magnetic Resonance Imaging.

Authors:  Seonjoo Lee; Haipeng Shen; Young Truong; Mechelle Lewis; Xuemei Huang
Journal:  J Am Stat Assoc       Date:  2012-01-24       Impact factor: 5.033

5.  Resting-state functional connectivity differences in premature children.

Authors:  Eswar Damaraju; John R Phillips; Jean R Lowe; Robin Ohls; Vince D Calhoun; Arvind Caprihan
Journal:  Front Syst Neurosci       Date:  2010-06-17

6.  A Hybrid Machine Learning Method for Fusing fMRI and Genetic Data: Combining both Improves Classification of Schizophrenia.

Authors:  Honghui Yang; Jingyu Liu; Jing Sui; Godfrey Pearlson; Vince D Calhoun
Journal:  Front Hum Neurosci       Date:  2010-10-25       Impact factor: 3.169

Review 7.  A review of multivariate methods for multimodal fusion of brain imaging data.

Authors:  Jing Sui; Tülay Adali; Qingbao Yu; Jiayu Chen; Vince D Calhoun
Journal:  J Neurosci Methods       Date:  2011-11-11       Impact factor: 2.390

8.  A CCA+ICA based model for multi-task brain imaging data fusion and its application to schizophrenia.

Authors:  Jing Sui; Tülay Adali; Godfrey Pearlson; Honghui Yang; Scott R Sponheim; Tonya White; Vince D Calhoun
Journal:  Neuroimage       Date:  2010-01-28       Impact factor: 6.556

9.  Functional brain networks in schizophrenia: a review.

Authors:  Vince D Calhoun; Tom Eichele; Godfrey Pearlson
Journal:  Front Hum Neurosci       Date:  2009-08-17       Impact factor: 3.169

10.  An ICA-based method for the identification of optimal FMRI features and components using combined group-discriminative techniques.

Authors:  Jing Sui; Tülay Adali; Godfrey D Pearlson; Vince D Calhoun
Journal:  Neuroimage       Date:  2009-02-10       Impact factor: 6.556

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.